RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CAP1Q01518 475 aa18.29■□□□□ 0.52
HDAC6-206ENST00000426196 MTMR14Q8NCE2 650 aa18.29■□□□□ 0.52
HDAC6-206ENST00000426196 PTPN18Q99952 460 aa18.29■□□□□ 0.52
HDAC6-206ENST00000426196 KCNJ4P48050 445 aa18.28■□□□□ 0.52
HDAC6-206ENST00000426196 CHRDL2Q6WN34 429 aa18.28■□□□□ 0.52
HDAC6-206ENST00000426196 ANKRD2Q9GZV1 360 aa18.28■□□□□ 0.52
HDAC6-206ENST00000426196 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
HDAC6-206ENST00000426196 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
HDAC6-206ENST00000426196 CLRN2A0PK11 232 aa18.27■□□□□ 0.52
HDAC6-206ENST00000426196 KLRK1P26718 216 aa18.27■□□□□ 0.52
HDAC6-206ENST00000426196 TAF1CQ15572 869 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-206ENST00000426196 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-206ENST00000426196 ZFYVE28Q9HCC9 887 aa18.27■□□□□ 0.52
HDAC6-206ENST00000426196 USP2O75604 605 aaPredicted RBP18.26■□□□□ 0.51
HDAC6-206ENST00000426196 MYCP01106 439 aaPredicted RBP18.26■□□□□ 0.51
HDAC6-206ENST00000426196 CFAP100Q494V2 611 aa18.26■□□□□ 0.51
HDAC6-206ENST00000426196 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
HDAC6-206ENST00000426196 OPTNQ96CV9 577 aa18.26■□□□□ 0.51
HDAC6-206ENST00000426196 CD209Q9NNX6 404 aa18.26■□□□□ 0.51
HDAC6-206ENST00000426196 SPDYE2BA6NHP3 402 aa18.25■□□□□ 0.51
HDAC6-206ENST00000426196 DLL1O00548 723 aa18.25■□□□□ 0.51
HDAC6-206ENST00000426196 WDHD1O75717 1129 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-206ENST00000426196 SPDYE6P0CI01 402 aa18.25■□□□□ 0.51
HDAC6-206ENST00000426196 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
HDAC6-206ENST00000426196 ELP3Q9H9T3 547 aa18.25■□□□□ 0.51
HDAC6-206ENST00000426196 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
HDAC6-206ENST00000426196 LAMA3Q16787 3333 aa18.25■□□□□ 0.51
HDAC6-206ENST00000426196 F8W031 263 aaPredicted RBP18.24■□□□□ 0.51
HDAC6-206ENST00000426196 NEXNQ0ZGT2 675 aa18.24■□□□□ 0.51
HDAC6-206ENST00000426196 RASA3Q14644 834 aa18.24■□□□□ 0.51
HDAC6-206ENST00000426196 CERS5Q8N5B7 392 aa18.24■□□□□ 0.51
HDAC6-206ENST00000426196 SLC17A8Q8NDX2 589 aa18.24■□□□□ 0.51
HDAC6-206ENST00000426196 MS4A4AQ96JQ5 239 aa18.24■□□□□ 0.51
HDAC6-206ENST00000426196 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
HDAC6-206ENST00000426196 PCDHAC2Q9Y5I4 1007 aa18.24■□□□□ 0.51
HDAC6-206ENST00000426196 CCL15-CCL14A0A0B4J2E2 113 aa18.23■□□□□ 0.51
HDAC6-206ENST00000426196 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-206ENST00000426196 GTF2A2P52657 109 aa18.23■□□□□ 0.51
HDAC6-206ENST00000426196 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
HDAC6-206ENST00000426196 KIF22Q14807 665 aa18.23■□□□□ 0.51
HDAC6-206ENST00000426196 CCL15Q16663 113 aa18.23■□□□□ 0.51
HDAC6-206ENST00000426196 SH3TC2Q8TF17 1288 aa18.23■□□□□ 0.51
HDAC6-206ENST00000426196 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
HDAC6-206ENST00000426196 ZSWIM8A7E2V4 1837 aa18.22■□□□□ 0.51
HDAC6-206ENST00000426196 IGKV5-2P06315 115 aa18.22■□□□□ 0.51
HDAC6-206ENST00000426196 ITGA6P23229 1130 aa18.22■□□□□ 0.51
HDAC6-206ENST00000426196 RBM5P52756 815 aaKnown RBP eCLIP18.22■□□□□ 0.51
HDAC6-206ENST00000426196 RALBP1Q15311 655 aa18.22■□□□□ 0.51
HDAC6-206ENST00000426196 CCDC30Q5VVM6 783 aa18.22■□□□□ 0.51
HDAC6-206ENST00000426196 DPF3Q92784 378 aa18.22■□□□□ 0.51
HDAC6-206ENST00000426196 PRMT6Q96LA8 375 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-206ENST00000426196 RBM27Q9P2N5 1060 aaKnown RBP18.22■□□□□ 0.51
HDAC6-206ENST00000426196 WDR43Q15061 677 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDAC6-206ENST00000426196 KSR2Q6VAB6 950 aa18.21■□□□□ 0.51
HDAC6-206ENST00000426196 UBE3BQ7Z3V4 1068 aa18.21■□□□□ 0.51
HDAC6-206ENST00000426196 A0A1B0GUL6 1792 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 GNRH1P01148 92 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 FKBP1AP62942 108 aaKnown RBP18.2■□□□□ 0.5
HDAC6-206ENST00000426196 CHRNDQ07001 517 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 ZNF804AQ7Z570 1209 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 CSADQ9Y600 493 aa18.2■□□□□ 0.5
HDAC6-206ENST00000426196 ZNF853P0CG23 659 aa18.19■□□□□ 0.5
HDAC6-206ENST00000426196 PRMT2P55345 433 aa18.19■□□□□ 0.5
HDAC6-206ENST00000426196 GNAI1P63096 354 aa18.19■□□□□ 0.5
HDAC6-206ENST00000426196 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
HDAC6-206ENST00000426196 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
HDAC6-206ENST00000426196 ARAP2Q8WZ64 1704 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 LACTBP83111 547 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-206ENST00000426196 VGLL4Q14135 290 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
HDAC6-206ENST00000426196 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-206ENST00000426196 C15orf52Q6ZUT6 534 aaKnown RBP18.18■□□□□ 0.5
HDAC6-206ENST00000426196 NKX2-3Q8TAU0 364 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 HTATIP2Q9BUP3 242 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 AOX1Q06278 1338 aa18.18■□□□□ 0.5
HDAC6-206ENST00000426196 TLR2O60603 784 aa18.17■□□□□ 0.5
HDAC6-206ENST00000426196 IL1R1P14778 569 aa18.17■□□□□ 0.5
HDAC6-206ENST00000426196 MAP3K9P80192 1104 aa18.17■□□□□ 0.5
HDAC6-206ENST00000426196 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
HDAC6-206ENST00000426196 SHISA4Q96DD7 197 aa18.17■□□□□ 0.5
HDAC6-206ENST00000426196 ARHGAP39Q9C0H5 1083 aa18.17■□□□□ 0.5
HDAC6-206ENST00000426196 ZCCHC17Q9NP64 241 aaKnown RBP18.17■□□□□ 0.5
HDAC6-206ENST00000426196 H7C1W4 665 aa18.16■□□□□ 0.5
HDAC6-206ENST00000426196 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
HDAC6-206ENST00000426196 ZNF70Q9UC06 446 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-206ENST00000426196 JAG2Q9Y219 1238 aa18.16■□□□□ 0.5
HDAC6-206ENST00000426196 NR2E3Q9Y5X4 410 aa18.16■□□□□ 0.5
HDAC6-206ENST00000426196 IRS2Q9Y4H2 1338 aa18.16■□□□□ 0.5
HDAC6-206ENST00000426196 SNAP23O00161 211 aa18.15■□□□□ 0.5
HDAC6-206ENST00000426196 CETPP11597 493 aa18.15■□□□□ 0.5
HDAC6-206ENST00000426196 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
HDAC6-206ENST00000426196 TAF5LO75529 589 aa18.14■□□□□ 0.49
HDAC6-206ENST00000426196 TNNI2P48788 182 aa18.14■□□□□ 0.49
HDAC6-206ENST00000426196 MTFR1Q15390 333 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms