RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 DCPSQ96C86 337 aaKnown RBP21.38■■□□□ 1.01
LMCD1-204ENST00000426878 GLIS2Q9BZE0 524 aaPredicted RBP21.38■■□□□ 1.01
LMCD1-204ENST00000426878 HDAC9Q9UKV0 1011 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 TRAF5O00463 557 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 ZBTB22O15209 634 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 BCAMP50895 628 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 SCARF1Q14162 830 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.38■■□□□ 1.01
LMCD1-204ENST00000426878 KLRG1Q96E93 195 aa21.38■■□□□ 1.01
LMCD1-204ENST00000426878 POLR2AP24928 1970 aaKnown RBP21.37■■□□□ 1.01
LMCD1-204ENST00000426878 PITPNM2Q9BZ72 1349 aa21.37■■□□□ 1.01
LMCD1-204ENST00000426878 TRPM7Q96QT4 1865 aa21.37■■□□□ 1.01
LMCD1-204ENST00000426878 KRT26Q7Z3Y9 468 aa21.37■■□□□ 1.01
LMCD1-204ENST00000426878 C1orf115Q9H7X2 142 aa21.37■■□□□ 1.01
LMCD1-204ENST00000426878 GGA3Q9NZ52 723 aa21.37■■□□□ 1.01
LMCD1-204ENST00000426878 DDX19BQ9UMR2 479 aa21.37■■□□□ 1.01
LMCD1-204ENST00000426878 WNT10BO00744 389 aa21.36■■□□□ 1.01
LMCD1-204ENST00000426878 FMR1Q06787 632 aaKnown RBP eCLIP21.36■■□□□ 1.01
LMCD1-204ENST00000426878 MFSD14BQ5SR56 506 aa21.36■■□□□ 1.01
LMCD1-204ENST00000426878 CST9Q5W186 159 aa21.36■■□□□ 1.01
LMCD1-204ENST00000426878 USP48Q86UV5 1035 aa21.36■■□□□ 1.01
LMCD1-204ENST00000426878 MTMR14Q8NCE2 650 aa21.36■■□□□ 1.01
LMCD1-204ENST00000426878 ZBED3Q96IU2 234 aaPredicted RBP21.36■■□□□ 1.01
LMCD1-204ENST00000426878 AKAP2Q9Y2D5 859 aa21.36■■□□□ 1.01
LMCD1-204ENST00000426878 G3BP1Q13283 466 aaKnown RBP eCLIP21.35■■□□□ 1.01
LMCD1-204ENST00000426878 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
LMCD1-204ENST00000426878 JAG2Q9Y219 1238 aa21.35■■□□□ 1.01
LMCD1-204ENST00000426878 ASTN2O75129 1339 aaPredicted RBP21.34■■□□□ 1.01
LMCD1-204ENST00000426878 TFCP2Q12800 502 aa21.34■■□□□ 1.01
LMCD1-204ENST00000426878 NBPF9Q3BBW0 867 aa21.34■■□□□ 1.01
LMCD1-204ENST00000426878 ANGEL2Q5VTE6 544 aaKnown RBP21.34■■□□□ 1.01
LMCD1-204ENST00000426878 SULF1Q8IWU6 871 aa21.34■■□□□ 1.01
LMCD1-204ENST00000426878 CHMP4BQ9H444 224 aaKnown RBP21.34■■□□□ 1.01
LMCD1-204ENST00000426878 COG6Q9Y2V7 657 aa21.34■■□□□ 1.01
LMCD1-204ENST00000426878 FRAT2O75474 233 aaPredicted RBP21.33■■□□□ 1.01
LMCD1-204ENST00000426878 CEP85Q6P2H3 762 aa21.33■■□□□ 1.01
LMCD1-204ENST00000426878 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
LMCD1-204ENST00000426878 IQSEC3Q9UPP2 1182 aaPredicted RBP21.33■■□□□ 1.01
LMCD1-204ENST00000426878 NOP58Q9Y2X3 529 aaKnown RBP21.33■■□□□ 1.01
LMCD1-204ENST00000426878 PCNTO95613 3336 aa21.33■■□□□ 1.01
LMCD1-204ENST00000426878 JMYQ8N9B5 988 aa21.32■■□□□ 1
LMCD1-204ENST00000426878 YTHDC1Q96MU7 727 aaKnown RBP21.32■■□□□ 1
LMCD1-204ENST00000426878 GNL3LQ9NVN8 582 aaKnown RBP21.32■■□□□ 1
LMCD1-204ENST00000426878 SUGT1Q9Y2Z0 365 aa21.32■■□□□ 1
LMCD1-204ENST00000426878 ARAP2Q8WZ64 1704 aa21.32■■□□□ 1
LMCD1-204ENST00000426878 CNTNAP1P78357 1384 aa21.31■■□□□ 1
LMCD1-204ENST00000426878 A0A1B0GUL7 405 aa21.31■■□□□ 1
LMCD1-204ENST00000426878 RASSF10A6NK89 507 aa21.31■■□□□ 1
LMCD1-204ENST00000426878 SEMA3EO15041 775 aa21.31■■□□□ 1
LMCD1-204ENST00000426878 CELF2O95319 508 aaKnown RBP21.31■■□□□ 1
LMCD1-204ENST00000426878 TIMM10P62072 90 aa21.31■■□□□ 1
LMCD1-204ENST00000426878 DLGAP5Q15398 846 aa21.31■■□□□ 1
LMCD1-204ENST00000426878 ADM5C9JUS6 153 aa21.3■■□□□ 1
LMCD1-204ENST00000426878 F8W031 263 aaPredicted RBP21.3■■□□□ 1
LMCD1-204ENST00000426878 CHAF1AQ13111 956 aaPredicted RBP21.3■■□□□ 1
LMCD1-204ENST00000426878 C20orf194Q5TEA3 1177 aa21.3■■□□□ 1
LMCD1-204ENST00000426878 WDR66Q8TBY9 1149 aa21.3■■□□□ 1
LMCD1-204ENST00000426878 GPR108Q9NPR9 543 aa21.3■■□□□ 1
LMCD1-204ENST00000426878 SERPINA10Q9UK55 444 aa21.3■■□□□ 1
LMCD1-204ENST00000426878 TTF2Q9UNY4 1162 aaKnown RBP21.3■■□□□ 1
LMCD1-204ENST00000426878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.3■■□□□ 1
LMCD1-204ENST00000426878 SURF6O75683 361 aaKnown RBP21.29■■□□□ 1
LMCD1-204ENST00000426878 ADORA1P30542 326 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
LMCD1-204ENST00000426878 CFAP100Q494V2 611 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 CCDC102BQ68D86 513 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 RPAP2Q8IXW5 612 aaPredicted RBP21.29■■□□□ 1
LMCD1-204ENST00000426878 MRIQ9BWK5 157 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 TLL2Q9Y6L7 1015 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 SPDYE2BA6NHP3 402 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 SPDYE6P0CI01 402 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 PHKA1P46020 1223 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 DLK2Q6UY11 383 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 XAGE2Q96GT9 111 aa21.29■■□□□ 1
LMCD1-204ENST00000426878 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
LMCD1-204ENST00000426878 ABT1Q9ULW3 272 aaKnown RBP21.29■■□□□ 1
LMCD1-204ENST00000426878 MYH13Q9UKX3 1938 aa21.28■■□□□ 1
LMCD1-204ENST00000426878 GRIK5Q16478 980 aa21.28■■□□□ 1
LMCD1-204ENST00000426878 DEFB115Q30KQ5 88 aa21.28■■□□□ 1
LMCD1-204ENST00000426878 SAPCD2Q86UD0 394 aa21.28■■□□□ 1
LMCD1-204ENST00000426878 DENND2AQ9ULE3 1009 aa21.28■■□□□ 1
LMCD1-204ENST00000426878 COL1A1P02452 1464 aaPredicted RBP21.27■■□□□ 1
LMCD1-204ENST00000426878 APOBEC3FQ8IUX4 373 aaKnown RBP21.27■■□□□ 1
LMCD1-204ENST00000426878 HHIPL1Q96JK4 782 aa21.27■■□□□ 1
LMCD1-204ENST00000426878 PRMT6Q96LA8 375 aaPredicted RBP21.27■■□□□ 1
LMCD1-204ENST00000426878 PDS5AQ29RF7 1337 aaKnown RBP21.27■□□□□ 0.99
LMCD1-204ENST00000426878 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
LMCD1-204ENST00000426878 MYO1BO43795 1136 aa21.26■□□□□ 0.99
LMCD1-204ENST00000426878 OS9Q13438 667 aaPredicted RBP21.26■□□□□ 0.99
LMCD1-204ENST00000426878 CDCA5Q96FF9 252 aa21.26■□□□□ 0.99
LMCD1-204ENST00000426878 NEUROD6Q96NK8 337 aa21.26■□□□□ 0.99
LMCD1-204ENST00000426878 ZNF408Q9H9D4 720 aa21.26■□□□□ 0.99
LMCD1-204ENST00000426878 SALL1Q9NSC2 1324 aa21.26■□□□□ 0.99
LMCD1-204ENST00000426878 PCDHAC2Q9Y5I4 1007 aa21.25■□□□□ 0.99
LMCD1-204ENST00000426878 MAST3O60307 1309 aa21.25■□□□□ 0.99
LMCD1-204ENST00000426878 CRKP46108 304 aa21.24■□□□□ 0.99
LMCD1-204ENST00000426878 VEGFBP49765 207 aa21.24■□□□□ 0.99
LMCD1-204ENST00000426878 RBM5P52756 815 aaKnown RBP eCLIP21.24■□□□□ 0.99
LMCD1-204ENST00000426878 GBA2Q9HCG7 927 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms