RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 KCNQ2O43526 872 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
ATXN3-204ENST00000429774 CBX1P83916 185 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 NLGN1Q8N2Q7 840 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 TGFBRAP1Q8WUH2 860 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 GREM2Q9H772 168 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 DCTPP1Q9H773 170 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 HMG20BQ9P0W2 317 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 RDXP35241 583 aaKnown RBP8.22□□□□□ -1.09
ATXN3-204ENST00000429774 SYCP1Q15431 976 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 TCP10L2B9ZVM9 353 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 H7C1D1 291 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 RTN1Q16799 776 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 FILIP1LQ4L180 1135 aa8.22□□□□□ -1.09
ATXN3-204ENST00000429774 ZBTB43O43298 467 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 TMEM266Q2M3C6 531 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 SMIM5Q71RC9 77 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 GPCPD1Q9NPB8 672 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.09
ATXN3-204ENST00000429774 KIF20BQ96Q89 1820 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 PSDA5PKW4 1024 aaPredicted RBP8.21□□□□□ -1.09
ATXN3-204ENST00000429774 SERPINC1P01008 464 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 ZAP70P43403 619 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 BCAMP50895 628 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 OTUD7AQ8TE49 926 aaPredicted RBP8.21□□□□□ -1.09
ATXN3-204ENST00000429774 MPHOSPH6Q99547 160 aaKnown RBP8.21□□□□□ -1.09
ATXN3-204ENST00000429774 PRC1O43663 620 aa8.21□□□□□ -1.09
ATXN3-204ENST00000429774 CCDC12Q8WUD4 166 aaPredicted RBP8.21□□□□□ -1.09
ATXN3-204ENST00000429774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.093e-6■■□□□ 13.5
ATXN3-204ENST00000429774 BIN2Q9UBW5 565 aaPredicted RBP8.21□□□□□ -1.09
ATXN3-204ENST00000429774 CRB1P82279 1406 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 CPSF1Q10570 1443 aaKnown RBP8.21□□□□□ -1.1
ATXN3-204ENST00000429774 CHRNDQ07001 517 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 LRRC24Q50LG9 513 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 SPC24Q8NBT2 197 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 WDR66Q8TBY9 1149 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 BRF1Q92994 677 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 TMOD4Q9NZQ9 345 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 CCDC171Q6TFL3 1326 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 PLEKHM2Q8IWE5 1019 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 TRIM5Q9C035 493 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 GRPEL1Q9HAV7 217 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 ORC3Q9UBD5 711 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-204ENST00000429774 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
ATXN3-204ENST00000429774 MAPKAPK5Q8IW41 473 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 ATG3Q9NT62 314 aa8.21□□□□□ -1.1
ATXN3-204ENST00000429774 SEPT11Q9NVA2 429 aaKnown RBP8.21□□□□□ -1.1
ATXN3-204ENST00000429774 HEG1Q9ULI3 1381 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 CALM1P0DP23 149 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 CALM2P0DP24 149 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 CALM3P0DP25 149 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 SSFA2P28290 1259 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 ARGLU1Q9NWB6 273 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-204ENST00000429774 NAPAP54920 295 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 APOBRQ0VD83 1088 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 DLGAP5Q15398 846 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 CKAP2LQ8IYA6 745 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 C3P01024 1663 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 CCDC178Q5BJE1 867 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 USP40Q9NVE5 1235 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 IQGAP1P46940 1657 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 IL6STP40189 918 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-204ENST00000429774 SEC31BQ9NQW1 1179 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 MAP2P11137 1827 aaKnown RBP8.2□□□□□ -1.1
ATXN3-204ENST00000429774 PTPRUQ92729 1446 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 RRP36Q96EU6 259 aaKnown RBP8.2□□□□□ -1.1
ATXN3-204ENST00000429774 GPR101Q96P66 508 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-204ENST00000429774 DACH1Q9UI36 760 aa8.2□□□□□ -1.1
ATXN3-204ENST00000429774 TMEM131LA2VDJ0 1609 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 CYP27B1O15528 508 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 CREB3L3Q68CJ9 461 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 KIAA0825Q8IV33 1275 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 SMARCC2Q8TAQ2 1214 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 PANK2Q9BZ23 570 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 CGNQ9P2M7 1197 aaKnown RBP8.19□□□□□ -1.1
ATXN3-204ENST00000429774 ATP2B4P23634 1241 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 MFSD14BQ5SR56 506 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 DBNDD1Q9H9R9 158 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 HELLSQ9NRZ9 838 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 MAST3O60307 1309 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 ZNF532Q9HCE3 1301 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 TFIP11Q9UBB9 837 aaKnown RBP8.19□□□□□ -1.1
ATXN3-204ENST00000429774 PTCH1Q13635 1447 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 SPDYE4A6NLX3 237 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 B4E1Z4 1266 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 PDIA4P13667 645 aaKnown RBP8.19□□□□□ -1.1
ATXN3-204ENST00000429774 FAM227BQ96M60 508 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
ATXN3-204ENST00000429774 CA8P35219 290 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 ALG1Q9BT22 464 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.19□□□□□ -1.1
ATXN3-204ENST00000429774 ZBTB21Q9ULJ3 1066 aa8.19□□□□□ -1.1
ATXN3-204ENST00000429774 HLFQ16534 295 aa8.18□□□□□ -1.1
ATXN3-204ENST00000429774 TTC6Q86TZ1 520 aa8.18□□□□□ -1.1
ATXN3-204ENST00000429774 CNKSR1Q969H4 720 aa8.18□□□□□ -1.1
ATXN3-204ENST00000429774 SPATA31A6Q5VVP1 1343 aa8.18□□□□□ -1.1
ATXN3-204ENST00000429774 PCCAP05165 728 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-204ENST00000429774 HMGN5P82970 282 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms