RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 VAMP4O75379 141 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 KIF4BQ2VIQ3 1234 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 RSBN1LQ6PCB5 846 aaPredicted RBP12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 DLK2Q6UY11 383 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 USP48Q86UV5 1035 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 AGBL3Q8NEM8 1001 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 DNAAF4Q8WXU2 420 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 GMLQ99445 158 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ZNF408Q9H9D4 720 aa12.03□□□□□ -0.48
CDC42-IT1-201ENST00000431803 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.48
CDC42-IT1-201ENST00000431803 AOC2O75106 756 aa12.02□□□□□ -0.49
CDC42-IT1-201ENST00000431803 EXOSC9Q06265 439 aaKnown RBP12.02□□□□□ -0.49
CDC42-IT1-201ENST00000431803 GRM1Q13255 1194 aa12.02□□□□□ -0.49
CDC42-IT1-201ENST00000431803 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
CDC42-IT1-201ENST00000431803 MYH16Q9H6N6 1097 aa12.02□□□□□ -0.49
CDC42-IT1-201ENST00000431803 USP17L3A6NCW0 530 aa12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 USP17L4A6NCW7 530 aa12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ADM5C9JUS6 153 aa12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 CSF1RP07333 972 aa12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 FAM161AQ3B820 660 aa12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 RBM26Q5T8P6 1007 aaKnown RBP12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 USP17L1Q7RTZ2 530 aa12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 DCPSQ96C86 337 aaKnown RBP12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 GGA3Q9NZ52 723 aa12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ASTN2O75129 1339 aaPredicted RBP12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
CDC42-IT1-201ENST00000431803 USP17L8P0C7I0 530 aa12□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ITGA6P23229 1130 aa12□□□□□ -0.49
CDC42-IT1-201ENST00000431803 IGHMBP2P38935 993 aaKnown RBP12□□□□□ -0.49
CDC42-IT1-201ENST00000431803 HUNKP57058 714 aa12□□□□□ -0.49
CDC42-IT1-201ENST00000431803 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
CDC42-IT1-201ENST00000431803 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
CDC42-IT1-201ENST00000431803 CA12O43570 354 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 NOGQ13253 232 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 DACT2Q5SW24 774 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 BEND3Q5T5X7 828 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 TXNRD3Q86VQ6 643 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 SULF1Q8IWU6 871 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 GBA2Q9HCG7 927 aaPredicted RBP11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 MYOZ2Q9NPC6 264 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 PITPNM2Q9BZ72 1349 aa11.99□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ZNF804BA4D1E1 1349 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 FAM155AB1AL88 458 aaPredicted RBP11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 F6X3S4 739 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 KLRK1P26718 216 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 EMP3P54852 163 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 FOXO4P98177 505 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 SCARF1Q14162 830 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 STRIP1Q5VSL9 837 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ANGEL2Q5VTE6 544 aaKnown RBP11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 C2orf69Q8N8R5 385 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ANKRD2Q9GZV1 360 aa11.98□□□□□ -0.49
CDC42-IT1-201ENST00000431803 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 IRS2Q9Y4H2 1338 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 RGMBQ6NW40 437 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 CDCA5Q96FF9 252 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 MPHOSPH8Q99549 860 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
CDC42-IT1-201ENST00000431803 ANKRD18BA2A2Z9 1011 aa11.96□□□□□ -0.49
CDC42-IT1-201ENST00000431803 CHRNDQ07001 517 aa11.96□□□□□ -0.49
CDC42-IT1-201ENST00000431803 FAM9BQ8IZU0 186 aa11.96□□□□□ -0.49
CDC42-IT1-201ENST00000431803 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
CDC42-IT1-201ENST00000431803 MXD3Q9BW11 206 aa11.96□□□□□ -0.49
CDC42-IT1-201ENST00000431803 PAPPA2Q9BXP8 1791 aa11.96□□□□□ -0.49
CDC42-IT1-201ENST00000431803 GRM8O00222 908 aa11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 MMP14P50281 582 aa11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 FKBP1BP68106 108 aa11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 IFIT5Q13325 482 aaKnown RBP11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 NBPF9Q3BBW0 867 aa11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 EPHA10Q5JZY3 1008 aa11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 C15orf52Q6ZUT6 534 aaKnown RBP11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 OGFOD1Q8N543 542 aa11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
CDC42-IT1-201ENST00000431803 WNT10BO00744 389 aa11.94□□□□□ -0.5
CDC42-IT1-201ENST00000431803 SLC10A3P09131 477 aa11.94□□□□□ -0.5
CDC42-IT1-201ENST00000431803 ZNF157P51786 506 aaPredicted RBP11.94□□□□□ -0.5
CDC42-IT1-201ENST00000431803 TTLL5Q6EMB2 1281 aa11.94□□□□□ -0.5
CDC42-IT1-201ENST00000431803 ABHD8Q96I13 439 aa11.94□□□□□ -0.5
CDC42-IT1-201ENST00000431803 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
CDC42-IT1-201ENST00000431803 SNAP23O00161 211 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 TAF5LO75529 589 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 ALDH1L1O75891 902 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 KCNJ4P48050 445 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 LMBR1LQ6UX01 489 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 FBXW7Q969H0 707 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 ZBED3Q96IU2 234 aaPredicted RBP11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 CD209Q9NNX6 404 aa11.93□□□□□ -0.5
CDC42-IT1-201ENST00000431803 SAGE1Q9NXZ1 904 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms