RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 NOB1Q9ULX3 412 aaKnown RBP8.87□□□□□ -0.99
EPHA4-206ENST00000424339 MAP3K2Q9Y2U5 619 aa8.87□□□□□ -0.99
EPHA4-206ENST00000424339 ADCY9O60503 1353 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 CARMIL3Q8ND23 1372 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 ABCC4O15439 1325 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 COL24A1Q17RW2 1714 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 TCERG1O14776 1098 aaKnown RBP8.86□□□□□ -0.99
EPHA4-206ENST00000424339 TRIM27P14373 513 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 R3HDM1Q15032 1099 aaKnown RBP8.86□□□□□ -0.99
EPHA4-206ENST00000424339 USPL1Q5W0Q7 1092 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 G2E3Q7L622 706 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 PPP1R42Q7Z4L9 355 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 AMIGO3Q86WK7 504 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 EHBP1Q8NDI1 1231 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 FRAT1Q92837 279 aaPredicted RBP8.86□□□□□ -0.99
EPHA4-206ENST00000424339 SETDB2Q96T68 719 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 NYXQ9GZU5 481 aa8.86□□□□□ -0.99
EPHA4-206ENST00000424339 POLD1P28340 1107 aa8.85□□□□□ -0.99
EPHA4-206ENST00000424339 INTS3Q68E01 1043 aaKnown RBP8.85□□□□□ -0.99
EPHA4-206ENST00000424339 DZIP1LQ8IYY4 767 aaKnown RBP8.85□□□□□ -0.99
EPHA4-206ENST00000424339 ZNF34Q8IZ26 560 aa8.85□□□□□ -0.99
EPHA4-206ENST00000424339 KCTD17Q8N5Z5 321 aa8.85□□□□□ -0.99
EPHA4-206ENST00000424339 ZFP42Q96MM3 310 aa8.85□□□□□ -0.99
EPHA4-206ENST00000424339 ISCA1Q9BUE6 129 aa8.85□□□□□ -0.99
EPHA4-206ENST00000424339 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
EPHA4-206ENST00000424339 NIP7Q9Y221 180 aaKnown RBP eCLIP8.85□□□□□ -0.99
EPHA4-206ENST00000424339 SIAH2O43255 324 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 TM4SF1P30408 202 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 RRP1P56182 461 aaKnown RBP8.84□□□□□ -0.99
EPHA4-206ENST00000424339 AAMPQ13685 434 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 HLFQ16534 295 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 RIC1Q4ADV7 1423 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 BEND3Q5T5X7 828 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 RBM26Q5T8P6 1007 aaKnown RBP8.84□□□□□ -0.99
EPHA4-206ENST00000424339 SLC4A10Q6U841 1118 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 TPTE2Q6XPS3 522 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 CWC25Q9NXE8 425 aaPredicted RBP8.84□□□□□ -0.99
EPHA4-206ENST00000424339 SRP68Q9UHB9 627 aaKnown RBP8.84□□□□□ -0.99
EPHA4-206ENST00000424339 PARP3Q9Y6F1 533 aa8.84□□□□□ -0.99
EPHA4-206ENST00000424339 AFDNP55196 1824 aaKnown RBP8.84□□□□□ -0.99
EPHA4-206ENST00000424339 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 NFIXQ14938 502 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 TBC1D9BQ66K14 1250 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 SMYD5Q6GMV2 418 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 NLRP10Q86W26 655 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 PHOX2BQ99453 314 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 MYD88Q99836 296 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 UTP14AQ9BVJ6 771 aaKnown RBP8.83□□□□□ -1
EPHA4-206ENST00000424339 SPON1Q9HCB6 807 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 NRXN2Q9P2S2 1712 aa8.83□□□□□ -1
EPHA4-206ENST00000424339 SH3TC1Q8TE82 1336 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 F6X3S4 739 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 GRM8O00222 908 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 NPHP1O15259 732 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 KDM4AO75164 1064 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 PCCAP05165 728 aaPredicted RBP8.82□□□□□ -1
EPHA4-206ENST00000424339 IGKV5-2P06315 115 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 GNAI3P08754 354 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 MMP10P09238 476 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 ST5P78524 1137 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 KCNMA1Q12791 1236 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 GCKRQ14397 625 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 NBPF5PQ86XG9 351 aaPredicted RBP8.82□□□□□ -1
EPHA4-206ENST00000424339 CNBD1Q8NA66 436 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
EPHA4-206ENST00000424339 DDX19BQ9UMR2 479 aa8.82□□□□□ -1
EPHA4-206ENST00000424339 UTYO14607 1347 aa8.81□□□□□ -1
EPHA4-206ENST00000424339 UBN2Q6ZU65 1347 aa8.81□□□□□ -1
EPHA4-206ENST00000424339 CDHR2Q9BYE9 1310 aa8.81□□□□□ -1
EPHA4-206ENST00000424339 POLRMTO00411 1230 aaKnown RBP8.81□□□□□ -1
EPHA4-206ENST00000424339 SERPINB2P05120 415 aa8.81□□□□□ -1
EPHA4-206ENST00000424339 GTF2E1P29083 439 aaPredicted RBP8.81□□□□□ -1
EPHA4-206ENST00000424339 MVPQ14764 893 aaKnown RBP8.81□□□□□ -1
EPHA4-206ENST00000424339 SMIM5Q71RC9 77 aa8.81□□□□□ -1
EPHA4-206ENST00000424339 C9orf78Q9NZ63 289 aaPredicted RBP8.81□□□□□ -1
EPHA4-206ENST00000424339 TRMT112Q9UI30 125 aaKnown RBP8.81□□□□□ -1
EPHA4-206ENST00000424339 LAMB2P55268 1798 aa8.81□□□□□ -1
EPHA4-206ENST00000424339 ATP5J2-PTCD1G3V325 749 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 NTSR2O95665 410 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 GPTP24298 496 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 SCARF1Q14162 830 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 CWF19L2Q2TBE0 894 aaKnown RBP8.8□□□□□ -1
EPHA4-206ENST00000424339 SLC10A5Q5PT55 438 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 BICDL1Q6ZP65 573 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 ITPRIPQ8IWB1 547 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 CLUAP1Q96AJ1 413 aa8.8□□□□□ -1
EPHA4-206ENST00000424339 H7C1W4 665 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 ZBTB7AO95365 584 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
EPHA4-206ENST00000424339 PDE6BP35913 854 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 DDR1Q08345 913 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 SUSD4Q5VX71 490 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 MSL1Q68DK7 614 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 TMEM151AQ8N4L1 468 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 BRIP1Q9BX63 1249 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 PLA2G12BQ9BX93 195 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 PDGFDQ9GZP0 370 aaPredicted RBP8.79□□□□□ -1
EPHA4-206ENST00000424339 MYH3P11055 1940 aa8.79□□□□□ -1
EPHA4-206ENST00000424339 KIF13BQ9NQT8 1826 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms