RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 ATRNO75882 1429 aa19.17■□□□□ 0.66
MBD4-203ENST00000429544 CCDC183Q5T5S1 534 aa19.17■□□□□ 0.66
MBD4-203ENST00000429544 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
MBD4-203ENST00000429544 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
MBD4-203ENST00000429544 KRT85P78386 507 aa19.16■□□□□ 0.66
MBD4-203ENST00000429544 VPS72Q15906 364 aa19.16■□□□□ 0.66
MBD4-203ENST00000429544 TSPY26PQ9H489 355 aa19.16■□□□□ 0.66
MBD4-203ENST00000429544 CCT2P78371 535 aaKnown RBP19.16■□□□□ 0.66
MBD4-203ENST00000429544 WWC3Q9ULE0 1092 aa19.16■□□□□ 0.66
MBD4-203ENST00000429544 CASZ1Q86V15 1759 aa19.16■□□□□ 0.66
MBD4-203ENST00000429544 ZNF532Q9HCE3 1301 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 DOCK2Q92608 1830 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 PDE6AP16499 860 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 IGHMBP2P38935 993 aaKnown RBP19.15■□□□□ 0.66
MBD4-203ENST00000429544 FAM184AQ8NB25 1140 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 NSUN7Q8NE18 718 aaKnown RBP19.15■□□□□ 0.66
MBD4-203ENST00000429544 SMARCC2Q8TAQ2 1214 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 LLPHQ9BRT6 129 aaKnown RBP19.15■□□□□ 0.66
MBD4-203ENST00000429544 COL4A1P02462 1669 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 RTL9Q8NET4 1388 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 TRIM44Q96DX7 344 aaPredicted RBP19.15■□□□□ 0.66
MBD4-203ENST00000429544 PPP1R9BQ96SB3 815 aa19.15■□□□□ 0.66
MBD4-203ENST00000429544 NCOA5Q9HCD5 579 aaKnown RBP19.15■□□□□ 0.66
MBD4-203ENST00000429544 UBE3CQ15386 1083 aa19.14■□□□□ 0.66
MBD4-203ENST00000429544 TTC6Q86TZ1 520 aa19.14■□□□□ 0.66
MBD4-203ENST00000429544 GPHNQ9NQX3 736 aaPredicted RBP19.14■□□□□ 0.66
MBD4-203ENST00000429544 H3BQV1 296 aa19.14■□□□□ 0.65
MBD4-203ENST00000429544 CTDNEP1O95476 244 aa19.14■□□□□ 0.65
MBD4-203ENST00000429544 IFFO2Q5TF58 517 aa19.14■□□□□ 0.65
MBD4-203ENST00000429544 PTF1AQ7RTS3 328 aa19.14■□□□□ 0.65
MBD4-203ENST00000429544 SPATA5Q8NB90 893 aa19.14■□□□□ 0.65
MBD4-203ENST00000429544 PTPDC1A2A3K4 754 aa19.13■□□□□ 0.65
MBD4-203ENST00000429544 ZNF213O14771 459 aa19.13■□□□□ 0.65
MBD4-203ENST00000429544 PDIA3P30101 505 aaKnown RBP19.13■□□□□ 0.65
MBD4-203ENST00000429544 FOSBP53539 338 aa19.13■□□□□ 0.65
MBD4-203ENST00000429544 RASGRF1Q13972 1273 aa19.13■□□□□ 0.65
MBD4-203ENST00000429544 RNF214Q8ND24 703 aa19.13■□□□□ 0.65
MBD4-203ENST00000429544 MB21D2Q8IYB1 491 aaPredicted RBP19.13■□□□□ 0.65
MBD4-203ENST00000429544 ZNF274Q96GC6 653 aaPredicted RBP19.13■□□□□ 0.65
MBD4-203ENST00000429544 MYH15Q9Y2K3 1946 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 SCN7AQ01118 1682 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 TAF1P21675 1872 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 TCRBV5S4A2TA0A5A2 114 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 PRC1O43663 620 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 RESTQ13127 1097 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 SMIM5Q71RC9 77 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 BTAF1O14981 1849 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 ERFEQ4G0M1 354 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
MBD4-203ENST00000429544 TFIP11Q9UBB9 837 aaKnown RBP19.12■□□□□ 0.65
MBD4-203ENST00000429544 A0A1B0GUL6 1792 aa19.11■□□□□ 0.65
MBD4-203ENST00000429544 APPP05067 770 aa19.11■□□□□ 0.65
MBD4-203ENST00000429544 MCM5P33992 734 aa19.11■□□□□ 0.65
MBD4-203ENST00000429544 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
MBD4-203ENST00000429544 CHRNDQ07001 517 aa19.11■□□□□ 0.65
MBD4-203ENST00000429544 RALYLQ86SE5 291 aaKnown RBP19.11■□□□□ 0.65
MBD4-203ENST00000429544 NCOA7Q8NI08 942 aa19.11■□□□□ 0.65
MBD4-203ENST00000429544 NBPF3Q9H094 633 aa19.11■□□□□ 0.65
MBD4-203ENST00000429544 ELP1O95163 1332 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 PPFIA3O75145 1194 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 BCAMP50895 628 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 ANTXR2P58335 489 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 BICDL1Q6ZP65 573 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 C3orf67Q6ZVT6 689 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 FBXL16Q8N461 479 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 CNTNAP4Q9C0A0 1308 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 MAGEB6Q8N7X4 407 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 AIDAQ96BJ3 306 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 SPATA32Q96LK8 384 aa19.1■□□□□ 0.65
MBD4-203ENST00000429544 CDC5LQ99459 802 aaKnown RBP19.1■□□□□ 0.65
MBD4-203ENST00000429544 SCAND2PQ9GZW5 306 aaPredicted RBP19.1■□□□□ 0.65
MBD4-203ENST00000429544 SALL1Q9NSC2 1324 aa19.09■□□□□ 0.65
MBD4-203ENST00000429544 LETM1O95202 739 aaPredicted RBP19.09■□□□□ 0.65
MBD4-203ENST00000429544 MAP3K12Q12852 859 aa19.09■□□□□ 0.65
MBD4-203ENST00000429544 TBC1D10CQ8IV04 446 aa19.09■□□□□ 0.65
MBD4-203ENST00000429544 KIF3AQ9Y496 699 aa19.09■□□□□ 0.65
MBD4-203ENST00000429544 LEO1Q8WVC0 666 aaPredicted RBP19.09■□□□□ 0.65
MBD4-203ENST00000429544 KLF18A0A0U1RQI7 1052 aa19.08■□□□□ 0.65
MBD4-203ENST00000429544 EVCP57679 992 aa19.08■□□□□ 0.65
MBD4-203ENST00000429544 STRBPQ96SI9 672 aaKnown RBP19.08■□□□□ 0.65
MBD4-203ENST00000429544 CHD4Q14839 1912 aa19.08■□□□□ 0.64
MBD4-203ENST00000429544 NAA16Q6N069 864 aaPredicted RBP19.08■□□□□ 0.64
MBD4-203ENST00000429544 FNBP4Q8N3X1 1017 aaPredicted RBP19.08■□□□□ 0.64
MBD4-203ENST00000429544 ZSCAN16Q9H4T2 348 aaPredicted RBP19.08■□□□□ 0.64
MBD4-203ENST00000429544 DENND2AQ9ULE3 1009 aa19.08■□□□□ 0.64
MBD4-203ENST00000429544 NHSQ6T4R5 1651 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 GOLGA8BA8MQT2 603 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 MBD4O95243 580 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 TBC1D9BQ66K14 1250 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 ANKRD18AQ8IVF6 992 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 USP21Q9UK80 565 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 THSD7AQ9UPZ6 1657 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 ESPNB1AK53 854 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 TRDNQ13061 729 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 FAM182BQ5T319 152 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 GIMAP6Q6P9H5 292 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 RAB11FIP4Q86YS3 637 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
MBD4-203ENST00000429544 LIG1P18858 919 aa19.06■□□□□ 0.64
MBD4-203ENST00000429544 CHMP4CQ96CF2 233 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms