RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 VGLL2Q8N8G2 317 aa21.81■■□□□ 1.08
SLC6A1-202ENST00000425938 FBXO3Q9UK99 471 aa21.81■■□□□ 1.08
SLC6A1-202ENST00000425938 ADM5C9JUS6 153 aa21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 SASH1O94885 1247 aa21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 CTCFP49711 727 aaPredicted RBP21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 FKBP1AP62942 108 aaKnown RBP21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 GRM1Q13255 1194 aa21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 PUM3Q15397 648 aaKnown RBP21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 CAVIN4Q5BKX8 364 aa21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 FAM84BQ96KN1 310 aaPredicted RBP21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 TNNQ9UQP3 1299 aa21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 ASTN2O75129 1339 aaPredicted RBP21.8■■□□□ 1.08
SLC6A1-202ENST00000425938 DLK2Q6UY11 383 aa21.79■■□□□ 1.08
SLC6A1-202ENST00000425938 FTSJ3Q8IY81 847 aaKnown RBP21.79■■□□□ 1.08
SLC6A1-202ENST00000425938 TNS4Q8IZW8 715 aa21.79■■□□□ 1.08
SLC6A1-202ENST00000425938 TDRD7Q8NHU6 1098 aaKnown RBP21.79■■□□□ 1.08
SLC6A1-202ENST00000425938 THSD7BQ9C0I4 1608 aa21.79■■□□□ 1.08
SLC6A1-202ENST00000425938 PITPNM2Q9BZ72 1349 aa21.79■■□□□ 1.08
SLC6A1-202ENST00000425938 CIAO1O76071 339 aa21.78■■□□□ 1.08
SLC6A1-202ENST00000425938 IFIT1P09914 478 aaKnown RBP21.78■■□□□ 1.08
SLC6A1-202ENST00000425938 MAP2K2P36507 400 aa21.78■■□□□ 1.08
SLC6A1-202ENST00000425938 CERS5Q8N5B7 392 aa21.78■■□□□ 1.08
SLC6A1-202ENST00000425938 SIL1Q9H173 461 aa21.78■■□□□ 1.08
SLC6A1-202ENST00000425938 JAG2Q9Y219 1238 aa21.78■■□□□ 1.08
SLC6A1-202ENST00000425938 FAM205AQ6ZU69 1335 aa21.78■■□□□ 1.08
SLC6A1-202ENST00000425938 FRAT2O75474 233 aaPredicted RBP21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 GNAI2P04899 355 aa21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 SLC5A1P13866 664 aa21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 NBPF9Q3BBW0 867 aa21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 FBXO33Q7Z6M2 555 aa21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 TMEM57Q8N5G2 664 aa21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 C2orf69Q8N8R5 385 aa21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 GBA2Q9HCG7 927 aaPredicted RBP21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 PRDM10Q9NQV6 1147 aa21.77■■□□□ 1.08
SLC6A1-202ENST00000425938 WNT10BO00744 389 aa21.76■■□□□ 1.07
SLC6A1-202ENST00000425938 SRGAP3O43295 1099 aa21.76■■□□□ 1.07
SLC6A1-202ENST00000425938 HUNKP57058 714 aa21.76■■□□□ 1.07
SLC6A1-202ENST00000425938 ATG9AQ7Z3C6 839 aa21.76■■□□□ 1.07
SLC6A1-202ENST00000425938 COPRSQ9NQ92 184 aa21.76■■□□□ 1.07
SLC6A1-202ENST00000425938 CEP126Q9P2H0 1117 aa21.76■■□□□ 1.07
SLC6A1-202ENST00000425938 MYH13Q9UKX3 1938 aa21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 F8W031 263 aaPredicted RBP21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 FGFR2P21802 821 aa21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 IL15P40933 162 aaPredicted RBP21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 DLGAP5Q15398 846 aa21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 MFSD14BQ5SR56 506 aa21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 DZIP1LQ8IYY4 767 aaKnown RBP21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 LPIN2Q92539 896 aa21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 BEGAINQ9BUH8 593 aa21.75■■□□□ 1.07
SLC6A1-202ENST00000425938 AOC2O75106 756 aa21.74■■□□□ 1.07
SLC6A1-202ENST00000425938 MTX1Q13505 466 aa21.74■■□□□ 1.07
SLC6A1-202ENST00000425938 CDCA5Q96FF9 252 aa21.74■■□□□ 1.07
SLC6A1-202ENST00000425938 PA2G4Q9UQ80 394 aaKnown RBP21.74■■□□□ 1.07
SLC6A1-202ENST00000425938 ARAP2Q8WZ64 1704 aa21.74■■□□□ 1.07
SLC6A1-202ENST00000425938 ECM29Q5VYK3 1845 aa21.73■■□□□ 1.07
SLC6A1-202ENST00000425938 IQSEC3Q9UPP2 1182 aaPredicted RBP21.73■■□□□ 1.07
SLC6A1-202ENST00000425938 BCAMP50895 628 aa21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 LBX1P52954 281 aa21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 CHAF1AQ13111 956 aaPredicted RBP21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 ATP2B3Q16720 1220 aa21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 APOBEC3FQ8IUX4 373 aaKnown RBP21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 ITPRIPQ8IWB1 547 aa21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 MTMR14Q8NCE2 650 aa21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 TBC1D22AQ8WUA7 517 aa21.72■■□□□ 1.07
SLC6A1-202ENST00000425938 MYO1BO43795 1136 aa21.71■■□□□ 1.07
SLC6A1-202ENST00000425938 HSPA8P11142 646 aaKnown RBP21.71■■□□□ 1.07
SLC6A1-202ENST00000425938 NOGQ13253 232 aa21.71■■□□□ 1.07
SLC6A1-202ENST00000425938 CFAP100Q494V2 611 aa21.71■■□□□ 1.07
SLC6A1-202ENST00000425938 RGMBQ6NW40 437 aa21.71■■□□□ 1.07
SLC6A1-202ENST00000425938 ZBED3Q96IU2 234 aaPredicted RBP21.71■■□□□ 1.07
SLC6A1-202ENST00000425938 TTF2Q9UNY4 1162 aaKnown RBP21.71■■□□□ 1.07
SLC6A1-202ENST00000425938 RBM5P52756 815 aaKnown RBP eCLIP21.7■■□□□ 1.06
SLC6A1-202ENST00000425938 CCDC102AQ96A19 550 aa21.7■■□□□ 1.06
SLC6A1-202ENST00000425938 SCAF8Q9UPN6 1271 aaKnown RBP21.7■■□□□ 1.06
SLC6A1-202ENST00000425938 FKBP1BP68106 108 aa21.69■■□□□ 1.06
SLC6A1-202ENST00000425938 SPDYE2BA6NHP3 402 aa21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 CA12O43570 354 aa21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 SPDYE6P0CI01 402 aa21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 MS4A1P11836 297 aa21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 RLBP1P12271 317 aa21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 NF2P35240 595 aa21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 GNL3LQ9NVN8 582 aaKnown RBP21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 SERPINA10Q9UK55 444 aa21.68■■□□□ 1.06
SLC6A1-202ENST00000425938 PAPPA2Q9BXP8 1791 aa21.67■■□□□ 1.06
SLC6A1-202ENST00000425938 ZNF157P51786 506 aaPredicted RBP21.67■■□□□ 1.06
SLC6A1-202ENST00000425938 AKAP2Q9Y2D5 859 aa21.67■■□□□ 1.06
SLC6A1-202ENST00000425938 COL1A1P02452 1464 aaPredicted RBP21.66■■□□□ 1.06
SLC6A1-202ENST00000425938 PNMA6EA0A0J9YXQ4 647 aa21.66■■□□□ 1.06
SLC6A1-202ENST00000425938 FAM155AB1AL88 458 aaPredicted RBP21.66■■□□□ 1.06
SLC6A1-202ENST00000425938 PRMT6Q96LA8 375 aaPredicted RBP21.66■■□□□ 1.06
SLC6A1-202ENST00000425938 PCDHAC2Q9Y5I4 1007 aa21.66■■□□□ 1.06
SLC6A1-202ENST00000425938 G3BP1Q13283 466 aaKnown RBP eCLIP21.65■■□□□ 1.06
SLC6A1-202ENST00000425938 PRAMEF18Q5VWM3 479 aa21.65■■□□□ 1.06
SLC6A1-202ENST00000425938 WDR66Q8TBY9 1149 aa21.65■■□□□ 1.06
SLC6A1-202ENST00000425938 RCAN3Q9UKA8 241 aa21.65■■□□□ 1.06
SLC6A1-202ENST00000425938 SUGT1Q9Y2Z0 365 aa21.65■■□□□ 1.06
SLC6A1-202ENST00000425938 MAST3O60307 1309 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 CLRN2A0PK11 232 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 ZBTB7BO15156 539 aaPredicted RBP21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 CRKP46108 304 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms