RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 STRIP1Q5VSL9 837 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 CHD1LQ86WJ1 897 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 TBC1D22AQ8WUA7 517 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 DENND2AQ9ULE3 1009 aa12.21□□□□□ -0.45
ECHDC3-203ENST00000422887 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.46
ECHDC3-203ENST00000422887 TTC41PQ6P2S7 1318 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 USP17L3A6NCW0 530 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 USP17L4A6NCW7 530 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 SMARCA5O60264 1052 aaPredicted RBP12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 IGSF3O75054 1194 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 PHKA1P46020 1223 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 BCAMP50895 628 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 USP17L1Q7RTZ2 530 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 GPC2Q8N158 579 aa12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 TLR7Q9NYK1 1049 aaKnown RBP12.2□□□□□ -0.46
ECHDC3-203ENST00000422887 AOX1Q06278 1338 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 ZNF541Q9H0D2 1346 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 SALL1Q9NSC2 1324 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 ERC2O15083 957 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 MMP14P50281 582 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 B4GALNT3Q6L9W6 998 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 ZGPATQ8N5A5 531 aaKnown RBP12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 WDR66Q8TBY9 1149 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 LNPKQ9C0E8 428 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 ECHDC1Q9NTX5 307 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 SUGT1Q9Y2Z0 365 aa12.19□□□□□ -0.46
ECHDC3-203ENST00000422887 PAPPA2Q9BXP8 1791 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 SALL3Q9BXA9 1300 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 ATP5JP18859 108 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 MX1P20591 662 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 CXCL9Q07325 125 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 RASGRF1Q13972 1273 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 TTLL5Q6EMB2 1281 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
ECHDC3-203ENST00000422887 GLTPD2A6NH11 291 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 PSMD14O00487 310 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 RAD17O75943 681 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 GLRX3O76003 335 aaKnown RBP12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 GTF2IP78347 998 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 DACT2Q5SW24 774 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 RSBN1LQ6PCB5 846 aaPredicted RBP12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 STAP2Q9UGK3 403 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 LAMB1P07942 1786 aa12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 DDX60LQ5H9U9 1706 aaKnown RBP12.17□□□□□ -0.46
ECHDC3-203ENST00000422887 MAST3O60307 1309 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 POTECB2RU33 542 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 MCAMP43121 646 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 TMED8Q6PL24 325 aaPredicted RBP12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 DPF2Q92785 391 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 OSBPL3Q9H4L5 887 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
ECHDC3-203ENST00000422887 IQCA1LA6NCM1 817 aa12.15□□□□□ -0.46
ECHDC3-203ENST00000422887 SPTY2D1Q68D10 685 aaPredicted RBP12.15□□□□□ -0.46
ECHDC3-203ENST00000422887 GMLQ99445 158 aa12.15□□□□□ -0.46
ECHDC3-203ENST00000422887 HAUS7Q99871 368 aa12.15□□□□□ -0.46
ECHDC3-203ENST00000422887 BCL11AQ9H165 835 aa12.15□□□□□ -0.46
ECHDC3-203ENST00000422887 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
ECHDC3-203ENST00000422887 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.46
ECHDC3-203ENST00000422887 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 PDE1AP54750 535 aa12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 SCARF1Q14162 830 aa12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 C16orf71Q8IYS4 520 aaPredicted RBP12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 OGFOD1Q8N543 542 aa12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 PI4K2BQ8TCG2 481 aa12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 KCNQ5Q9NR82 932 aa12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 HDAC9Q9UKV0 1011 aa12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 SIPA1L1O43166 1804 aa12.14□□□□□ -0.47
ECHDC3-203ENST00000422887 DDNO94850 711 aaPredicted RBP12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 LDHBP07195 334 aaKnown RBP12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 ZAP70P43403 619 aa12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 GMPSP49915 693 aaPredicted RBP12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 HDLBPQ00341 1268 aaKnown RBP12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 TICAM2Q86XR7 235 aa12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
ECHDC3-203ENST00000422887 OTOFQ9HC10 1997 aa12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 SCNN1DP51172 638 aa12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 DZIP1Q86YF9 867 aaKnown RBP12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 CERS5Q8N5B7 392 aa12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
ECHDC3-203ENST00000422887 BOLA2Q9H3K6 86 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms