RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ANAPC15P60006 121 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
GINS3-203ENST00000426538 DPP8Q6V1X1 898 aaPredicted RBP18.15■□□□□ 0.5
GINS3-203ENST00000426538 KIF2CQ99661 725 aa18.15■□□□□ 0.5
GINS3-203ENST00000426538 IRS2Q9Y4H2 1338 aa18.14■□□□□ 0.5
GINS3-203ENST00000426538 UBE3CQ15386 1083 aa18.14■□□□□ 0.49
GINS3-203ENST00000426538 SLFNL1Q499Z3 407 aa18.14■□□□□ 0.49
GINS3-203ENST00000426538 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
GINS3-203ENST00000426538 MAP4K1Q92918 833 aa18.14■□□□□ 0.49
GINS3-203ENST00000426538 C10orf71Q711Q0 1435 aa18.13■□□□□ 0.49
GINS3-203ENST00000426538 ZBTB22O15209 634 aa18.13■□□□□ 0.49
GINS3-203ENST00000426538 OSBP2Q969R2 916 aa18.13■□□□□ 0.49
GINS3-203ENST00000426538 GPR101Q96P66 508 aaPredicted RBP18.13■□□□□ 0.49
GINS3-203ENST00000426538 PDS5AQ29RF7 1337 aaKnown RBP18.13■□□□□ 0.49
GINS3-203ENST00000426538 PDE6AP16499 860 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 RABEP1Q15276 862 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 MAGEB6Q8N7X4 407 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
GINS3-203ENST00000426538 ZNF532Q9HCE3 1301 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
GINS3-203ENST00000426538 OLFM4Q6UX06 510 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 TDRD7Q8NHU6 1098 aaKnown RBP18.12■□□□□ 0.49
GINS3-203ENST00000426538 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
GINS3-203ENST00000426538 MAST3O60307 1309 aa18.12■□□□□ 0.49
GINS3-203ENST00000426538 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
GINS3-203ENST00000426538 M0R2C6 588 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 ZKSCAN1P17029 563 aaPredicted RBP18.11■□□□□ 0.49
GINS3-203ENST00000426538 RNF20Q5VTR2 975 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 CC2D2BQ6DHV5 1058 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
GINS3-203ENST00000426538 TTLL6Q8N841 843 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 EYA3Q99504 573 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 PUS7LQ9H0K6 701 aaKnown RBP18.11■□□□□ 0.49
GINS3-203ENST00000426538 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
GINS3-203ENST00000426538 MYH7P12883 1935 aa18.11■□□□□ 0.49
GINS3-203ENST00000426538 A0A0G2JLW4 131 aa18.1■□□□□ 0.49
GINS3-203ENST00000426538 RIMBP2O15034 1052 aa18.1■□□□□ 0.49
GINS3-203ENST00000426538 TGFB2P61812 414 aa18.1■□□□□ 0.49
GINS3-203ENST00000426538 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
GINS3-203ENST00000426538 WDR66Q8TBY9 1149 aa18.1■□□□□ 0.49
GINS3-203ENST00000426538 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
GINS3-203ENST00000426538 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
GINS3-203ENST00000426538 G3V3G9 751 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 IL1R1P14778 569 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 DCAF8Q5TAQ9 597 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 SPTY2D1Q68D10 685 aaPredicted RBP18.09■□□□□ 0.49
GINS3-203ENST00000426538 AIDAQ96BJ3 306 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 DSCC1Q9BVC3 393 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 TCRBV5S4A2TA0A5A2 114 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 GPAA1O43292 621 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 HSPD1P10809 573 aaKnown RBP18.09■□□□□ 0.49
GINS3-203ENST00000426538 DPEP1P16444 411 aa18.09■□□□□ 0.49
GINS3-203ENST00000426538 MYO5AQ9Y4I1 1855 aaKnown RBP18.08■□□□□ 0.49
GINS3-203ENST00000426538 COL1A1P02452 1464 aaPredicted RBP18.08■□□□□ 0.49
GINS3-203ENST00000426538 MYH13Q9UKX3 1938 aa18.08■□□□□ 0.48
GINS3-203ENST00000426538 CREB3L3Q68CJ9 461 aa18.08■□□□□ 0.48
GINS3-203ENST00000426538 HSCBQ8IWL3 235 aa18.08■□□□□ 0.48
GINS3-203ENST00000426538 COA1Q9GZY4 146 aa18.08■□□□□ 0.48
GINS3-203ENST00000426538 PPP1R1BQ9UD71 204 aaPredicted RBP18.08■□□□□ 0.48
GINS3-203ENST00000426538 SNX14Q9Y5W7 946 aa18.08■□□□□ 0.48
GINS3-203ENST00000426538 SLX4Q8IY92 1834 aa18.08■□□□□ 0.48
GINS3-203ENST00000426538 DOCK2Q92608 1830 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 ST18O60284 1047 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 CYP7A1P22680 504 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 GRIPAP1Q4V328 841 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 C7orf43Q8WVR3 580 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 SNX21Q969T3 373 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 JAG2Q9Y219 1238 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 SALL1Q9NSC2 1324 aa18.07■□□□□ 0.48
GINS3-203ENST00000426538 C21orf2O43822 256 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 IGSF3O75054 1194 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 NAA16Q6N069 864 aaPredicted RBP18.06■□□□□ 0.48
GINS3-203ENST00000426538 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 IL17RAQ96F46 866 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 TBC1D2Q9BYX2 928 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 LTBP1Q14766 1721 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 SLC27A2O14975 620 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 LDHBP07195 334 aaKnown RBP18.06■□□□□ 0.48
GINS3-203ENST00000426538 KCNA3P22001 575 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 NEK4P51957 841 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 TMED8Q6PL24 325 aaPredicted RBP18.06■□□□□ 0.48
GINS3-203ENST00000426538 SUPT20HQ8NEM7 779 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 KCNB2Q92953 911 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 PIM2Q9P1W9 311 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 CTNNA3Q9UI47 895 aa18.06■□□□□ 0.48
GINS3-203ENST00000426538 APPP05067 770 aa18.04■□□□□ 0.48
GINS3-203ENST00000426538 PRDX5P30044 214 aa18.04■□□□□ 0.48
GINS3-203ENST00000426538 DZIP1Q86YF9 867 aaKnown RBP18.04■□□□□ 0.48
GINS3-203ENST00000426538 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
GINS3-203ENST00000426538 TBC1D22AQ8WUA7 517 aa18.04■□□□□ 0.48
GINS3-203ENST00000426538 NSUN4Q96CB9 384 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms