RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ESYT1Q9BSJ8 1104 aa15.08■□□□□ 0
PTCH1-207ENST00000429896 STX8Q9UNK0 236 aa15.08■□□□□ 0
PTCH1-207ENST00000429896 GYG1P46976 350 aa15.08■□□□□ 0
PTCH1-207ENST00000429896 MCM5P33992 734 aa15.08■□□□□ 0
PTCH1-207ENST00000429896 MFSD14BQ5SR56 506 aa15.08■□□□□ 0
PTCH1-207ENST00000429896 AOX1Q06278 1338 aa15.07■□□□□ 0
PTCH1-207ENST00000429896 NFKBIBQ15653 356 aa15.07■□□□□ 0
PTCH1-207ENST00000429896 RAD50Q92878 1312 aa15.07■□□□□ 0
PTCH1-207ENST00000429896 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
PTCH1-207ENST00000429896 TMEM132AQ24JP5 1023 aa15.07■□□□□ 0
PTCH1-207ENST00000429896 SAP30BPQ9UHR5 308 aaKnown RBP15.07■□□□□ 0
PTCH1-207ENST00000429896 STK38Q15208 465 aa15.07■□□□□ 0
PTCH1-207ENST00000429896 ZNF408Q9H9D4 720 aa15.07■□□□□ 0
PTCH1-207ENST00000429896 SSRP1Q08945 709 aaKnown RBP15.07■□□□□ 0
PTCH1-207ENST00000429896 MEGF6O75095 1541 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 CCDC171Q6TFL3 1326 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 IBSPP21815 317 aaPredicted RBP15.06■□□□□ 0
PTCH1-207ENST00000429896 CT47A1Q5JQC4 288 aaPredicted RBP15.06■□□□□ 0
PTCH1-207ENST00000429896 WTAPQ15007 396 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 EHMT1Q9H9B1 1298 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 SH2B1Q9NRF2 756 aaPredicted RBP15.06■□□□□ 0
PTCH1-207ENST00000429896 TTF2Q9UNY4 1162 aaKnown RBP15.06■□□□□ 0
PTCH1-207ENST00000429896 RBM8AQ9Y5S9 174 aaKnown RBP15.06■□□□□ 0
PTCH1-207ENST00000429896 ZAP70P43403 619 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 PDILTQ8N807 584 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 DDX11Q96FC9 970 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 COPRSQ9NQ92 184 aa15.06■□□□□ 0
PTCH1-207ENST00000429896 ADGRB2O60241 1585 aa15.05■□□□□ 0
PTCH1-207ENST00000429896 BCAMP50895 628 aa15.05■□□□□ 0
PTCH1-207ENST00000429896 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ 0
PTCH1-207ENST00000429896 ARMT1Q9H993 441 aa15.05■□□□□ 0
PTCH1-207ENST00000429896 H7C1W4 665 aa15.05■□□□□ 0
PTCH1-207ENST00000429896 CCDC70Q6NSX1 233 aa15.05■□□□□ 0
PTCH1-207ENST00000429896 JMYQ8N9B5 988 aa15.05■□□□□ 0
PTCH1-207ENST00000429896 TEKT1Q969V4 418 aa15.05■□□□□ 0
PTCH1-207ENST00000429896 PDE8BO95263 885 aa15.05■□□□□ -0
PTCH1-207ENST00000429896 HSP90AA2PQ14568 343 aaPredicted RBP15.05■□□□□ -0
PTCH1-207ENST00000429896 CNTNAP4Q9C0A0 1308 aa15.05■□□□□ -0
PTCH1-207ENST00000429896 PUS3Q9BZE2 481 aaKnown RBP15.05■□□□□ -0
PTCH1-207ENST00000429896 AATFQ9NY61 560 aaKnown RBP eCLIP15.05■□□□□ -0
PTCH1-207ENST00000429896 KIF20BQ96Q89 1820 aa15.05■□□□□ -0
PTCH1-207ENST00000429896 SLC15A2Q16348 729 aa15.05■□□□□ -0
PTCH1-207ENST00000429896 CCDC83Q8IWF9 413 aa15.05■□□□□ -0
PTCH1-207ENST00000429896 TMTC2Q8N394 836 aa15.05■□□□□ -0
PTCH1-207ENST00000429896 NFIXQ14938 502 aa15.04■□□□□ -0
PTCH1-207ENST00000429896 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
PTCH1-207ENST00000429896 PICK1Q9NRD5 415 aa15.04■□□□□ -0
PTCH1-207ENST00000429896 CCDC102BQ68D86 513 aa15.04■□□□□ -0
PTCH1-207ENST00000429896 DHX37Q8IY37 1157 aaKnown RBP15.04■□□□□ -0
PTCH1-207ENST00000429896 VAT1LQ9HCJ6 419 aa15.04■□□□□ -0
PTCH1-207ENST00000429896 ITPK1Q13572 414 aa15.04■□□□□ -0
PTCH1-207ENST00000429896 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
PTCH1-207ENST00000429896 NBPF26B4DH59 902 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 ODF2Q5BJF6 829 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 NBPF10Q6P3W6 841 aaKnown RBP15.03■□□□□ -0
PTCH1-207ENST00000429896 NBPF15Q8N660 670 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 WDR33Q9C0J8 1336 aaKnown RBP15.03■□□□□ -0
PTCH1-207ENST00000429896 TNS2Q63HR2 1409 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 DEFB132Q7Z7B7 95 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 APPBP2Q92624 585 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 BSDC1Q9NW68 430 aaPredicted RBP15.03■□□□□ -0
PTCH1-207ENST00000429896 POLR1AO95602 1720 aaPredicted RBP15.03■□□□□ -0
PTCH1-207ENST00000429896 CEBPZQ03701 1054 aaKnown RBP15.03■□□□□ -0
PTCH1-207ENST00000429896 C21orf2O43822 256 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 ATP5JP18859 108 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 METAP2P50579 478 aaKnown RBP eCLIP15.03■□□□□ -0
PTCH1-207ENST00000429896 TNFAIP1Q13829 316 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 SH2D4AQ9H788 454 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 LIMCH1Q9UPQ0 1083 aa15.03■□□□□ -0
PTCH1-207ENST00000429896 KRT18P05783 430 aaKnown RBP15.02■□□□□ -0
PTCH1-207ENST00000429896 EPS15P42566 896 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 CCDC144CPQ8IYA2 1237 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 CDHR2Q9BYE9 1310 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 SEMA3EO15041 775 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 IPO7O95373 1038 aaKnown RBP15.02■□□□□ -0
PTCH1-207ENST00000429896 PDIA4P13667 645 aaKnown RBP15.02■□□□□ -0
PTCH1-207ENST00000429896 GRIPAP1Q4V328 841 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 MICU3Q86XE3 530 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 TTLL11Q8NHH1 800 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 USP40Q9NVE5 1235 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 FAM13BQ9NYF5 915 aa15.02■□□□□ -0
PTCH1-207ENST00000429896 KBTBD3Q8NAB2 608 aa15.02□□□□□ -0.01
PTCH1-207ENST00000429896 TAOK3Q9H2K8 898 aa15.02□□□□□ -0.01
PTCH1-207ENST00000429896 OTUD7AQ8TE49 926 aaPredicted RBP15.02□□□□□ -0.01
PTCH1-207ENST00000429896 GPR108Q9NPR9 543 aa15.02□□□□□ -0.01
PTCH1-207ENST00000429896 CCT2P78371 535 aaKnown RBP15.01□□□□□ -0.01
PTCH1-207ENST00000429896 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-207ENST00000429896 EIF5P55010 431 aaKnown RBP15.01□□□□□ -0.01
PTCH1-207ENST00000429896 TRAF1Q13077 416 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 SMIM5Q71RC9 77 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 MPHOSPH6Q99547 160 aaKnown RBP15.01□□□□□ -0.01
PTCH1-207ENST00000429896 KIAA0825Q8IV33 1275 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 CHMLP26374 656 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 NLRP5P59047 1200 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
PTCH1-207ENST00000429896 DBNDD1Q9H9R9 158 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 ZNF532Q9HCE3 1301 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 BRIP1Q9BX63 1249 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 KNDC1Q76NI1 1749 aa15.01□□□□□ -0.01
PTCH1-207ENST00000429896 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms