RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 NAPBQ9H115 298 aa11.78□□□□□ -0.52
PKNOX1-203ENST00000432907 ZC3H6P61129 1189 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-203ENST00000432907 PSME1Q06323 249 aa11.78□□□□□ -0.52
PKNOX1-203ENST00000432907 SNCBQ16143 134 aa11.78□□□□□ -0.52
PKNOX1-203ENST00000432907 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-203ENST00000432907 SMARCC2Q8TAQ2 1214 aa11.78□□□□□ -0.52
PKNOX1-203ENST00000432907 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
PKNOX1-203ENST00000432907 LEO1Q8WVC0 666 aaPredicted RBP11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 XPO4Q9C0E2 1151 aaKnown RBP11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 FAM114A2Q9NRY5 505 aa11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 GIGYF1O75420 1035 aaPredicted RBP11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 AMPD3Q01432 767 aa11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 ATL3Q6DD88 541 aa11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 ANKRD24Q8TF21 1146 aa11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 FAM204AQ9H8W3 233 aa11.77□□□□□ -0.52
PKNOX1-203ENST00000432907 PSMA7O14818 248 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 RPSAP08865 295 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 ZNF853P0CG23 659 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 MAGEA9P43362 315 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 ZNF530Q6P9A1 599 aaPredicted RBP11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 FBXO38Q6PIJ6 1188 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 SPAG5Q96R06 1193 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 A2MP01023 1474 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 NLRP5P59047 1200 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 NCBP1Q09161 790 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 TCERG1LQ5VWI1 586 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 DHX58Q96C10 678 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 CHAMP1Q96JM3 812 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 UBA5Q9GZZ9 404 aa11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 PPANQ9NQ55 473 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-203ENST00000432907 CCDC194A0A1B0GVG4 234 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 KRT13P13646 458 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 MMS22LQ6ZRQ5 1243 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 MMRN2Q9H8L6 949 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 LOC102724159A0A0B4J2E5 919 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 PTPDC1A2A3K4 754 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 ALDH3A1P30838 453 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 PWP2Q15269 919 aaKnown RBP11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 PPP1R7Q15435 360 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 NCOA7Q8NI08 942 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 GNL3LQ9NVN8 582 aaKnown RBP11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 GNAT3A8MTJ3 354 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 PPFIA4O75335 1185 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 CLCN6P51797 869 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 IFT20Q8IY31 132 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 N4BP2L2Q92802 583 aaPredicted RBP11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 ANKRD18BA2A2Z9 1011 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 ABCA8O94911 1581 aa11.76□□□□□ -0.53
PKNOX1-203ENST00000432907 CHD1O14646 1710 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 HGSO14964 777 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 PPP1R14CQ8TAE6 165 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 RABGGTAQ92696 567 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 DDX12PQ92771 950 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 MRFAP1L1Q96HT8 127 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 NRBP1Q9UHY1 535 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 MTX1Q13505 466 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 LONRF2Q1L5Z9 754 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 GRIPAP1Q4V328 841 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 TRIM68Q6AZZ1 485 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 RAB34Q9BZG1 259 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 TSGA10Q9BZW7 698 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 IKBKGQ9Y6K9 419 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 SPTY2D1Q68D10 685 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 CYP26C1Q6V0L0 522 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 CCDC170Q8IYT3 715 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 EXOC1Q9NV70 894 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 TRAPPC8Q9Y2L5 1435 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 SF3A3Q12874 501 aaKnown RBP eCLIP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 ANKLE2Q86XL3 938 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 OTUD7AQ8TE49 926 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 MTRF1LQ9UGC7 380 aaKnown RBP11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 FAN1Q9Y2M0 1017 aa11.75□□□□□ -0.53
PKNOX1-203ENST00000432907 MINDY4BA8MYZ0 360 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 PNMA6AP0CW24 399 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 E2F5Q15329 346 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 VSIG1Q86XK7 387 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 RNF10Q8N5U6 811 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 GBP5Q96PP8 586 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 SEPT14Q6ZU15 432 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 BRAPQ7Z569 592 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 LRRC45Q96CN5 670 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 IQCGQ9H095 443 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 SUDS3Q9H7L9 328 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 ATP1A2P50993 1020 aa11.74□□□□□ -0.53
PKNOX1-203ENST00000432907 CEP128Q6ZU80 1094 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms