RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 CAVIN2O95810 425 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 PTPN14Q15678 1187 aa16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 ZNF396Q96N95 335 aaPredicted RBP16.57■□□□□ 0.24
TPM3P9-201ENST00000424846 RNF113AO15541 343 aaKnown RBP16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 LINC00301Q8NCQ3 95 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 LRRN4CLQ8ND94 238 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 MRPS27Q92552 414 aaKnown RBP16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 NPHP1O15259 732 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 CCAR2Q8N163 923 aaKnown RBP16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 AIFM3Q96NN9 605 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 CEP57L1Q8IYX8 460 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 ZNF274Q96GC6 653 aaPredicted RBP16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 HPS5Q9UPZ3 1129 aa16.56■□□□□ 0.24
TPM3P9-201ENST00000424846 GLI3P10071 1580 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 ABCC6O95255 1503 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 CABP4P57796 275 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 KMT5BQ4FZB7 885 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 XPO4Q9C0E2 1151 aaKnown RBP16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 ARMCX5Q6P1M9 558 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
TPM3P9-201ENST00000424846 ANTXR2P58335 489 aa16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 E4F1Q66K89 784 aaPredicted RBP16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 KIAA1468Q9P260 1216 aa16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 EYA2O00167 538 aa16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 STK38Q15208 465 aa16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 ELF2Q15723 593 aa16.54■□□□□ 0.24
TPM3P9-201ENST00000424846 FGAP02671 866 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 DDX41Q9UJV9 622 aaKnown RBP16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 MROH7-TTC4A0A0A0MT08 1334 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 LMTK3Q96Q04 1460 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 SMC2O95347 1197 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 RXRAP19793 462 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 SYCP1Q15431 976 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 TMC6Q7Z403 805 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 C8orf76Q96K31 380 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 OGFRQ9NZT2 677 aa16.53■□□□□ 0.24
TPM3P9-201ENST00000424846 GOLGA8BA8MQT2 603 aa16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 PRC1O43663 620 aa16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 SF3A1Q15459 793 aaKnown RBP16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 ORC3Q9UBD5 711 aaPredicted RBP16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 ATP1A3P13637 1013 aa16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 NCAPHQ15003 741 aa16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 FBXO38Q6PIJ6 1188 aa16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 KIF18AQ8NI77 898 aa16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 FEZ1Q99689 392 aa16.52■□□□□ 0.24
TPM3P9-201ENST00000424846 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.23
TPM3P9-201ENST00000424846 FBXO18Q8NFZ0 1043 aa16.52■□□□□ 0.23
TPM3P9-201ENST00000424846 TJP1Q07157 1748 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 UBE2Q2LH0YL09 131 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 SPTLC2O15270 562 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 LMOD1P29536 600 aaPredicted RBP16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 GOLGA8FQ08AF8 430 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 GOLGA8DPQ0D2H9 430 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 AXDND1Q5T1B0 1012 aaPredicted RBP16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 C1orf167Q5SNV9 1468 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 NEMFO60524 1076 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 ZNF202O95125 648 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 ZAP70P43403 619 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 HSD3B7Q9H2F3 369 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 SENP2Q9HC62 589 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 ST7Q9NRC1 585 aa16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 CGNQ9P2M7 1197 aaKnown RBP16.51■□□□□ 0.23
TPM3P9-201ENST00000424846 EVCP57679 992 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 ATL3Q6DD88 541 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 OSBPL5Q9H0X9 879 aaPredicted RBP16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 A0A1W2PQ27 194 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 A0A1W2PQ64 194 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 A0A1W2PQD8 194 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 PFKFB1P16118 471 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 DPF2Q92785 391 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 GPR108Q9NPR9 543 aa16.5■□□□□ 0.23
TPM3P9-201ENST00000424846 SYT10Q6XYQ8 523 aa16.49■□□□□ 0.23
TPM3P9-201ENST00000424846 PPP1R13BQ96KQ4 1090 aa16.49■□□□□ 0.23
TPM3P9-201ENST00000424846 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.49■□□□□ 0.234e-7■■■□□ 17.4
TPM3P9-201ENST00000424846 ZNF330Q9Y3S2 320 aaPredicted RBP16.49■□□□□ 0.23
TPM3P9-201ENST00000424846 SLC3A2P08195 630 aaKnown RBP16.49■□□□□ 0.23
TPM3P9-201ENST00000424846 KIF23Q02241 960 aaPredicted RBP16.49■□□□□ 0.23
TPM3P9-201ENST00000424846 POLR3EQ9NVU0 708 aa16.49■□□□□ 0.23
TPM3P9-201ENST00000424846 ZNF446Q9NWS9 450 aa16.49■□□□□ 0.23
TPM3P9-201ENST00000424846 NAT10Q9H0A0 1025 aaKnown RBP16.48■□□□□ 0.23
TPM3P9-201ENST00000424846 INCENPQ9NQS7 918 aa16.48■□□□□ 0.23
TPM3P9-201ENST00000424846 COL18A1P39060 1754 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms