RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
SCAP-206ENST00000428413 ST3GAL1Q11201 340 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 HLFQ16534 295 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 CLIC6Q96NY7 704 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 AKAP2Q9Y2D5 859 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 SLC12A7Q9Y666 1083 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
SCAP-206ENST00000428413 PTPN14Q15678 1187 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 TMEM94Q12767 1356 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 U2AF2P26368 475 aaKnown RBP eCLIP17.48■□□□□ 0.395e-6■□□□□ 11
SCAP-206ENST00000428413 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
SCAP-206ENST00000428413 TERF1P54274 439 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
SCAP-206ENST00000428413 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 UBAC1Q9BSL1 405 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
SCAP-206ENST00000428413 ANO10Q9NW15 660 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 UBE2Q2LH0YL09 131 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 UVSSAQ2YD98 709 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 TM6SF1Q9BZW5 370 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 MAST3O60307 1309 aa17.47■□□□□ 0.39
SCAP-206ENST00000428413 EXOC5O00471 708 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 SPTLC2O15270 562 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 PHKA1P46020 1223 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
SCAP-206ENST00000428413 HAUS7Q99871 368 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 MBD4O95243 580 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 CNNM3Q8NE01 707 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 UIMC1Q96RL1 719 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 PDIA3P30101 505 aaKnown RBP17.46■□□□□ 0.39
SCAP-206ENST00000428413 CLEC17AQ6ZS10 378 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 MRPS27Q92552 414 aaKnown RBP17.46■□□□□ 0.39
SCAP-206ENST00000428413 EEF2KMTQ96G04 330 aa17.46■□□□□ 0.39
SCAP-206ENST00000428413 HMGB1P09429 215 aaKnown RBP17.45■□□□□ 0.38
SCAP-206ENST00000428413 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
SCAP-206ENST00000428413 ERICH4A6NGS2 130 aa17.45■□□□□ 0.38
SCAP-206ENST00000428413 TRERF1Q96PN7 1200 aa17.45■□□□□ 0.38
SCAP-206ENST00000428413 PLIN2Q99541 437 aa17.45■□□□□ 0.38
SCAP-206ENST00000428413 PRKAB2O43741 272 aa17.45■□□□□ 0.38
SCAP-206ENST00000428413 STX1AQ16623 288 aa17.45■□□□□ 0.38
SCAP-206ENST00000428413 NSUN7Q8NE18 718 aaKnown RBP17.45■□□□□ 0.38
SCAP-206ENST00000428413 SLC4A4Q9Y6R1 1079 aa17.45■□□□□ 0.38
SCAP-206ENST00000428413 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCAP-206ENST00000428413 NDUFA8P51970 172 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 PDLIM2Q96JY6 352 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 ZSCAN16Q9H4T2 348 aaPredicted RBP17.44■□□□□ 0.38
SCAP-206ENST00000428413 ZBTB1Q9Y2K1 713 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 NRKQ7Z2Y5 1582 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 ZNF532Q9HCE3 1301 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 ZBTB43O43298 467 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 SYKP43405 635 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 CLSTN2Q9H4D0 955 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 CACTINQ8WUQ7 758 aaKnown RBP17.44■□□□□ 0.38
SCAP-206ENST00000428413 SDR42E1Q8WUS8 393 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 PCDHA7Q9UN72 937 aa17.44■□□□□ 0.38
SCAP-206ENST00000428413 NIP7Q9Y221 180 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCAP-206ENST00000428413 URI1O94763 535 aaPredicted RBP17.43■□□□□ 0.38
SCAP-206ENST00000428413 TRMT44Q8IYL2 757 aaKnown RBP17.43■□□□□ 0.38
SCAP-206ENST00000428413 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
SCAP-206ENST00000428413 ZNF500O60304 480 aaPredicted RBP17.43■□□□□ 0.38
SCAP-206ENST00000428413 ZNF75DP51815 510 aa17.43■□□□□ 0.38
SCAP-206ENST00000428413 SART3Q15020 963 aaKnown RBP17.43■□□□□ 0.38
SCAP-206ENST00000428413 MNS1Q8NEH6 495 aa17.43■□□□□ 0.38
SCAP-206ENST00000428413 PCMTD1Q96MG8 357 aaPredicted RBP17.43■□□□□ 0.38
SCAP-206ENST00000428413 MAPK8IP1Q9UQF2 711 aa17.43■□□□□ 0.38
SCAP-206ENST00000428413 BCAMP50895 628 aa17.43■□□□□ 0.38
SCAP-206ENST00000428413 TAF3Q5VWG9 929 aa17.43■□□□□ 0.38
SCAP-206ENST00000428413 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 ERCC3P19447 782 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 CYP7A1P22680 504 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 IGHMBP2P38935 993 aaKnown RBP17.42■□□□□ 0.38
SCAP-206ENST00000428413 MAP3K12Q12852 859 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 PXDNQ92626 1479 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 MTX1Q13505 466 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 CEP135Q66GS9 1140 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 WWC3Q9ULE0 1092 aa17.42■□□□□ 0.38
SCAP-206ENST00000428413 DIP2BQ9P265 1576 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 SRCAPQ6ZRS2 3230 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 MFSD6Q6ZSS7 791 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 GOLPH3LQ9H4A5 285 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 ZBTB22O15209 634 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 ZSCAN20P17040 1043 aaPredicted RBP17.41■□□□□ 0.38
SCAP-206ENST00000428413 DPCR1Q3MIW9 517 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 CCDC191Q8NCU4 936 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 VAT1LQ9HCJ6 419 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
SCAP-206ENST00000428413 PNOCQ13519 176 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 NACAP1Q9BZK3 213 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 SENP2Q9HC62 589 aa17.41■□□□□ 0.38
SCAP-206ENST00000428413 CYP2D7A0A087X1C5 515 aa17.4■□□□□ 0.38
SCAP-206ENST00000428413 TCIRG1Q13488 830 aa17.4■□□□□ 0.38
SCAP-206ENST00000428413 CCDC144BQ3MJ40 725 aa17.4■□□□□ 0.38
SCAP-206ENST00000428413 GRAMD1CQ8IYS0 662 aa17.4■□□□□ 0.38
SCAP-206ENST00000428413 TNNT3P45378 269 aaPredicted RBP17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms