RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 COL5A3P25940 1745 aaPredicted RBP16.27■□□□□ 0.2
CDCA3-202ENST00000422785 SLC5A1P13866 664 aa16.27■□□□□ 0.2
CDCA3-202ENST00000422785 EVCP57679 992 aa16.27■□□□□ 0.2
CDCA3-202ENST00000422785 HELBQ8NG08 1087 aaPredicted RBP16.27■□□□□ 0.2
CDCA3-202ENST00000422785 HMGN5P82970 282 aaKnown RBP16.26■□□□□ 0.19
CDCA3-202ENST00000422785 SCAND2PQ9GZW5 306 aaPredicted RBP16.26■□□□□ 0.19
CDCA3-202ENST00000422785 SEC31BQ9NQW1 1179 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 LAMB2P55268 1798 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 FAM184AQ8NB25 1140 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 CTDNEP1O95476 244 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 PDIA3P30101 505 aaKnown RBP16.26■□□□□ 0.19
CDCA3-202ENST00000422785 HAND2P61296 217 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 PDLIM2Q96JY6 352 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 KIF3AQ9Y496 699 aa16.26■□□□□ 0.19
CDCA3-202ENST00000422785 H3BQV1 296 aa16.25■□□□□ 0.19
CDCA3-202ENST00000422785 IDH1O75874 414 aaKnown RBP16.25■□□□□ 0.19
CDCA3-202ENST00000422785 IFFO2Q5TF58 517 aa16.25■□□□□ 0.19
CDCA3-202ENST00000422785 FAM173BQ6P4H8 233 aa16.25■□□□□ 0.19
CDCA3-202ENST00000422785 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
CDCA3-202ENST00000422785 ZSCAN16Q9H4T2 348 aaPredicted RBP16.25■□□□□ 0.19
CDCA3-202ENST00000422785 ZNF213O14771 459 aa16.25■□□□□ 0.19
CDCA3-202ENST00000422785 MCM5P33992 734 aa16.25■□□□□ 0.19
CDCA3-202ENST00000422785 RESTQ13127 1097 aa16.25■□□□□ 0.19
CDCA3-202ENST00000422785 FAM98CQ17RN3 349 aaKnown RBP16.25■□□□□ 0.19
CDCA3-202ENST00000422785 MB21D2Q8IYB1 491 aaPredicted RBP16.25■□□□□ 0.19
CDCA3-202ENST00000422785 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 PTPDC1A2A3K4 754 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 ESPNB1AK53 854 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 PDE6AP16499 860 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 IGHMBP2P38935 993 aaKnown RBP16.24■□□□□ 0.19
CDCA3-202ENST00000422785 VPS72Q15906 364 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 NAA16Q6N069 864 aaPredicted RBP16.24■□□□□ 0.19
CDCA3-202ENST00000422785 SPATA5Q8NB90 893 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 NCOA7Q8NI08 942 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 WDR19Q8NEZ3 1342 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 ZNF532Q9HCE3 1301 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 SALL1Q9NSC2 1324 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 TCRBV5S4A2TA0A5A2 114 aa16.24■□□□□ 0.19
CDCA3-202ENST00000422785 CCT2P78371 535 aaKnown RBP16.24■□□□□ 0.19
CDCA3-202ENST00000422785 MYO5AQ9Y4I1 1855 aaKnown RBP16.24■□□□□ 0.19
CDCA3-202ENST00000422785 TPRNQ4KMQ1 711 aa16.23■□□□□ 0.19
CDCA3-202ENST00000422785 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
CDCA3-202ENST00000422785 RNF214Q8ND24 703 aa16.23■□□□□ 0.19
CDCA3-202ENST00000422785 SPATA32Q96LK8 384 aa16.23■□□□□ 0.19
CDCA3-202ENST00000422785 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
CDCA3-202ENST00000422785 BCL9LQ86UU0 1499 aa16.23■□□□□ 0.19
CDCA3-202ENST00000422785 PRC1O43663 620 aa16.22■□□□□ 0.19
CDCA3-202ENST00000422785 CLCN1P35523 988 aa16.22■□□□□ 0.19
CDCA3-202ENST00000422785 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
CDCA3-202ENST00000422785 RALYLQ86SE5 291 aaKnown RBP16.22■□□□□ 0.19
CDCA3-202ENST00000422785 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
CDCA3-202ENST00000422785 NCOA5Q9HCD5 579 aaKnown RBP16.22■□□□□ 0.19
CDCA3-202ENST00000422785 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
CDCA3-202ENST00000422785 RGL2O15211 777 aa16.21■□□□□ 0.19
CDCA3-202ENST00000422785 HS1BP3Q53T59 392 aa16.21■□□□□ 0.19
CDCA3-202ENST00000422785 NGLY1Q96IV0 654 aa16.21■□□□□ 0.19
CDCA3-202ENST00000422785 TFIP11Q9UBB9 837 aaKnown RBP16.21■□□□□ 0.19
CDCA3-202ENST00000422785 DOCK2Q92608 1830 aa16.21■□□□□ 0.19
CDCA3-202ENST00000422785 ANTXR2P58335 489 aa16.21■□□□□ 0.19
CDCA3-202ENST00000422785 MAP3K12Q12852 859 aa16.21■□□□□ 0.19
CDCA3-202ENST00000422785 STRBPQ96SI9 672 aaKnown RBP16.21■□□□□ 0.19
CDCA3-202ENST00000422785 SNAP23O00161 211 aa16.21■□□□□ 0.18
CDCA3-202ENST00000422785 UVSSAQ2YD98 709 aa16.21■□□□□ 0.18
CDCA3-202ENST00000422785 AIDAQ96BJ3 306 aa16.21■□□□□ 0.18
CDCA3-202ENST00000422785 C8orf37Q96NL8 207 aa16.21■□□□□ 0.18
CDCA3-202ENST00000422785 NBPF3Q9H094 633 aa16.21■□□□□ 0.18
CDCA3-202ENST00000422785 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.18
CDCA3-202ENST00000422785 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
CDCA3-202ENST00000422785 ALX1Q15699 326 aa16.2■□□□□ 0.18
CDCA3-202ENST00000422785 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
CDCA3-202ENST00000422785 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
CDCA3-202ENST00000422785 DHX16O60231 1041 aaKnown RBP16.2■□□□□ 0.18
CDCA3-202ENST00000422785 APPP05067 770 aa16.2■□□□□ 0.18
CDCA3-202ENST00000422785 CHRNDQ07001 517 aa16.2■□□□□ 0.18
CDCA3-202ENST00000422785 TRDNQ13061 729 aa16.2■□□□□ 0.18
CDCA3-202ENST00000422785 FUCA2Q9BTY2 467 aa16.2■□□□□ 0.18
CDCA3-202ENST00000422785 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
CDCA3-202ENST00000422785 GOLGA6L4A6NEF3 574 aa16.19■□□□□ 0.18
CDCA3-202ENST00000422785 BCAMP50895 628 aa16.19■□□□□ 0.18
CDCA3-202ENST00000422785 GIMAP6Q6P9H5 292 aa16.19■□□□□ 0.18
CDCA3-202ENST00000422785 MAGEB6Q8N7X4 407 aa16.19■□□□□ 0.18
CDCA3-202ENST00000422785 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
CDCA3-202ENST00000422785 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
CDCA3-202ENST00000422785 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
CDCA3-202ENST00000422785 ERFEQ4G0M1 354 aa16.18■□□□□ 0.18
CDCA3-202ENST00000422785 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
CDCA3-202ENST00000422785 FNBP4Q8N3X1 1017 aaPredicted RBP16.18■□□□□ 0.18
CDCA3-202ENST00000422785 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
CDCA3-202ENST00000422785 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
CDCA3-202ENST00000422785 FDPSP14324 419 aaKnown RBP16.18■□□□□ 0.18
CDCA3-202ENST00000422785 LIG1P18858 919 aa16.18■□□□□ 0.18
CDCA3-202ENST00000422785 ATL3Q6DD88 541 aa16.18■□□□□ 0.18
CDCA3-202ENST00000422785 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
CDCA3-202ENST00000422785 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
CDCA3-202ENST00000422785 ZSCAN30Q86W11 494 aa16.17■□□□□ 0.18
CDCA3-202ENST00000422785 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms