RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 NMRK2Q9NPI5 230 aa22.64■■□□□ 1.21
RFTN1-202ENST00000431547 DBNLQ9UJU6 430 aaKnown RBP22.64■■□□□ 1.21
RFTN1-202ENST00000431547 MYO3BQ8WXR4 1341 aa22.63■■□□□ 1.21
RFTN1-202ENST00000431547 IQCA1LA6NCM1 817 aa22.63■■□□□ 1.21
RFTN1-202ENST00000431547 NEFLP07196 543 aa22.63■■□□□ 1.21
RFTN1-202ENST00000431547 GPRC5DQ9NZD1 345 aa22.63■■□□□ 1.21
RFTN1-202ENST00000431547 LMOD1P29536 600 aaPredicted RBP22.62■■□□□ 1.21
RFTN1-202ENST00000431547 CCDC158Q5M9N0 1113 aa22.62■■□□□ 1.21
RFTN1-202ENST00000431547 SMC5Q8IY18 1101 aa22.62■■□□□ 1.21
RFTN1-202ENST00000431547 ZNF512BQ96KM6 892 aaPredicted RBP22.62■■□□□ 1.21
RFTN1-202ENST00000431547 MXD3Q9BW11 206 aa22.62■■□□□ 1.21
RFTN1-202ENST00000431547 TLR7Q9NYK1 1049 aaKnown RBP22.62■■□□□ 1.21
RFTN1-202ENST00000431547 HACL1Q9UJ83 578 aa22.62■■□□□ 1.21
RFTN1-202ENST00000431547 DENND2AQ9ULE3 1009 aa22.62■■□□□ 1.21
RFTN1-202ENST00000431547 SMARCA5O60264 1052 aaPredicted RBP22.61■■□□□ 1.21
RFTN1-202ENST00000431547 IFIT2P09913 472 aaKnown RBP22.61■■□□□ 1.21
RFTN1-202ENST00000431547 UQCRFS1P1P0C7P4 283 aa22.61■■□□□ 1.21
RFTN1-202ENST00000431547 ARID4AP29374 1257 aaPredicted RBP22.61■■□□□ 1.21
RFTN1-202ENST00000431547 WDR90Q96KV7 1748 aa22.61■■□□□ 1.21
RFTN1-202ENST00000431547 CNOT7Q9UIV1 285 aaKnown RBP22.61■■□□□ 1.21
RFTN1-202ENST00000431547 PDS5AQ29RF7 1337 aaKnown RBP22.6■■□□□ 1.21
RFTN1-202ENST00000431547 CHAF1AQ13111 956 aaPredicted RBP22.6■■□□□ 1.21
RFTN1-202ENST00000431547 CERS5Q8N5B7 392 aa22.6■■□□□ 1.21
RFTN1-202ENST00000431547 WDR66Q8TBY9 1149 aa22.6■■□□□ 1.21
RFTN1-202ENST00000431547 TBC1D22AQ8WUA7 517 aa22.6■■□□□ 1.21
RFTN1-202ENST00000431547 JAG2Q9Y219 1238 aa22.6■■□□□ 1.21
RFTN1-202ENST00000431547 SCN9AQ15858 1988 aa22.59■■□□□ 1.21
RFTN1-202ENST00000431547 EPS15P42566 896 aa22.59■■□□□ 1.21
RFTN1-202ENST00000431547 MMP14P50281 582 aa22.59■■□□□ 1.21
RFTN1-202ENST00000431547 RASGRF1Q13972 1273 aa22.59■■□□□ 1.21
RFTN1-202ENST00000431547 MFSD14BQ5SR56 506 aa22.59■■□□□ 1.21
RFTN1-202ENST00000431547 TTC39AQ5SRH9 613 aa22.59■■□□□ 1.21
RFTN1-202ENST00000431547 TAF1DQ9H5J8 278 aaPredicted RBP22.59■■□□□ 1.21
RFTN1-202ENST00000431547 ARAP2Q8WZ64 1704 aa22.59■■□□□ 1.21
RFTN1-202ENST00000431547 H7C1D1 291 aa22.58■■□□□ 1.21
RFTN1-202ENST00000431547 USP17L8P0C7I0 530 aa22.58■■□□□ 1.21
RFTN1-202ENST00000431547 EPHX2P34913 555 aa22.58■■□□□ 1.21
RFTN1-202ENST00000431547 ZNF280AP59817 542 aaPredicted RBP22.58■■□□□ 1.21
RFTN1-202ENST00000431547 ANKRD45Q5TZF3 282 aa22.58■■□□□ 1.21
RFTN1-202ENST00000431547 MICALL2Q8IY33 904 aa22.58■■□□□ 1.21
RFTN1-202ENST00000431547 KIF3CO14782 793 aa22.57■■□□□ 1.2
RFTN1-202ENST00000431547 BCL11AQ9H165 835 aa22.57■■□□□ 1.2
RFTN1-202ENST00000431547 ADARB2Q9NS39 739 aaKnown RBP22.57■■□□□ 1.2
RFTN1-202ENST00000431547 HMG20BQ9P0W2 317 aa22.57■■□□□ 1.2
RFTN1-202ENST00000431547 SALL1Q9NSC2 1324 aa22.57■■□□□ 1.2
RFTN1-202ENST00000431547 COL1A1P02452 1464 aaPredicted RBP22.56■■□□□ 1.2
RFTN1-202ENST00000431547 MCAMP43121 646 aa22.56■■□□□ 1.2
RFTN1-202ENST00000431547 KIAA0825Q8IV33 1275 aa22.56■■□□□ 1.2
RFTN1-202ENST00000431547 OGFOD1Q8N543 542 aa22.56■■□□□ 1.2
RFTN1-202ENST00000431547 SPATA5Q8NB90 893 aa22.56■■□□□ 1.2
RFTN1-202ENST00000431547 ZBTB47Q9UFB7 747 aaPredicted RBP22.56■■□□□ 1.2
RFTN1-202ENST00000431547 SUGT1Q9Y2Z0 365 aa22.56■■□□□ 1.2
RFTN1-202ENST00000431547 SHTN1A0MZ66 631 aa22.55■■□□□ 1.2
RFTN1-202ENST00000431547 SCARF1Q14162 830 aa22.55■■□□□ 1.2
RFTN1-202ENST00000431547 USP50Q70EL3 339 aaPredicted RBP22.55■■□□□ 1.2
RFTN1-202ENST00000431547 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
RFTN1-202ENST00000431547 HDAC9Q9UKV0 1011 aa22.54■■□□□ 1.2
RFTN1-202ENST00000431547 PSME4Q14997 1843 aa22.54■■□□□ 1.2
RFTN1-202ENST00000431547 NUCB1Q02818 461 aa22.53■■□□□ 1.2
RFTN1-202ENST00000431547 PI16Q6UXB8 463 aa22.53■■□□□ 1.2
RFTN1-202ENST00000431547 ZGPATQ8N5A5 531 aaKnown RBP22.53■■□□□ 1.2
RFTN1-202ENST00000431547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.53■■□□□ 1.2
RFTN1-202ENST00000431547 ATP5JP18859 108 aa22.52■■□□□ 1.2
RFTN1-202ENST00000431547 GRIK5Q16478 980 aa22.52■■□□□ 1.2
RFTN1-202ENST00000431547 ERICH6BQ5W0A0 696 aa22.52■■□□□ 1.2
RFTN1-202ENST00000431547 B4GALNT3Q6L9W6 998 aa22.52■■□□□ 1.2
RFTN1-202ENST00000431547 SAMD7Q7Z3H4 446 aa22.52■■□□□ 1.2
RFTN1-202ENST00000431547 C16orf71Q8IYS4 520 aaPredicted RBP22.52■■□□□ 1.2
RFTN1-202ENST00000431547 MYOZ2Q9NPC6 264 aa22.52■■□□□ 1.2
RFTN1-202ENST00000431547 ZNF646O15015 1829 aaPredicted RBP22.52■■□□□ 1.2
RFTN1-202ENST00000431547 F8W031 263 aaPredicted RBP22.51■■□□□ 1.19
RFTN1-202ENST00000431547 CHD1LQ86WJ1 897 aa22.51■■□□□ 1.19
RFTN1-202ENST00000431547 MRIQ9BWK5 157 aa22.51■■□□□ 1.19
RFTN1-202ENST00000431547 SNRKQ9NRH2 765 aa22.51■■□□□ 1.19
RFTN1-202ENST00000431547 ECHDC1Q9NTX5 307 aa22.51■■□□□ 1.19
RFTN1-202ENST00000431547 TTF2Q9UNY4 1162 aaKnown RBP22.51■■□□□ 1.19
RFTN1-202ENST00000431547 SCN4AP35499 1836 aa22.51■■□□□ 1.19
RFTN1-202ENST00000431547 LDHBP07195 334 aaKnown RBP22.5■■□□□ 1.19
RFTN1-202ENST00000431547 ZAP70P43403 619 aa22.5■■□□□ 1.19
RFTN1-202ENST00000431547 HIRAP54198 1017 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-202ENST00000431547 HDLBPQ00341 1268 aaKnown RBP22.5■■□□□ 1.19
RFTN1-202ENST00000431547 TBC1D10BQ4KMP7 808 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-202ENST00000431547 EAPPQ56P03 285 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-202ENST00000431547 SPTY2D1Q68D10 685 aaPredicted RBP22.5■■□□□ 1.19
RFTN1-202ENST00000431547 MTMR14Q8NCE2 650 aa22.5■■□□□ 1.19
RFTN1-202ENST00000431547 TRPM4Q8TD43 1214 aa22.5■■□□□ 1.19
RFTN1-202ENST00000431547 GPATCH3Q96I76 525 aa22.5■■□□□ 1.19
RFTN1-202ENST00000431547 TOMM70O94826 608 aa22.49■■□□□ 1.19
RFTN1-202ENST00000431547 EGFRP00533 1210 aa22.49■■□□□ 1.19
RFTN1-202ENST00000431547 CYP2E1P05181 493 aaPredicted RBP22.49■■□□□ 1.19
RFTN1-202ENST00000431547 PRDX5P30044 214 aa22.49■■□□□ 1.19
RFTN1-202ENST00000431547 KIF4BQ2VIQ3 1234 aa22.49■■□□□ 1.19
RFTN1-202ENST00000431547 RBM26Q5T8P6 1007 aaKnown RBP22.49■■□□□ 1.19
RFTN1-202ENST00000431547 ABCF2Q9UG63 623 aa22.49■■□□□ 1.19
RFTN1-202ENST00000431547 SERPINA10Q9UK55 444 aa22.49■■□□□ 1.19
RFTN1-202ENST00000431547 MAST3O60307 1309 aa22.49■■□□□ 1.19
RFTN1-202ENST00000431547 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
RFTN1-202ENST00000431547 LDHDQ86WU2 507 aa22.48■■□□□ 1.19
RFTN1-202ENST00000431547 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
RFTN1-202ENST00000431547 ZC3H15Q8WU90 426 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms