RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 RPS12P25398 132 aaKnown RBP27.44■■□□□ 1.98
PTPN18-205ENST00000428843 GNL3LQ9NVN8 582 aaKnown RBP27.44■■□□□ 1.98
PTPN18-205ENST00000428843 TLR7Q9NYK1 1049 aaKnown RBP27.44■■□□□ 1.98
PTPN18-205ENST00000428843 GPRC5DQ9NZD1 345 aa27.44■■□□□ 1.98
PTPN18-205ENST00000428843 DBNLQ9UJU6 430 aaKnown RBP27.44■■□□□ 1.98
PTPN18-205ENST00000428843 SMARCA5O60264 1052 aaPredicted RBP27.43■■□□□ 1.98
PTPN18-205ENST00000428843 LMOD1P29536 600 aaPredicted RBP27.43■■□□□ 1.98
PTPN18-205ENST00000428843 CHAF1AQ13111 956 aaPredicted RBP27.43■■□□□ 1.98
PTPN18-205ENST00000428843 AGBL3Q8NEM8 1001 aa27.43■■□□□ 1.98
PTPN18-205ENST00000428843 DPF2Q92785 391 aa27.43■■□□□ 1.98
PTPN18-205ENST00000428843 GMLQ99445 158 aa27.43■■□□□ 1.98
PTPN18-205ENST00000428843 BCL11AQ9H165 835 aa27.43■■□□□ 1.98
PTPN18-205ENST00000428843 HACL1Q9UJ83 578 aa27.43■■□□□ 1.98
PTPN18-205ENST00000428843 IQCA1LA6NCM1 817 aa27.42■■□□□ 1.98
PTPN18-205ENST00000428843 IGHDP01880 384 aa27.42■■□□□ 1.98
PTPN18-205ENST00000428843 EPS15P42566 896 aa27.42■■□□□ 1.98
PTPN18-205ENST00000428843 COL1A1P02452 1464 aaPredicted RBP27.42■■□□□ 1.98
PTPN18-205ENST00000428843 CERS5Q8N5B7 392 aa27.41■■□□□ 1.98
PTPN18-205ENST00000428843 GCC1Q96CN9 775 aa27.41■■□□□ 1.98
PTPN18-205ENST00000428843 CNOT7Q9UIV1 285 aaKnown RBP27.41■■□□□ 1.98
PTPN18-205ENST00000428843 MYO3BQ8WXR4 1341 aa27.41■■□□□ 1.98
PTPN18-205ENST00000428843 SHTN1A0MZ66 631 aa27.4■■□□□ 1.98
PTPN18-205ENST00000428843 KIF3CO14782 793 aa27.4■■□□□ 1.98
PTPN18-205ENST00000428843 SEMA3EO15041 775 aa27.4■■□□□ 1.98
PTPN18-205ENST00000428843 ZBTB22O15209 634 aa27.4■■□□□ 1.98
PTPN18-205ENST00000428843 FKBP1AP62942 108 aaKnown RBP27.4■■□□□ 1.98
PTPN18-205ENST00000428843 MICALL2Q8IY33 904 aa27.4■■□□□ 1.98
PTPN18-205ENST00000428843 TAF1DQ9H5J8 278 aaPredicted RBP27.4■■□□□ 1.98
PTPN18-205ENST00000428843 DENND2AQ9ULE3 1009 aa27.4■■□□□ 1.98
PTPN18-205ENST00000428843 IFIT2P09913 472 aaKnown RBP27.39■■□□□ 1.98
PTPN18-205ENST00000428843 ARID4AP29374 1257 aaPredicted RBP27.39■■□□□ 1.98
PTPN18-205ENST00000428843 EPHX2P34913 555 aa27.39■■□□□ 1.98
PTPN18-205ENST00000428843 RASGRF1Q13972 1273 aa27.39■■□□□ 1.98
PTPN18-205ENST00000428843 CCDC158Q5M9N0 1113 aa27.39■■□□□ 1.98
PTPN18-205ENST00000428843 NEFLP07196 543 aa27.38■■□□□ 1.97
PTPN18-205ENST00000428843 UQCRFS1P1P0C7P4 283 aa27.38■■□□□ 1.97
PTPN18-205ENST00000428843 MFSD14BQ5SR56 506 aa27.38■■□□□ 1.97
PTPN18-205ENST00000428843 TTC39AQ5SRH9 613 aa27.38■■□□□ 1.97
PTPN18-205ENST00000428843 H7C1D1 291 aa27.37■■□□□ 1.97
PTPN18-205ENST00000428843 TBC1D22AQ8WUA7 517 aa27.37■■□□□ 1.97
PTPN18-205ENST00000428843 USP17L8P0C7I0 530 aa27.36■■□□□ 1.97
PTPN18-205ENST00000428843 SCARF1Q14162 830 aa27.36■■□□□ 1.97
PTPN18-205ENST00000428843 KIAA0825Q8IV33 1275 aa27.36■■□□□ 1.97
PTPN18-205ENST00000428843 WDR66Q8TBY9 1149 aa27.36■■□□□ 1.97
PTPN18-205ENST00000428843 AKAP11Q9UKA4 1901 aa27.35■■□□□ 1.97
PTPN18-205ENST00000428843 MCAMP43121 646 aa27.35■■□□□ 1.97
PTPN18-205ENST00000428843 ANKRD45Q5TZF3 282 aa27.35■■□□□ 1.97
PTPN18-205ENST00000428843 SMC5Q8IY18 1101 aa27.35■■□□□ 1.97
PTPN18-205ENST00000428843 ZNF512BQ96KM6 892 aaPredicted RBP27.35■■□□□ 1.97
PTPN18-205ENST00000428843 ADARB2Q9NS39 739 aaKnown RBP27.35■■□□□ 1.97
PTPN18-205ENST00000428843 HMG20BQ9P0W2 317 aa27.35■■□□□ 1.97
PTPN18-205ENST00000428843 PDS5AQ29RF7 1337 aaKnown RBP27.35■■□□□ 1.97
PTPN18-205ENST00000428843 ZNF280AP59817 542 aaPredicted RBP27.34■■□□□ 1.97
PTPN18-205ENST00000428843 F8W031 263 aaPredicted RBP27.33■■□□□ 1.97
PTPN18-205ENST00000428843 GRIK5Q16478 980 aa27.33■■□□□ 1.97
PTPN18-205ENST00000428843 PI16Q6UXB8 463 aa27.33■■□□□ 1.97
PTPN18-205ENST00000428843 SAMD7Q7Z3H4 446 aa27.33■■□□□ 1.97
PTPN18-205ENST00000428843 SPATA5Q8NB90 893 aa27.33■■□□□ 1.97
PTPN18-205ENST00000428843 EAPPQ56P03 285 aaPredicted RBP27.32■■□□□ 1.96
PTPN18-205ENST00000428843 PNMA8AQ86V59 439 aaPredicted RBP27.32■■□□□ 1.96
PTPN18-205ENST00000428843 C16orf71Q8IYS4 520 aaPredicted RBP27.32■■□□□ 1.96
PTPN18-205ENST00000428843 OGFOD1Q8N543 542 aa27.32■■□□□ 1.96
PTPN18-205ENST00000428843 TRPM4Q8TD43 1214 aa27.32■■□□□ 1.96
PTPN18-205ENST00000428843 SALL1Q9NSC2 1324 aa27.32■■□□□ 1.96
PTPN18-205ENST00000428843 EGFRP00533 1210 aa27.31■■□□□ 1.96
PTPN18-205ENST00000428843 TBC1D10BQ4KMP7 808 aaPredicted RBP27.31■■□□□ 1.96
PTPN18-205ENST00000428843 USP50Q70EL3 339 aaPredicted RBP27.31■■□□□ 1.96
PTPN18-205ENST00000428843 SNRKQ9NRH2 765 aa27.31■■□□□ 1.96
PTPN18-205ENST00000428843 ZBTB47Q9UFB7 747 aaPredicted RBP27.31■■□□□ 1.96
PTPN18-205ENST00000428843 HDAC9Q9UKV0 1011 aa27.31■■□□□ 1.96
PTPN18-205ENST00000428843 POTEIP0CG38 1075 aa27.3■■□□□ 1.96
PTPN18-205ENST00000428843 POTEJP0CG39 1038 aa27.3■■□□□ 1.96
PTPN18-205ENST00000428843 RBM26Q5T8P6 1007 aaKnown RBP27.3■■□□□ 1.96
PTPN18-205ENST00000428843 MYOZ2Q9NPC6 264 aa27.3■■□□□ 1.96
PTPN18-205ENST00000428843 TTF2Q9UNY4 1162 aaKnown RBP27.3■■□□□ 1.96
PTPN18-205ENST00000428843 ADAMTSL1Q8N6G6 1762 aa27.3■■□□□ 1.96
PTPN18-205ENST00000428843 MMP14P50281 582 aa27.29■■□□□ 1.96
PTPN18-205ENST00000428843 HIRAP54198 1017 aaPredicted RBP27.29■■□□□ 1.96
PTPN18-205ENST00000428843 KIF4BQ2VIQ3 1234 aa27.29■■□□□ 1.96
PTPN18-205ENST00000428843 B4GALNT3Q6L9W6 998 aa27.29■■□□□ 1.96
PTPN18-205ENST00000428843 SUGT1Q9Y2Z0 365 aa27.29■■□□□ 1.96
PTPN18-205ENST00000428843 PRDX5P30044 214 aa27.28■■□□□ 1.96
PTPN18-205ENST00000428843 ZAP70P43403 619 aa27.28■■□□□ 1.96
PTPN18-205ENST00000428843 ZGPATQ8N5A5 531 aaKnown RBP27.28■■□□□ 1.96
PTPN18-205ENST00000428843 ABCF2Q9UG63 623 aa27.27■■□□□ 1.96
PTPN18-205ENST00000428843 TOMM70O94826 608 aa27.26■■□□□ 1.95
PTPN18-205ENST00000428843 LDHBP07195 334 aaKnown RBP27.26■■□□□ 1.95
PTPN18-205ENST00000428843 TBC1D9Q6ZT07 1266 aa27.26■■□□□ 1.95
PTPN18-205ENST00000428843 LDHDQ86WU2 507 aa27.26■■□□□ 1.95
PTPN18-205ENST00000428843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.26■■□□□ 1.95
PTPN18-205ENST00000428843 CYP2E1P05181 493 aaPredicted RBP27.25■■□□□ 1.95
PTPN18-205ENST00000428843 ATP5JP18859 108 aa27.25■■□□□ 1.95
PTPN18-205ENST00000428843 NUCB1Q02818 461 aa27.25■■□□□ 1.95
PTPN18-205ENST00000428843 OTUD7AQ8TE49 926 aaPredicted RBP27.25■■□□□ 1.95
PTPN18-205ENST00000428843 LNPKQ9C0E8 428 aa27.25■■□□□ 1.95
PTPN18-205ENST00000428843 CLEC11AQ9Y240 323 aa27.25■■□□□ 1.95
PTPN18-205ENST00000428843 NDUFB9Q9Y6M9 179 aa27.25■■□□□ 1.95
PTPN18-205ENST00000428843 MAST3O60307 1309 aa27.24■■□□□ 1.95
PTPN18-205ENST00000428843 MYO5AQ9Y4I1 1855 aaKnown RBP27.24■■□□□ 1.95
PTPN18-205ENST00000428843 CFAP100Q494V2 611 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms