RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
HDAC4-202ENST00000430200 VGLL2Q8N8G2 317 aa14.91□□□□□ -0.02
HDAC4-202ENST00000430200 PTPRCP08575 1304 aa14.91□□□□□ -0.02
HDAC4-202ENST00000430200 CENPFP49454 3210 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 GYG1P46976 350 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 NOGQ13253 232 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 GRIK5Q16478 980 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 CNNM1Q9NRU3 951 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 RIPOR2Q9Y4F9 1068 aa14.9□□□□□ -0.02
HDAC4-202ENST00000430200 F8W031 263 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-202ENST00000430200 KIF23Q02241 960 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-202ENST00000430200 C2orf69Q8N8R5 385 aa14.89□□□□□ -0.03
HDAC4-202ENST00000430200 RFX5P48382 616 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-202ENST00000430200 ZNF157P51786 506 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-202ENST00000430200 TAF7LQ5H9L4 462 aa14.88□□□□□ -0.03
HDAC4-202ENST00000430200 SMC4Q9NTJ3 1288 aa14.88□□□□□ -0.03
HDAC4-202ENST00000430200 UBE2Q2LH0YL09 131 aa14.87□□□□□ -0.03
HDAC4-202ENST00000430200 ZNF804AQ7Z570 1209 aa14.87□□□□□ -0.03
HDAC4-202ENST00000430200 CDAN1Q8IWY9 1227 aa14.87□□□□□ -0.03
HDAC4-202ENST00000430200 FAM84BQ96KN1 310 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-202ENST00000430200 TNNQ9UQP3 1299 aa14.87□□□□□ -0.03
HDAC4-202ENST00000430200 FAM205AQ6ZU69 1335 aa14.87□□□□□ -0.03
HDAC4-202ENST00000430200 CLRN2A0PK11 232 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 CCER2I3L3R5 266 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 ALDH1L2Q3SY69 923 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 OGFOD1Q8N543 542 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 TDRD7Q8NHU6 1098 aaKnown RBP14.86□□□□□ -0.03
HDAC4-202ENST00000430200 ABHD8Q96I13 439 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 IQSEC3Q9UPP2 1182 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-202ENST00000430200 ZSWIM8A7E2V4 1837 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 DOCK2Q92608 1830 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 BRCA2P51587 3418 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
HDAC4-202ENST00000430200 MYO5AQ9Y4I1 1855 aaKnown RBP14.85□□□□□ -0.03
HDAC4-202ENST00000430200 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 PRKG1Q13976 671 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 UBE4AQ14139 1066 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 CFAP100Q494V2 611 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 MTMR14Q8NCE2 650 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 PRMT6Q96LA8 375 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-202ENST00000430200 CSRNP1Q96S65 589 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 BEGAINQ9BUH8 593 aa14.85□□□□□ -0.03
HDAC4-202ENST00000430200 APOBEC3FQ8IUX4 373 aaKnown RBP14.84□□□□□ -0.03
HDAC4-202ENST00000430200 RNF186Q9NXI6 227 aa14.84□□□□□ -0.03
HDAC4-202ENST00000430200 MROH5Q6ZUA9 1318 aa14.84□□□□□ -0.03
HDAC4-202ENST00000430200 FGFR2P21802 821 aa14.83□□□□□ -0.04
HDAC4-202ENST00000430200 FKBP1AP62942 108 aaKnown RBP14.83□□□□□ -0.04
HDAC4-202ENST00000430200 FKBP1BP68106 108 aa14.83□□□□□ -0.04
HDAC4-202ENST00000430200 PTPN12Q05209 780 aaKnown RBP14.83□□□□□ -0.04
HDAC4-202ENST00000430200 MKRN3Q13064 507 aaKnown RBP14.83□□□□□ -0.04
HDAC4-202ENST00000430200 DLGAP5Q15398 846 aa14.83□□□□□ -0.04
HDAC4-202ENST00000430200 MFSD14BQ5SR56 506 aa14.83□□□□□ -0.04
HDAC4-202ENST00000430200 ATG9AQ7Z3C6 839 aa14.83□□□□□ -0.04
HDAC4-202ENST00000430200 CCDC102AQ96A19 550 aa14.83□□□□□ -0.04
HDAC4-202ENST00000430200 HDAC9Q9UKV0 1011 aa14.83□□□□□ -0.04
HDAC4-202ENST00000430200 NOB1Q9ULX3 412 aaKnown RBP14.83□□□□□ -0.04
HDAC4-202ENST00000430200 CDK5RAP2Q96SN8 1893 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 CA12O43570 354 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 TRPA1O75762 1119 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 HIBADHP31937 336 aaKnown RBP14.82□□□□□ -0.04
HDAC4-202ENST00000430200 RARSP54136 660 aaKnown RBP14.82□□□□□ -0.04
HDAC4-202ENST00000430200 METTL24Q5JXM2 366 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 FBXO33Q7Z6M2 555 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 CLMNQ96JQ2 1002 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 MEIS3Q99687 375 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 MCOLN1Q9GZU1 580 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 DEFB129Q9H1M3 183 aa14.82□□□□□ -0.04
HDAC4-202ENST00000430200 PDE8BO95263 885 aa14.81□□□□□ -0.04
HDAC4-202ENST00000430200 LDLRAD1Q5T700 205 aa14.81□□□□□ -0.04
HDAC4-202ENST00000430200 SAGE1Q9NXZ1 904 aa14.81□□□□□ -0.04
HDAC4-202ENST00000430200 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
HDAC4-202ENST00000430200 MAST2Q6P0Q8 1798 aa14.8□□□□□ -0.04
HDAC4-202ENST00000430200 AK9Q5TCS8 1911 aa14.8□□□□□ -0.04
HDAC4-202ENST00000430200 BCAMP50895 628 aa14.8□□□□□ -0.04
HDAC4-202ENST00000430200 CHAF1AQ13111 956 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-202ENST00000430200 TTLL12Q14166 644 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-202ENST00000430200 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
HDAC4-202ENST00000430200 NBPF12Q5TAG4 269 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-202ENST00000430200 VEZTQ9HBM0 779 aa14.8□□□□□ -0.04
HDAC4-202ENST00000430200 PA2G4Q9UQ80 394 aaKnown RBP14.8□□□□□ -0.04
HDAC4-202ENST00000430200 LRRFIP2Q9Y608 721 aaKnown RBP14.8□□□□□ -0.04
HDAC4-202ENST00000430200 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-202ENST00000430200 EYA2O00167 538 aa14.79□□□□□ -0.04
HDAC4-202ENST00000430200 PTPRFP10586 1907 aa14.79□□□□□ -0.04
HDAC4-202ENST00000430200 GJA5P36382 358 aa14.79□□□□□ -0.04
HDAC4-202ENST00000430200 MMP14P50281 582 aa14.79□□□□□ -0.04
HDAC4-202ENST00000430200 TEPSINQ96N21 525 aa14.79□□□□□ -0.04
HDAC4-202ENST00000430200 SIL1Q9H173 461 aa14.79□□□□□ -0.04
HDAC4-202ENST00000430200 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
HDAC4-202ENST00000430200 TDRD3Q9H7E2 651 aaKnown RBP14.79□□□□□ -0.04
HDAC4-202ENST00000430200 ANGEL1Q9UNK9 670 aaKnown RBP14.79□□□□□ -0.04
HDAC4-202ENST00000430200 MKI67P46013 3256 aaKnown RBP14.79□□□□□ -0.04
HDAC4-202ENST00000430200 CRKP46108 304 aa14.78□□□□□ -0.04
HDAC4-202ENST00000430200 CACNB3P54284 484 aa14.78□□□□□ -0.04
HDAC4-202ENST00000430200 RASA3Q14644 834 aa14.78□□□□□ -0.04
HDAC4-202ENST00000430200 PUM3Q15397 648 aaKnown RBP14.78□□□□□ -0.04
HDAC4-202ENST00000430200 ZNF70Q9UC06 446 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms