RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
UBR4-207ENST00000425413 PGBD1Q96JS3 809 aa13.61□□□□□ -0.23
UBR4-207ENST00000425413 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
UBR4-207ENST00000425413 SCAND2PQ9GZW5 306 aaPredicted RBP13.61□□□□□ -0.23
UBR4-207ENST00000425413 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
UBR4-207ENST00000425413 ITGB4P16144 1822 aa13.61□□□□□ -0.23
UBR4-207ENST00000425413 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 FAM182BQ5T319 152 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 CCDC144CPQ8IYA2 1237 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 NR1I2O75469 434 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 PDE6AP16499 860 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 ADD2P35612 726 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 BCAMP50895 628 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 PUM3Q15397 648 aaKnown RBP13.6□□□□□ -0.23
UBR4-207ENST00000425413 CCDC24Q8N4L8 307 aa13.6□□□□□ -0.23
UBR4-207ENST00000425413 PTF1AQ7RTS3 328 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 ADCY5O95622 1261 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 MCM5P33992 734 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 ANTXR2P58335 489 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 RASGRF1Q13972 1273 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 TBC1D10CQ8IV04 446 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 TNMDQ9H2S6 317 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 CAMTA2O94983 1202 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 LETM1O95202 739 aaPredicted RBP13.59□□□□□ -0.23
UBR4-207ENST00000425413 POLR3DP05423 398 aaPredicted RBP13.59□□□□□ -0.23
UBR4-207ENST00000425413 LPIN2Q92539 896 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 AIDAQ96BJ3 306 aa13.59□□□□□ -0.23
UBR4-207ENST00000425413 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
UBR4-207ENST00000425413 B4E1Z4 1266 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 CPLX1O14810 134 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 MAP3K11Q16584 847 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 NCOA7Q8NI08 942 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 ARMT1Q9H993 441 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 TOMM22Q9NS69 142 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 FDPSP14324 419 aaKnown RBP13.58□□□□□ -0.24
UBR4-207ENST00000425413 MIGA1Q8NAN2 632 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 SPATA5Q8NB90 893 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 FBXW7Q969H0 707 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 USP28Q96RU2 1077 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
UBR4-207ENST00000425413 A0A087WWV3 80 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 MBD4O95243 580 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 SLC5A1P13866 664 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 TRDNQ13061 729 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 MB21D2Q8IYB1 491 aaPredicted RBP13.57□□□□□ -0.24
UBR4-207ENST00000425413 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 MYL10Q9BUA6 226 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 AGXT2Q9BYV1 514 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 PRKAB2O43741 272 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
UBR4-207ENST00000425413 CTDSPL2Q05D32 466 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
UBR4-207ENST00000425413 ERCC4Q92889 916 aaPredicted RBP13.57□□□□□ -0.24
UBR4-207ENST00000425413 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
UBR4-207ENST00000425413 FUCA2Q9BTY2 467 aa13.57□□□□□ -0.24
UBR4-207ENST00000425413 LRP6O75581 1613 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 CYB5R4Q7L1T6 521 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 LUZP1Q86V48 1076 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 SPC24Q8NBT2 197 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 AIFM3Q96NN9 605 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 ORC3Q9UBD5 711 aaPredicted RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 CCDC39Q9UFE4 941 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 NOL7Q9UMY1 257 aaKnown RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 ELP1O95163 1332 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 SLIT2O94813 1529 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 AP5Z1O43299 807 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 IGHMBP2P38935 993 aaKnown RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 TTF1Q15361 905 aaPredicted RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 MICU3Q86XE3 530 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 ABCF2Q9UG63 623 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 CARMIL3Q8ND23 1372 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 ADD1P35611 737 aaKnown RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 ME1P48163 572 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 TYRO3Q06418 890 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 CCDC152Q4G0S7 254 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 ZSCAN16Q9H4T2 348 aaPredicted RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 TTC12Q9H892 705 aaPredicted RBP13.56□□□□□ -0.24
UBR4-207ENST00000425413 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 KIF3AQ9Y496 699 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 MROH5Q6ZUA9 1318 aa13.56□□□□□ -0.24
UBR4-207ENST00000425413 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 FGFR2P21802 821 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 COL16A1Q07092 1604 aaPredicted RBP13.55□□□□□ -0.24
UBR4-207ENST00000425413 CFAP45Q9UL16 551 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 ZKSCAN5Q9Y2L8 839 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 SPATA31A5Q5VU36 1347 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 SPATA31A7Q8IWB4 1347 aa13.55□□□□□ -0.24
UBR4-207ENST00000425413 PDIA4P13667 645 aaKnown RBP13.55□□□□□ -0.24
UBR4-207ENST00000425413 ANO6Q4KMQ2 910 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms