RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 U2AF2P26368 475 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■■■□□ 15.1
HDLBP-214ENST00000427183 PRPHP41219 470 aa14.19□□□□□ -0.14
HDLBP-214ENST00000427183 PPP1R21Q6ZMI0 780 aa14.19□□□□□ -0.14
HDLBP-214ENST00000427183 ECHDC1Q9NTX5 307 aa14.19□□□□□ -0.14
HDLBP-214ENST00000427183 FANCAO15360 1455 aa14.19□□□□□ -0.14
HDLBP-214ENST00000427183 SATB1Q01826 763 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 VTI1AQ96AJ9 217 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 PREX2Q70Z35 1606 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 WTAPQ15007 396 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 SLF2Q8IX21 1173 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 MAST1Q9Y2H9 1570 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 FAM13AO94988 1023 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 CALM1P0DP23 149 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 CALM2P0DP24 149 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 CALM3P0DP25 149 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 ERMNQ8TAM6 284 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 ZSCAN16Q9H4T2 348 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-214ENST00000427183 NBPF7P0C2Y1 421 aaPredicted RBP14.18□□□□□ -0.14
HDLBP-214ENST00000427183 PLIN2Q99541 437 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 RNASE9P60153 205 aaKnown RBP14.18□□□□□ -0.14
HDLBP-214ENST00000427183 LMBR1Q8WVP7 490 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 MAP3K2Q9Y2U5 619 aa14.18□□□□□ -0.14
HDLBP-214ENST00000427183 PSMA7O14818 248 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 KRT83P78385 493 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 NEDD9Q14511 834 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 LDHAL6AQ6ZMR3 332 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 ATP11AP98196 1134 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 DNM1Q05193 864 aaKnown RBP14.17□□□□□ -0.14
HDLBP-214ENST00000427183 CCDC170Q8IYT3 715 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 FAM184BQ9ULE4 1060 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 A2MP01023 1474 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 CRCPO75575 148 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 XRCC6P12956 609 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDLBP-214ENST00000427183 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
HDLBP-214ENST00000427183 FAM200AQ8TCP9 573 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.17□□□□□ -0.14
HDLBP-214ENST00000427183 SBNO2Q9Y2G9 1366 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 CCDC110Q8TBZ0 833 aa14.17□□□□□ -0.14
HDLBP-214ENST00000427183 CCDC94Q9BW85 323 aaPredicted RBP14.17□□□□□ -0.14
HDLBP-214ENST00000427183 NSD3Q9BZ95 1437 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 TSPY3P0CV98 308 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 TSPY8P0CW00 308 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 VAV2P52735 878 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 IMPG2Q9BZV3 1241 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 ZBTB21Q9ULJ3 1066 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 CLNS1AP54105 237 aaKnown RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 ATP2B3Q16720 1220 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 GKAP1Q5VSY0 366 aaPredicted RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 MTRF1LQ9UGC7 380 aaKnown RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 IQSEC3Q9UPP2 1182 aaPredicted RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.143e-6■■■■■ 29.2
HDLBP-214ENST00000427183 ZBTB43O43298 467 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 CAVIN2O95810 425 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 MCM7P33993 719 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 NEK11Q8NG66 645 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 CCT6BQ92526 530 aa14.16□□□□□ -0.14
HDLBP-214ENST00000427183 GTPBP4Q9BZE4 634 aaKnown RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 COL17A1Q9UMD9 1497 aaPredicted RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
HDLBP-214ENST00000427183 CASQ2O14958 399 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-214ENST00000427183 BUB1BO60566 1050 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-214ENST00000427183 HLA-DOAP06340 250 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 CLCN1P35523 988 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 USP37Q86T82 979 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 FMNL3Q8IVF7 1028 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 PROCA1Q8NCQ7 364 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-214ENST00000427183 IFNKQ9P0W0 207 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 F8W031 263 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-214ENST00000427183 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
HDLBP-214ENST00000427183 RAPGEF1Q13905 1077 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 BAG3O95817 575 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 ALDH3A1P30838 453 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 KCNG4Q8TDN1 519 aa14.15□□□□□ -0.14
HDLBP-214ENST00000427183 TXNDC9O14530 226 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 ZNF131P52739 623 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 PPP2R5CQ13362 524 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 DIXDC1Q155Q3 683 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 NKIRAS1Q9NYS0 192 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 RTL1A6NKG5 1358 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 TRIM27P14373 513 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 GRM1Q13255 1194 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 ALDH1L2Q3SY69 923 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 ARHGEF2Q92974 986 aaKnown RBP14.14□□□□□ -0.15
HDLBP-214ENST00000427183 SPAG1Q07617 926 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 CALCOCO2Q13137 446 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 Q6ZUG5 572 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 ZKSCAN5Q9Y2L8 839 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 RTN1Q16799 776 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 KIAA1524Q8TCG1 905 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 MAK16Q9BXY0 300 aaKnown RBP14.14□□□□□ -0.15
HDLBP-214ENST00000427183 LUC7L2Q9Y383 392 aaKnown RBP14.14□□□□□ -0.15
HDLBP-214ENST00000427183 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 A0A1B0GUL7 405 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 INF2Q27J81 1249 aa14.14□□□□□ -0.15
HDLBP-214ENST00000427183 SIRT1Q96EB6 747 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms