RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 ZNF713Q8N859 430 aaPredicted RBP6.75□□□□□ -1.33
UBR3-204ENST00000430321 TEKT1Q969V4 418 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 NUP62CLQ9H1M0 184 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 BCS1LQ9Y276 419 aa6.75□□□□□ -1.33
UBR3-204ENST00000430321 KDM2BQ8NHM5 1336 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 BICDL2A1A5D9 508 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 ZBTB43O43298 467 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 NEMFO60524 1076 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 BBOX1O75936 387 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 FERP16591 822 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 SSR1P43307 286 aaKnown RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 EIF4A2Q14240 407 aaKnown RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 KRT79Q5XKE5 535 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 HS2ST1Q7LGA3 356 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 KIAA1328Q86T90 577 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 CLIP2Q9UDT6 1046 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 SYNMO15061 1565 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 PZPP20742 1482 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 XPOTO43592 962 aaKnown RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 ATF7P17544 494 aaPredicted RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 EAPPQ56P03 285 aaPredicted RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 C2orf69Q8N8R5 385 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 UPF3BQ9BZI7 483 aaKnown RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 BOLA2Q9H3K6 86 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 CWC15Q9P013 229 aaKnown RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 TICAM2Q86XR7 235 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 LMBR1Q8WVP7 490 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 NOX5Q96PH1 765 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 METTL22Q9BUU2 404 aaPredicted RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 SYNCQ9H7C4 482 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 MBIPQ9NS73 344 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 SWAP70Q9UH65 585 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 INSRP06213 1382 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 PI4KAP2A4QPH2 592 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 FAM13AO94988 1023 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 PI4KAP1Q8N8J0 262 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 LPIN2Q92539 896 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 NEK1Q96PY6 1258 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 MIS12Q9H081 205 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 DDX19AQ9NUU7 478 aaKnown RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 BSDC1Q9NW68 430 aaPredicted RBP6.74□□□□□ -1.33
UBR3-204ENST00000430321 USP25Q9UHP3 1055 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 LIMCH1Q9UPQ0 1083 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 COMMD10Q9Y6G5 202 aa6.74□□□□□ -1.33
UBR3-204ENST00000430321 CHD1O14646 1710 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 POTEB2H3BUK9 544 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 PICALMQ13492 652 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 CCDC155Q8N6L0 562 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 UBA5Q9GZZ9 404 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 GZF1Q9H116 711 aaPredicted RBP6.73□□□□□ -1.33
UBR3-204ENST00000430321 ARPP21Q9UBL0 812 aaPredicted RBP6.73□□□□□ -1.33
UBR3-204ENST00000430321 IBTKQ9P2D0 1353 aaPredicted RBP6.73□□□□□ -1.33
UBR3-204ENST00000430321 ATP8B2P98198 1209 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 CDC42BPGQ6DT37 1551 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 ZCCHC11Q5TAX3 1644 aaKnown RBP6.73□□□□□ -1.33
UBR3-204ENST00000430321 STRN3Q13033 797 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 TMEM87BQ96K49 555 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 MYOM2P54296 1465 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 CLASP1Q7Z460 1538 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 ARHGAP31Q2M1Z3 1444 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 NCOA3Q9Y6Q9 1424 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 ERVK-7P63135 1459 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 MRPS9P82933 396 aaKnown RBP6.73□□□□□ -1.33
UBR3-204ENST00000430321 CLUL1Q15846 466 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 MAP9Q49MG5 647 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 FAM160B1Q5W0V3 765 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 OTUD6AQ7L8S5 288 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 TMEM57Q8N5G2 664 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 STX8Q9UNK0 236 aa6.73□□□□□ -1.33
UBR3-204ENST00000430321 NUTM1Q86Y26 1132 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 BBXQ8WY36 941 aaPredicted RBP6.72□□□□□ -1.33
UBR3-204ENST00000430321 PPM1EQ8WY54 764 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 AP5M1Q9H0R1 490 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 SPINK5Q9NQ38 1064 aaPredicted RBP6.72□□□□□ -1.33
UBR3-204ENST00000430321 PAG1Q9NWQ8 432 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 NCAPD2Q15021 1401 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 SHTN1A0MZ66 631 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 NPR1P16066 1061 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 MRE11P49959 708 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 ZNF790Q6PG37 636 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 KRT26Q7Z3Y9 468 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 CCDC17Q96LX7 622 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 IL1RAPL2Q9NP60 686 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 MCM9Q9NXL9 1143 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 CHPF2Q9P2E5 772 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 MRPL11Q9Y3B7 192 aaKnown RBP6.72□□□□□ -1.33
UBR3-204ENST00000430321 USP16Q9Y5T5 823 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 BACH1O14867 736 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 IBSPP21815 317 aaPredicted RBP6.72□□□□□ -1.33
UBR3-204ENST00000430321 LMBR1LQ6UX01 489 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 KIFAP3Q92845 792 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 MAP7D2Q96T17 732 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 ADD3Q9UEY8 706 aaKnown RBP6.72□□□□□ -1.33
UBR3-204ENST00000430321 F8W8V4 182 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 KRT2P35908 639 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 PRPF40BQ6NWY9 871 aaKnown RBP6.72□□□□□ -1.33
UBR3-204ENST00000430321 PPP2R3CQ969Q6 453 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 SPON1Q9HCB6 807 aa6.72□□□□□ -1.33
UBR3-204ENST00000430321 hCG_1984214I3L0E3 225 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms