RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
NR1I3-209ENST00000428574 KIF2CQ99661 725 aa10.9□□□□□ -0.66
NR1I3-209ENST00000428574 TM6SF1Q9BZW5 370 aa10.9□□□□□ -0.66
NR1I3-209ENST00000428574 MTFR1LQ9H019 292 aa10.9□□□□□ -0.66
NR1I3-209ENST00000428574 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-209ENST00000428574 BCAMP50895 628 aa10.89□□□□□ -0.67
NR1I3-209ENST00000428574 SPTY2D1Q68D10 685 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-209ENST00000428574 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
NR1I3-209ENST00000428574 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
NR1I3-209ENST00000428574 UPF1Q92900 1129 aaKnown RBP eCLIP10.89□□□□□ -0.67
NR1I3-209ENST00000428574 EDC3Q96F86 508 aaKnown RBP10.89□□□□□ -0.67
NR1I3-209ENST00000428574 FAM227BQ96M60 508 aa10.89□□□□□ -0.67
NR1I3-209ENST00000428574 MAST3O60307 1309 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 MAST2Q6P0Q8 1798 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 ST18O60284 1047 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 IL1R1P14778 569 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 GNAT2P19087 354 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 TGFB2P61812 414 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 GPSM2P81274 684 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 KRT32Q14532 448 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 NECTIN1Q15223 517 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 WASHC4Q2M389 1173 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 SOGA3Q5TF21 947 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 C2CD5Q86YS7 1000 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 TDRD7Q8NHU6 1098 aaKnown RBP10.88□□□□□ -0.67
NR1I3-209ENST00000428574 WDR66Q8TBY9 1149 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 EYA3Q99504 573 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 RTFDC1Q9BY42 306 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-209ENST00000428574 IL25Q9H293 177 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 ANTXR1Q9H6X2 564 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-209ENST00000428574 CTNNA3Q9UI47 895 aa10.88□□□□□ -0.67
NR1I3-209ENST00000428574 SNED1Q8TER0 1413 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 TCRBV5S4A2TA0A5A2 114 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 UFL1O94874 794 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 PDE6AP16499 860 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 POLD1P28340 1107 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 GYG1P46976 350 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 SLC9C2Q5TAH2 1124 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 SUPT20HQ8NEM7 779 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 TBC1D16Q8TBP0 767 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 TBC1D22AQ8WUA7 517 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 COA1Q9GZY4 146 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 VPS33BQ9H267 617 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 PIH1D3Q9NQM4 214 aaKnown RBP10.87□□□□□ -0.67
NR1I3-209ENST00000428574 SUGT1Q9Y2Z0 365 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 MYH7P12883 1935 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 TAF1P21675 1872 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 COL1A1P02452 1464 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-209ENST00000428574 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
NR1I3-209ENST00000428574 FAM205AQ6ZU69 1335 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 IDH1O75874 414 aaKnown RBP10.86□□□□□ -0.67
NR1I3-209ENST00000428574 PSMA5P28066 241 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 NT5C2P49902 561 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 ALX1Q15699 326 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 PRPF40BQ6NWY9 871 aaKnown RBP10.86□□□□□ -0.67
NR1I3-209ENST00000428574 PI16Q6UXB8 463 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 ZNF589Q86UQ0 364 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-209ENST00000428574 HSCBQ8IWL3 235 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 MPNDQ8N594 471 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 OSBP2Q969R2 916 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 NSFL1CQ9UNZ2 370 aaKnown RBP10.86□□□□□ -0.67
NR1I3-209ENST00000428574 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
NR1I3-209ENST00000428574 NDUFB9Q9Y6M9 179 aa10.86□□□□□ -0.67
NR1I3-209ENST00000428574 SNAP23O00161 211 aa10.85□□□□□ -0.67
NR1I3-209ENST00000428574 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-209ENST00000428574 HMGB1P09429 215 aaKnown RBP10.85□□□□□ -0.67
NR1I3-209ENST00000428574 PTH1RQ03431 593 aa10.85□□□□□ -0.67
NR1I3-209ENST00000428574 DPP8Q6V1X1 898 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-209ENST00000428574 C7orf43Q8WVR3 580 aa10.85□□□□□ -0.67
NR1I3-209ENST00000428574 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-209ENST00000428574 LRP2BPQ9P2M1 347 aa10.85□□□□□ -0.67
NR1I3-209ENST00000428574 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 GPAA1O43292 621 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 HSPD1P10809 573 aaKnown RBP10.84□□□□□ -0.67
NR1I3-209ENST00000428574 FKBP1AP62942 108 aaKnown RBP10.84□□□□□ -0.67
NR1I3-209ENST00000428574 GSTO1P78417 241 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 GIMAP6Q6P9H5 292 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 SLF2Q8IX21 1173 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 RTKN2Q8IZC4 609 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 TTLL6Q8N841 843 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 ZNF622Q969S3 477 aaKnown RBP eCLIP10.84□□□□□ -0.67
NR1I3-209ENST00000428574 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 CD209Q9NNX6 404 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 POLLQ9UGP5 575 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 CD2APQ9Y5K6 639 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 SNX14Q9Y5W7 946 aa10.84□□□□□ -0.67
NR1I3-209ENST00000428574 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
NR1I3-209ENST00000428574 SLC27A2O14975 620 aa10.83□□□□□ -0.68
NR1I3-209ENST00000428574 PODNQ7Z5L7 613 aa10.83□□□□□ -0.68
NR1I3-209ENST00000428574 PSMD1Q99460 953 aa10.83□□□□□ -0.68
NR1I3-209ENST00000428574 SGIP1Q9BQI5 828 aa10.83□□□□□ -0.68
NR1I3-209ENST00000428574 ZC3H12CQ9C0D7 883 aaKnown RBP10.83□□□□□ -0.68
NR1I3-209ENST00000428574 WWC3Q9ULE0 1092 aa10.83□□□□□ -0.68
NR1I3-209ENST00000428574 MYH13Q9UKX3 1938 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms