RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 DPY19L2Q6NUT2 758 aa19.04■□□□□ 0.64
SHOX2-202ENST00000425436 PLEKHM2Q8IWE5 1019 aa19.04■□□□□ 0.64
SHOX2-202ENST00000425436 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
SHOX2-202ENST00000425436 GLTPD2A6NH11 291 aa19.03■□□□□ 0.64
SHOX2-202ENST00000425436 GTF2IP78347 998 aa19.03■□□□□ 0.64
SHOX2-202ENST00000425436 CCDC102BQ68D86 513 aa19.03■□□□□ 0.64
SHOX2-202ENST00000425436 TDRD7Q8NHU6 1098 aaKnown RBP19.03■□□□□ 0.64
SHOX2-202ENST00000425436 MXD3Q9BW11 206 aa19.03■□□□□ 0.64
SHOX2-202ENST00000425436 DBNLQ9UJU6 430 aaKnown RBP19.03■□□□□ 0.64
SHOX2-202ENST00000425436 ZC3H4Q9UPT8 1303 aaKnown RBP19.03■□□□□ 0.64
SHOX2-202ENST00000425436 ARAP2Q8WZ64 1704 aa19.02■□□□□ 0.64
SHOX2-202ENST00000425436 USP17L3A6NCW0 530 aa19.02■□□□□ 0.64
SHOX2-202ENST00000425436 USP17L4A6NCW7 530 aa19.02■□□□□ 0.64
SHOX2-202ENST00000425436 FRAT2O75474 233 aaPredicted RBP19.02■□□□□ 0.64
SHOX2-202ENST00000425436 TNIP1Q15025 636 aa19.02■□□□□ 0.64
SHOX2-202ENST00000425436 TTLL5Q6EMB2 1281 aa19.02■□□□□ 0.64
SHOX2-202ENST00000425436 USP17L1Q7RTZ2 530 aa19.02■□□□□ 0.64
SHOX2-202ENST00000425436 ZBTB12Q9Y330 459 aaPredicted RBP19.02■□□□□ 0.64
SHOX2-202ENST00000425436 TBC1D32Q96NH3 1257 aa19.01■□□□□ 0.63
SHOX2-202ENST00000425436 SEC24BO95487 1268 aa19■□□□□ 0.63
SHOX2-202ENST00000425436 IFIT2P09913 472 aaKnown RBP19■□□□□ 0.63
SHOX2-202ENST00000425436 CHAF1AQ13111 956 aaPredicted RBP19■□□□□ 0.63
SHOX2-202ENST00000425436 C16orf71Q8IYS4 520 aaPredicted RBP19■□□□□ 0.63
SHOX2-202ENST00000425436 GPC2Q8N158 579 aa19■□□□□ 0.63
SHOX2-202ENST00000425436 OSBPL3Q9H4L5 887 aa19■□□□□ 0.63
SHOX2-202ENST00000425436 VIL1P09327 827 aaKnown RBP19■□□□□ 0.63
SHOX2-202ENST00000425436 DACT2Q5SW24 774 aa19■□□□□ 0.63
SHOX2-202ENST00000425436 GNL3LQ9NVN8 582 aaKnown RBP19■□□□□ 0.63
SHOX2-202ENST00000425436 TTC22Q5TAA0 569 aa18.99■□□□□ 0.63
SHOX2-202ENST00000425436 STRIP1Q5VSL9 837 aa18.99■□□□□ 0.63
SHOX2-202ENST00000425436 PSME4Q14997 1843 aa18.98■□□□□ 0.63
SHOX2-202ENST00000425436 GMPSP49915 693 aaPredicted RBP18.98■□□□□ 0.63
SHOX2-202ENST00000425436 BECN1Q14457 450 aa18.98■□□□□ 0.63
SHOX2-202ENST00000425436 CCDC158Q5M9N0 1113 aa18.98■□□□□ 0.63
SHOX2-202ENST00000425436 TTC39AQ5SRH9 613 aa18.98■□□□□ 0.63
SHOX2-202ENST00000425436 RSBN1LQ6PCB5 846 aaPredicted RBP18.98■□□□□ 0.63
SHOX2-202ENST00000425436 ANP32EQ9BTT0 268 aa18.98■□□□□ 0.63
SHOX2-202ENST00000425436 RRAGCQ9HB90 399 aa18.98■□□□□ 0.63
SHOX2-202ENST00000425436 MYH13Q9UKX3 1938 aa18.98■□□□□ 0.63
SHOX2-202ENST00000425436 CDC45O75419 566 aa18.97■□□□□ 0.63
SHOX2-202ENST00000425436 RASGRF1Q13972 1273 aa18.97■□□□□ 0.63
SHOX2-202ENST00000425436 SCARF1Q14162 830 aa18.97■□□□□ 0.63
SHOX2-202ENST00000425436 CASC1Q6TDU7 716 aa18.97■□□□□ 0.63
SHOX2-202ENST00000425436 ZNF646O15015 1829 aaPredicted RBP18.97■□□□□ 0.63
SHOX2-202ENST00000425436 FAM205AQ6ZU69 1335 aa18.96■□□□□ 0.63
SHOX2-202ENST00000425436 SHTN1A0MZ66 631 aa18.96■□□□□ 0.63
SHOX2-202ENST00000425436 PI16Q6UXB8 463 aa18.96■□□□□ 0.63
SHOX2-202ENST00000425436 CERS5Q8N5B7 392 aa18.96■□□□□ 0.63
SHOX2-202ENST00000425436 C22orf23Q9BZE7 217 aa18.96■□□□□ 0.63
SHOX2-202ENST00000425436 NMRK2Q9NPI5 230 aa18.96■□□□□ 0.63
SHOX2-202ENST00000425436 SNRKQ9NRH2 765 aa18.96■□□□□ 0.63
SHOX2-202ENST00000425436 COL1A1P02452 1464 aaPredicted RBP18.96■□□□□ 0.63
SHOX2-202ENST00000425436 POTECB2RU33 542 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 SCNN1DP51172 638 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 OTUD7AQ8TE49 926 aaPredicted RBP18.95■□□□□ 0.62
SHOX2-202ENST00000425436 HMG20BQ9P0W2 317 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 DENND2AQ9ULE3 1009 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 UQCRFS1P1P0C7P4 283 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 ARID4AP29374 1257 aaPredicted RBP18.95■□□□□ 0.62
SHOX2-202ENST00000425436 EPS15P42566 896 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 MCAMP43121 646 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 MFSD14BQ5SR56 506 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 ZNF784Q8NCA9 323 aaPredicted RBP18.95■□□□□ 0.62
SHOX2-202ENST00000425436 NDUFB9Q9Y6M9 179 aa18.95■□□□□ 0.62
SHOX2-202ENST00000425436 AOX1Q06278 1338 aa18.94■□□□□ 0.62
SHOX2-202ENST00000425436 F8W031 263 aaPredicted RBP18.94■□□□□ 0.62
SHOX2-202ENST00000425436 SEMA3EO15041 775 aa18.94■□□□□ 0.62
SHOX2-202ENST00000425436 GRIK5Q16478 980 aa18.94■□□□□ 0.62
SHOX2-202ENST00000425436 KIAA0825Q8IV33 1275 aa18.94■□□□□ 0.62
SHOX2-202ENST00000425436 SPATA5Q8NB90 893 aa18.94■□□□□ 0.62
SHOX2-202ENST00000425436 L3MBTL3Q96JM7 780 aaPredicted RBP18.94■□□□□ 0.62
SHOX2-202ENST00000425436 GMLQ99445 158 aa18.94■□□□□ 0.62
SHOX2-202ENST00000425436 GPBP1L1Q9HC44 474 aaPredicted RBP18.94■□□□□ 0.62
SHOX2-202ENST00000425436 CNOT7Q9UIV1 285 aaKnown RBP18.94■□□□□ 0.62
SHOX2-202ENST00000425436 PDE1AP54750 535 aa18.93■□□□□ 0.62
SHOX2-202ENST00000425436 MFAP1P55081 439 aaKnown RBP18.93■□□□□ 0.62
SHOX2-202ENST00000425436 TSHZ3Q63HK5 1081 aa18.93■□□□□ 0.62
SHOX2-202ENST00000425436 AGBL3Q8NEM8 1001 aa18.93■□□□□ 0.62
SHOX2-202ENST00000425436 GPRC5DQ9NZD1 345 aa18.93■□□□□ 0.62
SHOX2-202ENST00000425436 STAP2Q9UGK3 403 aa18.93■□□□□ 0.62
SHOX2-202ENST00000425436 AKAP11Q9UKA4 1901 aa18.93■□□□□ 0.62
SHOX2-202ENST00000425436 WDR90Q96KV7 1748 aa18.92■□□□□ 0.62
SHOX2-202ENST00000425436 GSPT1P15170 499 aaKnown RBP18.92■□□□□ 0.62
SHOX2-202ENST00000425436 RPS12P25398 132 aaKnown RBP18.92■□□□□ 0.62
SHOX2-202ENST00000425436 LMOD1P29536 600 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-202ENST00000425436 TBC1D9Q6ZT07 1266 aa18.92■□□□□ 0.62
SHOX2-202ENST00000425436 MICALL2Q8IY33 904 aa18.92■□□□□ 0.62
SHOX2-202ENST00000425436 WDR66Q8TBY9 1149 aa18.92■□□□□ 0.62
SHOX2-202ENST00000425436 DPF2Q92785 391 aa18.92■□□□□ 0.62
SHOX2-202ENST00000425436 USP17L8P0C7I0 530 aa18.91■□□□□ 0.62
SHOX2-202ENST00000425436 ZAP70P43403 619 aa18.91■□□□□ 0.62
SHOX2-202ENST00000425436 RBM25P49756 843 aaKnown RBP18.91■□□□□ 0.62
SHOX2-202ENST00000425436 RBM26Q5T8P6 1007 aaKnown RBP18.91■□□□□ 0.62
SHOX2-202ENST00000425436 ZNF512BQ96KM6 892 aaPredicted RBP18.91■□□□□ 0.62
SHOX2-202ENST00000425436 ABCF2Q9UG63 623 aa18.91■□□□□ 0.62
SHOX2-202ENST00000425436 HACL1Q9UJ83 578 aa18.91■□□□□ 0.62
SHOX2-202ENST00000425436 VEGFAP15692 232 aaPredicted RBP18.9■□□□□ 0.62
SHOX2-202ENST00000425436 FKBP1AP62942 108 aaKnown RBP18.9■□□□□ 0.62
SHOX2-202ENST00000425436 SAMD7Q7Z3H4 446 aa18.9■□□□□ 0.62
SHOX2-202ENST00000425436 TBC1D22AQ8WUA7 517 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms