RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 FBXO33Q7Z6M2 555 aa19.1■□□□□ 0.65
TREX1-201ENST00000433541 TDRD7Q8NHU6 1098 aaKnown RBP19.1■□□□□ 0.65
TREX1-201ENST00000433541 EXOC6Q8TAG9 804 aa19.1■□□□□ 0.65
TREX1-201ENST00000433541 XAGE2Q96GT9 111 aa19.1■□□□□ 0.65
TREX1-201ENST00000433541 FPGT-TNNI3KV9GXZ4 949 aa19.1■□□□□ 0.65
TREX1-201ENST00000433541 SHTN1A0MZ66 631 aa19.09■□□□□ 0.65
TREX1-201ENST00000433541 F8W031 263 aaPredicted RBP19.09■□□□□ 0.65
TREX1-201ENST00000433541 CENPBP07199 599 aaPredicted RBP19.09■□□□□ 0.65
TREX1-201ENST00000433541 USP17L8P0C7I0 530 aa19.09■□□□□ 0.65
TREX1-201ENST00000433541 KIAA0825Q8IV33 1275 aa19.09■□□□□ 0.65
TREX1-201ENST00000433541 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
TREX1-201ENST00000433541 HDAC9Q9UKV0 1011 aa19.09■□□□□ 0.65
TREX1-201ENST00000433541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.09■□□□□ 0.65
TREX1-201ENST00000433541 PHKA1P46020 1223 aa19.08■□□□□ 0.64
TREX1-201ENST00000433541 TBC1D10BQ4KMP7 808 aaPredicted RBP19.08■□□□□ 0.64
TREX1-201ENST00000433541 MFSD14BQ5SR56 506 aa19.08■□□□□ 0.64
TREX1-201ENST00000433541 CCDC102BQ68D86 513 aa19.08■□□□□ 0.64
TREX1-201ENST00000433541 KIF1BPQ96EK5 621 aa19.08■□□□□ 0.64
TREX1-201ENST00000433541 RAB11FIP3O75154 756 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 AAMPQ13685 434 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 CCDC158Q5M9N0 1113 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 TTC39AQ5SRH9 613 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 USP50Q70EL3 339 aaPredicted RBP19.07■□□□□ 0.64
TREX1-201ENST00000433541 SAMD7Q7Z3H4 446 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 AACSQ86V21 672 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 LDHDQ86WU2 507 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 CLASRPQ8N2M8 674 aaKnown RBP19.07■□□□□ 0.64
TREX1-201ENST00000433541 SMC1BQ8NDV3 1235 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 RBM46Q8TBY0 533 aaKnown RBP19.07■□□□□ 0.64
TREX1-201ENST00000433541 RHPN1Q8TCX5 695 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 GPR108Q9NPR9 543 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
TREX1-201ENST00000433541 PCDHB15Q9Y5E8 787 aa19.07■□□□□ 0.64
TREX1-201ENST00000433541 POTEIP0CG38 1075 aa19.06■□□□□ 0.64
TREX1-201ENST00000433541 POTEJP0CG39 1038 aa19.06■□□□□ 0.64
TREX1-201ENST00000433541 KIF4BQ2VIQ3 1234 aa19.06■□□□□ 0.64
TREX1-201ENST00000433541 TBC1D22AQ8WUA7 517 aa19.06■□□□□ 0.64
TREX1-201ENST00000433541 CCDC8Q9H0W5 538 aaPredicted RBP19.06■□□□□ 0.64
TREX1-201ENST00000433541 FAM205AQ6ZU69 1335 aa19.05■□□□□ 0.64
TREX1-201ENST00000433541 IFIT2P09913 472 aaKnown RBP19.05■□□□□ 0.64
TREX1-201ENST00000433541 RBM5P52756 815 aaKnown RBP eCLIP19.05■□□□□ 0.64
TREX1-201ENST00000433541 CHADLQ6NUI6 762 aa19.05■□□□□ 0.64
TREX1-201ENST00000433541 TRPM4Q8TD43 1214 aa19.05■□□□□ 0.64
TREX1-201ENST00000433541 DBNDD2Q9BQY9 259 aa19.05■□□□□ 0.64
TREX1-201ENST00000433541 LRRCC1Q9C099 1032 aa19.05■□□□□ 0.64
TREX1-201ENST00000433541 DENND2AQ9ULE3 1009 aa19.05■□□□□ 0.64
TREX1-201ENST00000433541 POLR2AP24928 1970 aaKnown RBP19.04■□□□□ 0.64
TREX1-201ENST00000433541 SEMA3EO15041 775 aa19.04■□□□□ 0.64
TREX1-201ENST00000433541 CERS5Q8N5B7 392 aa19.04■□□□□ 0.64
TREX1-201ENST00000433541 WDR66Q8TBY9 1149 aa19.04■□□□□ 0.64
TREX1-201ENST00000433541 MYOZ2Q9NPC6 264 aa19.04■□□□□ 0.64
TREX1-201ENST00000433541 UQCRFS1P1P0C7P4 283 aa19.03■□□□□ 0.64
TREX1-201ENST00000433541 C1QTNF8P60827 252 aa19.03■□□□□ 0.64
TREX1-201ENST00000433541 FKBP1AP62942 108 aaKnown RBP19.03■□□□□ 0.64
TREX1-201ENST00000433541 EAF2Q96CJ1 260 aaPredicted RBP19.03■□□□□ 0.64
TREX1-201ENST00000433541 GMLQ99445 158 aa19.03■□□□□ 0.64
TREX1-201ENST00000433541 TTF2Q9UNY4 1162 aaKnown RBP19.03■□□□□ 0.64
TREX1-201ENST00000433541 ADAMTSL1Q8N6G6 1762 aa19.02■□□□□ 0.64
TREX1-201ENST00000433541 RASGRF1Q13972 1273 aa19.02■□□□□ 0.64
TREX1-201ENST00000433541 MAP1SQ66K74 1059 aaPredicted RBP19.02■□□□□ 0.64
TREX1-201ENST00000433541 TLR7Q9NYK1 1049 aaKnown RBP19.02■□□□□ 0.64
TREX1-201ENST00000433541 ABCF2Q9UG63 623 aa19.02■□□□□ 0.64
TREX1-201ENST00000433541 SMARCA5O60264 1052 aaPredicted RBP19.01■□□□□ 0.63
TREX1-201ENST00000433541 EGFRP00533 1210 aa19.01■□□□□ 0.63
TREX1-201ENST00000433541 ZNF280AP59817 542 aaPredicted RBP19.01■□□□□ 0.63
TREX1-201ENST00000433541 FSTL1Q12841 308 aa19.01■□□□□ 0.63
TREX1-201ENST00000433541 DLGAP5Q15398 846 aa19.01■□□□□ 0.63
TREX1-201ENST00000433541 DBNLQ9UJU6 430 aaKnown RBP19.01■□□□□ 0.63
TREX1-201ENST00000433541 ECM29Q5VYK3 1845 aa19.01■□□□□ 0.63
TREX1-201ENST00000433541 COL1A1P02452 1464 aaPredicted RBP19.01■□□□□ 0.63
TREX1-201ENST00000433541 MAST3O60307 1309 aa19■□□□□ 0.63
TREX1-201ENST00000433541 MMP14P50281 582 aa19■□□□□ 0.63
TREX1-201ENST00000433541 ZGPATQ8N5A5 531 aaKnown RBP19■□□□□ 0.63
TREX1-201ENST00000433541 SPATA5Q8NB90 893 aa19■□□□□ 0.63
TREX1-201ENST00000433541 DCPSQ96C86 337 aaKnown RBP19■□□□□ 0.63
TREX1-201ENST00000433541 RWDD1Q9H446 243 aaPredicted RBP19■□□□□ 0.63
TREX1-201ENST00000433541 DCTPP1Q9H773 170 aa19■□□□□ 0.63
TREX1-201ENST00000433541 LDHBP07195 334 aaKnown RBP18.99■□□□□ 0.63
TREX1-201ENST00000433541 NEFLP07196 543 aa18.99■□□□□ 0.63
TREX1-201ENST00000433541 ARID4AP29374 1257 aaPredicted RBP18.99■□□□□ 0.63
TREX1-201ENST00000433541 HIRAP54198 1017 aaPredicted RBP18.99■□□□□ 0.63
TREX1-201ENST00000433541 SCARF1Q14162 830 aa18.99■□□□□ 0.63
TREX1-201ENST00000433541 SNRKQ9NRH2 765 aa18.99■□□□□ 0.63
TREX1-201ENST00000433541 GGA3Q9NZ52 723 aa18.99■□□□□ 0.63
TREX1-201ENST00000433541 MYH2Q9UKX2 1941 aa18.99■□□□□ 0.63
TREX1-201ENST00000433541 MYO1BO43795 1136 aa18.98■□□□□ 0.63
TREX1-201ENST00000433541 CFAP100Q494V2 611 aa18.98■□□□□ 0.63
TREX1-201ENST00000433541 SPTY2D1Q68D10 685 aaPredicted RBP18.98■□□□□ 0.63
TREX1-201ENST00000433541 PI16Q6UXB8 463 aa18.98■□□□□ 0.63
TREX1-201ENST00000433541 DZIP1Q86YF9 867 aaKnown RBP18.98■□□□□ 0.63
TREX1-201ENST00000433541 CNTROBQ8N137 903 aa18.98■□□□□ 0.63
TREX1-201ENST00000433541 ZC3H15Q8WU90 426 aaKnown RBP18.98■□□□□ 0.63
TREX1-201ENST00000433541 HMG20BQ9P0W2 317 aa18.98■□□□□ 0.63
TREX1-201ENST00000433541 AKAP11Q9UKA4 1901 aa18.98■□□□□ 0.63
TREX1-201ENST00000433541 MCAMP43121 646 aa18.97■□□□□ 0.63
TREX1-201ENST00000433541 HDAC1Q13547 482 aaPredicted RBP18.97■□□□□ 0.63
TREX1-201ENST00000433541 NBPF9Q3BBW0 867 aa18.97■□□□□ 0.63
TREX1-201ENST00000433541 ANGEL2Q5VTE6 544 aaKnown RBP18.97■□□□□ 0.63
TREX1-201ENST00000433541 TEKT1Q969V4 418 aa18.97■□□□□ 0.63
TREX1-201ENST00000433541 GPATCH3Q96I76 525 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms