RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 CRTC2Q53ET0 693 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 PLA2G2CQ5R387 149 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 MORC1Q86VD1 984 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 LDHDQ86WU2 507 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 GPR101Q96P66 508 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 ZMIZ1Q9ULJ6 1067 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 PARP3Q9Y6F1 533 aa8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 SMG6Q86US8 1419 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-207ENST00000426253 THSD7BQ9C0I4 1608 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 KIF7Q2M1P5 1343 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 PITPNM2Q9BZ72 1349 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 CARNS1A5YM72 827 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 CD2BP2O95400 341 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 CHRNA5P30532 468 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 ECE1P42892 770 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 TMEM164Q5U3C3 297 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 LARGE2Q8N3Y3 721 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 FAM200AQ8TCP9 573 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 CAPNS2Q96L46 248 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 MAP4K5Q9Y4K4 846 aa8.36□□□□□ -1.07
NIF3L1-207ENST00000426253 SKOR1P84550 965 aa8.35□□□□□ -1.07
NIF3L1-207ENST00000426253 USP4Q13107 963 aa8.35□□□□□ -1.07
NIF3L1-207ENST00000426253 EAPPQ56P03 285 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-207ENST00000426253 CYP4F22Q6NT55 531 aa8.35□□□□□ -1.07
NIF3L1-207ENST00000426253 ANKMY2Q8IV38 441 aa8.35□□□□□ -1.07
NIF3L1-207ENST00000426253 NLGN1Q8N2Q7 840 aa8.35□□□□□ -1.07
NIF3L1-207ENST00000426253 OGFOD1Q8N543 542 aa8.35□□□□□ -1.07
NIF3L1-207ENST00000426253 ZBTB7BO15156 539 aaPredicted RBP8.34□□□□□ -1.07
NIF3L1-207ENST00000426253 CA12O43570 354 aa8.34□□□□□ -1.07
NIF3L1-207ENST00000426253 B4GALNT3Q6L9W6 998 aa8.34□□□□□ -1.07
NIF3L1-207ENST00000426253 MPNDQ8N594 471 aa8.34□□□□□ -1.07
NIF3L1-207ENST00000426253 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
NIF3L1-207ENST00000426253 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
NIF3L1-207ENST00000426253 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
NIF3L1-207ENST00000426253 IQCA1LA6NCM1 817 aa8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 CLDN10P78369 228 aa8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 EIF4A2Q14240 407 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 MPRIPQ6WCQ1 1025 aa8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 CDK15Q96Q40 435 aa8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 SPG7Q9UQ90 795 aa8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 KIF20BQ96Q89 1820 aa8.33□□□□□ -1.08
NIF3L1-207ENST00000426253 AOC2O75106 756 aa8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 DDNO94850 711 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 DKK1O94907 266 aa8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 CNGB1Q14028 1251 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 CC2D1BQ5T0F9 858 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 SIX5Q8N196 739 aa8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 LINC00116Q8NCU8 138 aa8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 ADAMTS7Q9UKP4 1686 aa8.32□□□□□ -1.08
NIF3L1-207ENST00000426253 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 MEGF6O75095 1541 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 CYP27B1O15528 508 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 MTHFSP49914 203 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 GTF2IP78347 998 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 DPYDQ12882 1025 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 SWI5Q1ZZU3 235 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 TRAPPC3LQ5T215 181 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 RC3H1Q5TC82 1133 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 VASH1Q7L8A9 365 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 EHBP1Q8NDI1 1231 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 SMARCC1Q92922 1105 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 CLP1Q92989 425 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 GZF1Q9H116 711 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 PCDHB11Q9Y5F2 797 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 PCDHGA11Q9Y5H2 935 aa8.31□□□□□ -1.08
NIF3L1-207ENST00000426253 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 RGPD2P0DJD1 1756 aa8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 MAP2K2P36507 400 aa8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 MAP1SQ66K74 1059 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 IFNL2Q8IZJ0 200 aa8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 CNTROBQ8N137 903 aa8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 TAF1DQ9H5J8 278 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 MAP2P11137 1827 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-207ENST00000426253 NFKBIEO00221 500 aa8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 PHKG2P15735 406 aa8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 IL13P35225 146 aa8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 SEC13P55735 322 aa8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 PLEKHO1Q53GL0 409 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 CCDC102BQ68D86 513 aa8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 RTCBQ9Y3I0 505 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-207ENST00000426253 SIAH2O43255 324 aa8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 GYS1P13807 737 aa8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 RFC4P35249 363 aa8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 DHX9Q08211 1270 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 AMOTQ4VCS5 1084 aa8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 SULT6B1Q6IMI4 303 aa8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 ZNF594Q96JF6 807 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 RBM19Q9Y4C8 960 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 SCN4AP35499 1836 aa8.28□□□□□ -1.08
NIF3L1-207ENST00000426253 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
NIF3L1-207ENST00000426253 LOC102724428A0A0B4J2F2 783 aa8.27□□□□□ -1.09
NIF3L1-207ENST00000426253 ERVH48-1M5A8F1 160 aa8.27□□□□□ -1.09
NIF3L1-207ENST00000426253 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms