RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 EGFRP00533 1210 aa15.47■□□□□ 0.07
SMIM12-203ENST00000426886 PHKA1P46020 1223 aa15.47■□□□□ 0.07
SMIM12-203ENST00000426886 CCDC8Q9H0W5 538 aaPredicted RBP15.46■□□□□ 0.07
SMIM12-203ENST00000426886 TRPM4Q8TD43 1214 aa15.46■□□□□ 0.06
SMIM12-203ENST00000426886 CEP350Q5VT06 3117 aa15.46■□□□□ 0.06
SMIM12-203ENST00000426886 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
SMIM12-203ENST00000426886 CCDC102BQ68D86 513 aa15.45■□□□□ 0.06
SMIM12-203ENST00000426886 CERS5Q8N5B7 392 aa15.45■□□□□ 0.06
SMIM12-203ENST00000426886 DPF2Q92785 391 aa15.45■□□□□ 0.06
SMIM12-203ENST00000426886 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
SMIM12-203ENST00000426886 USP17L8P0C7I0 530 aa15.45■□□□□ 0.06
SMIM12-203ENST00000426886 MFSD14BQ5SR56 506 aa15.45■□□□□ 0.06
SMIM12-203ENST00000426886 ADARB2Q9NS39 739 aaKnown RBP15.45■□□□□ 0.06
SMIM12-203ENST00000426886 A0A1B0GUL6 1792 aa15.44■□□□□ 0.06
SMIM12-203ENST00000426886 RPS12P25398 132 aaKnown RBP15.44■□□□□ 0.06
SMIM12-203ENST00000426886 AGBL3Q8NEM8 1001 aa15.44■□□□□ 0.06
SMIM12-203ENST00000426886 RHPN1Q8TCX5 695 aa15.44■□□□□ 0.06
SMIM12-203ENST00000426886 HIRAP54198 1017 aaPredicted RBP15.44■□□□□ 0.06
SMIM12-203ENST00000426886 PNMA8AQ86V59 439 aaPredicted RBP15.44■□□□□ 0.06
SMIM12-203ENST00000426886 OGFOD1Q8N543 542 aa15.44■□□□□ 0.06
SMIM12-203ENST00000426886 EAF2Q96CJ1 260 aaPredicted RBP15.44■□□□□ 0.06
SMIM12-203ENST00000426886 GMLQ99445 158 aa15.44■□□□□ 0.06
SMIM12-203ENST00000426886 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
SMIM12-203ENST00000426886 TLR7Q9NYK1 1049 aaKnown RBP15.44■□□□□ 0.06
SMIM12-203ENST00000426886 WDR90Q96KV7 1748 aa15.43■□□□□ 0.06
SMIM12-203ENST00000426886 HSP90AB4PQ58FF6 505 aa15.43■□□□□ 0.06
SMIM12-203ENST00000426886 MAP1SQ66K74 1059 aaPredicted RBP15.43■□□□□ 0.06
SMIM12-203ENST00000426886 GNL3LQ9NVN8 582 aaKnown RBP15.43■□□□□ 0.06
SMIM12-203ENST00000426886 GRIK5Q16478 980 aa15.43■□□□□ 0.06
SMIM12-203ENST00000426886 AACSQ86V21 672 aa15.43■□□□□ 0.06
SMIM12-203ENST00000426886 SMARCA5O60264 1052 aaPredicted RBP15.42■□□□□ 0.06
SMIM12-203ENST00000426886 C1QTNF8P60827 252 aa15.42■□□□□ 0.06
SMIM12-203ENST00000426886 ERC1Q8IUD2 1116 aa15.42■□□□□ 0.06
SMIM12-203ENST00000426886 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
SMIM12-203ENST00000426886 KIF4BQ2VIQ3 1234 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 PI16Q6UXB8 463 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 USP50Q70EL3 339 aaPredicted RBP15.41■□□□□ 0.06
SMIM12-203ENST00000426886 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 PCDHAC2Q9Y5I4 1007 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 ASTN2O75129 1339 aaPredicted RBP15.41■□□□□ 0.06
SMIM12-203ENST00000426886 RBM5P52756 815 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMIM12-203ENST00000426886 RASGRF1Q13972 1273 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 LDHDQ86WU2 507 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 SMC1BQ8NDV3 1235 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 RBM46Q8TBY0 533 aaKnown RBP15.41■□□□□ 0.06
SMIM12-203ENST00000426886 SNRKQ9NRH2 765 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 DBNLQ9UJU6 430 aaKnown RBP15.41■□□□□ 0.06
SMIM12-203ENST00000426886 FAM205AQ6ZU69 1335 aa15.41■□□□□ 0.06
SMIM12-203ENST00000426886 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
SMIM12-203ENST00000426886 TTF2Q9UNY4 1162 aaKnown RBP15.4■□□□□ 0.06
SMIM12-203ENST00000426886 ZNF609O15014 1411 aa15.4■□□□□ 0.06
SMIM12-203ENST00000426886 PCNTO95613 3336 aa15.4■□□□□ 0.06
SMIM12-203ENST00000426886 MYO3BQ8WXR4 1341 aa15.4■□□□□ 0.06
SMIM12-203ENST00000426886 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
SMIM12-203ENST00000426886 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
SMIM12-203ENST00000426886 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
SMIM12-203ENST00000426886 ABCF2Q9UG63 623 aa15.4■□□□□ 0.06
SMIM12-203ENST00000426886 RAB11FIP3O75154 756 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 SCARF1Q14162 830 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 NBPF9Q3BBW0 867 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 CCDC158Q5M9N0 1113 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 DLK2Q6UY11 383 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 DCTPP1Q9H773 170 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 HDAC9Q9UKV0 1011 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
SMIM12-203ENST00000426886 FMR1Q06787 632 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMIM12-203ENST00000426886 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 LRRCC1Q9C099 1032 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 DENND2AQ9ULE3 1009 aa15.39■□□□□ 0.05
SMIM12-203ENST00000426886 IFIT2P09913 472 aaKnown RBP15.38■□□□□ 0.05
SMIM12-203ENST00000426886 TBC1D9Q6ZT07 1266 aa15.38■□□□□ 0.05
SMIM12-203ENST00000426886 NDUFB9Q9Y6M9 179 aa15.38■□□□□ 0.05
SMIM12-203ENST00000426886 SCN4AP35499 1836 aa15.38■□□□□ 0.05
SMIM12-203ENST00000426886 HMG20BQ9P0W2 317 aa15.38■□□□□ 0.05
SMIM12-203ENST00000426886 COL1A1P02452 1464 aaPredicted RBP15.38■□□□□ 0.05
SMIM12-203ENST00000426886 PRDX5P30044 214 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 MCAMP43121 646 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 WDR66Q8TBY9 1149 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 TBC1D22AQ8WUA7 517 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 WNT10BO00744 389 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 DLGAP5Q15398 846 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 CFAP100Q494V2 611 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 SPATA5Q8NB90 893 aa15.37■□□□□ 0.05
SMIM12-203ENST00000426886 GLIS2Q9BZE0 524 aaPredicted RBP15.37■□□□□ 0.05
SMIM12-203ENST00000426886 TRAF5O00463 557 aa15.36■□□□□ 0.05
SMIM12-203ENST00000426886 ANGEL2Q5VTE6 544 aaKnown RBP15.36■□□□□ 0.05
SMIM12-203ENST00000426886 GGA3Q9NZ52 723 aa15.36■□□□□ 0.05
SMIM12-203ENST00000426886 HTRA3P83110 453 aa15.36■□□□□ 0.05
SMIM12-203ENST00000426886 IGHDP01880 384 aa15.35■□□□□ 0.05
SMIM12-203ENST00000426886 FKBP1AP62942 108 aaKnown RBP15.35■□□□□ 0.05
SMIM12-203ENST00000426886 FSTL1Q12841 308 aa15.35■□□□□ 0.05
SMIM12-203ENST00000426886 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
SMIM12-203ENST00000426886 USP48Q86UV5 1035 aa15.35■□□□□ 0.05
SMIM12-203ENST00000426886 PRMT6Q96LA8 375 aaPredicted RBP15.35■□□□□ 0.05
SMIM12-203ENST00000426886 SEMA3EO15041 775 aa15.35■□□□□ 0.05
SMIM12-203ENST00000426886 LDHBP07195 334 aaKnown RBP15.35■□□□□ 0.05
SMIM12-203ENST00000426886 UQCRFS1P1P0C7P4 283 aa15.35■□□□□ 0.05
SMIM12-203ENST00000426886 ARID4AP29374 1257 aaPredicted RBP15.35■□□□□ 0.05
SMIM12-203ENST00000426886 DIXDC1Q155Q3 683 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms