RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ZNF277Q9NRM2 450 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-204ENST00000427724 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
TCOF1-204ENST00000427724 TET3O43151 1660 aa12.35□□□□□ -0.43
TCOF1-204ENST00000427724 CD2BP2O95400 341 aaKnown RBP12.35□□□□□ -0.43
TCOF1-204ENST00000427724 TANGO6Q9C0B7 1094 aa12.35□□□□□ -0.43
TCOF1-204ENST00000427724 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 BARGINQ6ZT62 677 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 LETM1O95202 739 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-204ENST00000427724 PCCAP05165 728 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-204ENST00000427724 KIF22Q14807 665 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 ANKRD1Q15327 319 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 ESYT1Q9BSJ8 1104 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 GSPT1P15170 499 aaKnown RBP12.34□□□□□ -0.43
TCOF1-204ENST00000427724 NFIXQ14938 502 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 POTEAQ6S8J7 498 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 CPXCR1Q8N123 301 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
TCOF1-204ENST00000427724 ERICH4A6NGS2 130 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 GAS2L3Q86XJ1 694 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 PAF1Q8N7H5 531 aa12.34□□□□□ -0.43
TCOF1-204ENST00000427724 ABCA6Q8N139 1617 aa12.33□□□□□ -0.43
TCOF1-204ENST00000427724 HEG1Q9ULI3 1381 aa12.33□□□□□ -0.43
TCOF1-204ENST00000427724 CA8P35219 290 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 CHRNDQ07001 517 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 STK38Q15208 465 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 HLFQ16534 295 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 GPR101Q96P66 508 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-204ENST00000427724 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 UNC13BO14795 1591 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 CCDC66A2RUB6 948 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 MBD4O95243 580 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 OTUD7BQ6GQQ9 843 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 ESR2Q92731 530 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 ZNF830Q96NB3 372 aaPredicted RBP12.33□□□□□ -0.44
TCOF1-204ENST00000427724 NOL7Q9UMY1 257 aaKnown RBP12.33□□□□□ -0.44
TCOF1-204ENST00000427724 ZNF804BA4D1E1 1349 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 LIG1P18858 919 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 KRT85P78386 507 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 TBC1D9BQ66K14 1250 aa12.33□□□□□ -0.44
TCOF1-204ENST00000427724 HOOK1Q9UJC3 728 aaKnown RBP12.33□□□□□ -0.44
TCOF1-204ENST00000427724 GOLGA8AA7E2F4 631 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 GOLGA8BA8MQT2 603 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 CCDC192P0DO97 292 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 KIF5BP33176 963 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-204ENST00000427724 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 CLTCL1P53675 1640 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 RNF17Q9BXT8 1623 aaKnown RBP12.32□□□□□ -0.44
TCOF1-204ENST00000427724 XDHP47989 1333 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 BCAMP50895 628 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 DHX8Q14562 1220 aaKnown RBP12.32□□□□□ -0.44
TCOF1-204ENST00000427724 CAMK4Q16566 473 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 LRSAM1Q6UWE0 723 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 PNPLA6Q8IY17 1366 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
TCOF1-204ENST00000427724 SP4Q02446 784 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 NLRP10Q86W26 655 aa12.32□□□□□ -0.44
TCOF1-204ENST00000427724 PRDM1O75626 825 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 NLRP5P59047 1200 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 PLXNC1O60486 1568 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 TECPR2O15040 1411 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 PKP1Q13835 747 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 CLEC4GQ6UXB4 293 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 TGFBRAP1Q8WUH2 860 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 CHAMP1Q96JM3 812 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 TCEANC2Q96MN5 208 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 TRERF1Q96PN7 1200 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 LIMCH1Q9UPQ0 1083 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 GADL1Q6ZQY3 521 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 ZKSCAN5Q9Y2L8 839 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 MROH5Q6ZUA9 1318 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 SH2D4AQ9H788 454 aa12.31□□□□□ -0.44
TCOF1-204ENST00000427724 CCDC194A0A1B0GVG4 234 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 TSR1Q2NL82 804 aaKnown RBP12.3□□□□□ -0.44
TCOF1-204ENST00000427724 RBSNQ9H1K0 784 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 EHMT1Q9H9B1 1298 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 DTNBO60941 627 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 CCDC183Q5T5S1 534 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 IFIT1BQ5T764 474 aaKnown RBP12.3□□□□□ -0.44
TCOF1-204ENST00000427724 MTFR1LQ9H019 292 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
TCOF1-204ENST00000427724 SSH2Q76I76 1423 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 ABCC4O15439 1325 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 CNGA1P29973 690 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 WTAPQ15007 396 aa12.3□□□□□ -0.44
TCOF1-204ENST00000427724 FSD2A1L4K1 749 aa12.29□□□□□ -0.44
TCOF1-204ENST00000427724 B4DLN1 442 aa12.29□□□□□ -0.44
TCOF1-204ENST00000427724 ERVV-1B6SEH8 477 aa12.29□□□□□ -0.44
TCOF1-204ENST00000427724 STX6O43752 255 aa12.29□□□□□ -0.44
TCOF1-204ENST00000427724 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
TCOF1-204ENST00000427724 SUPT20HL1Q3ZLR7 823 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms