RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
ATG4B-212ENST00000430617 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
ATG4B-212ENST00000430617 MYO3BQ8WXR4 1341 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-212ENST00000430617 GJA8P48165 433 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 FAM43AQ8N2R8 423 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 OPTNQ96CV9 577 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 ZFYVE28Q9HCC9 887 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 MTMR10Q9NXD2 777 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
ATG4B-212ENST00000430617 MED23Q9ULK4 1368 aa12.97□□□□□ -0.33
ATG4B-212ENST00000430617 AOX1Q06278 1338 aa12.97□□□□□ -0.33
ATG4B-212ENST00000430617 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
ATG4B-212ENST00000430617 ATP2B4P23634 1241 aa12.97□□□□□ -0.33
ATG4B-212ENST00000430617 CTGFP29279 349 aa12.97□□□□□ -0.33
ATG4B-212ENST00000430617 LACTBP83111 547 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-212ENST00000430617 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
ATG4B-212ENST00000430617 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
ATG4B-212ENST00000430617 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
ATG4B-212ENST00000430617 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-212ENST00000430617 ELP3Q9H9T3 547 aa12.97□□□□□ -0.33
ATG4B-212ENST00000430617 APAF1O14727 1248 aa12.96□□□□□ -0.33
ATG4B-212ENST00000430617 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-212ENST00000430617 CCL5P13501 91 aa12.96□□□□□ -0.33
ATG4B-212ENST00000430617 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
ATG4B-212ENST00000430617 ANKRD13AQ8IZ07 590 aa12.96□□□□□ -0.33
ATG4B-212ENST00000430617 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
ATG4B-212ENST00000430617 MAPK8IP3Q9UPT6 1336 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 CCL15-CCL14A0A0B4J2E2 113 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 GJB1P08034 283 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 IREB2P48200 963 aaKnown RBP12.95□□□□□ -0.34
ATG4B-212ENST00000430617 CCL15Q16663 113 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 PRDM6Q9NQX0 595 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
ATG4B-212ENST00000430617 ZNF804BA4D1E1 1349 aa12.94□□□□□ -0.34
ATG4B-212ENST00000430617 CLRN2A0PK11 232 aa12.94□□□□□ -0.34
ATG4B-212ENST00000430617 EVI5O60447 810 aa12.94□□□□□ -0.34
ATG4B-212ENST00000430617 FARP2O94887 1054 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-212ENST00000430617 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
ATG4B-212ENST00000430617 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
ATG4B-212ENST00000430617 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
ATG4B-212ENST00000430617 JARID2Q92833 1246 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-212ENST00000430617 RNF208Q9H0X6 261 aa12.94□□□□□ -0.34
ATG4B-212ENST00000430617 PNNQ9H307 717 aaKnown RBP12.94□□□□□ -0.34
ATG4B-212ENST00000430617 TLR2O60603 784 aa12.93□□□□□ -0.34
ATG4B-212ENST00000430617 KLRK1P26718 216 aa12.93□□□□□ -0.34
ATG4B-212ENST00000430617 MMP14P50281 582 aa12.93□□□□□ -0.34
ATG4B-212ENST00000430617 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
ATG4B-212ENST00000430617 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
ATG4B-212ENST00000430617 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-212ENST00000430617 U2AF1L4Q8WU68 220 aaKnown RBP12.93□□□□□ -0.34
ATG4B-212ENST00000430617 GDF15Q99988 308 aa12.93□□□□□ -0.34
ATG4B-212ENST00000430617 PPP2R3BQ9Y5P8 575 aa12.93□□□□□ -0.34
ATG4B-212ENST00000430617 GNRH1P01148 92 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 GRK4P32298 578 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 BMP8BP34820 402 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
ATG4B-212ENST00000430617 BCAMP50895 628 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 PRMT2P55345 433 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 GTF2IP78347 998 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
ATG4B-212ENST00000430617 KIF22Q14807 665 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
ATG4B-212ENST00000430617 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 CERS5Q8N5B7 392 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-212ENST00000430617 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
ATG4B-212ENST00000430617 TRIM47Q96LD4 638 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 COA1Q9GZY4 146 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 SRRDQ9UH36 339 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 MINPP1Q9UNW1 487 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
ATG4B-212ENST00000430617 CCT4P50991 539 aaKnown RBP12.91□□□□□ -0.34
ATG4B-212ENST00000430617 GTF2A2P52657 109 aa12.91□□□□□ -0.34
ATG4B-212ENST00000430617 RASA3Q14644 834 aa12.91□□□□□ -0.34
ATG4B-212ENST00000430617 MTMR14Q8NCE2 650 aa12.91□□□□□ -0.34
ATG4B-212ENST00000430617 UNC93B1Q9H1C4 597 aa12.91□□□□□ -0.34
ATG4B-212ENST00000430617 VEZTQ9HBM0 779 aa12.91□□□□□ -0.34
ATG4B-212ENST00000430617 AK9Q5TCS8 1911 aa12.91□□□□□ -0.34
ATG4B-212ENST00000430617 TTC28Q96AY4 2481 aa12.9□□□□□ -0.34
ATG4B-212ENST00000430617 OSBPP22059 807 aa12.9□□□□□ -0.34
ATG4B-212ENST00000430617 PSMC4P43686 418 aa12.9□□□□□ -0.34
ATG4B-212ENST00000430617 VGLL4Q14135 290 aa12.9□□□□□ -0.34
ATG4B-212ENST00000430617 LRIT3Q3SXY7 679 aa12.9□□□□□ -0.34
ATG4B-212ENST00000430617 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
ATG4B-212ENST00000430617 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
ATG4B-212ENST00000430617 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-212ENST00000430617 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 BTBD19C9JJ37 291 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-212ENST00000430617 PDE8AO60658 829 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 SGPL1O95470 568 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms