RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 TRIM21P19474 475 aaKnown RBP12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 RRAGBQ5VZM2 374 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 ZSCAN16Q9H4T2 348 aaPredicted RBP12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 FAM170AA1A519 330 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 SPTLC2O15270 562 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 UIMC1Q96RL1 719 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 MAPK8IP1Q9UQF2 711 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 MSH6P52701 1360 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
SEMA4D-208ENST00000422704 PRDM1O75626 825 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 YEATS4O95619 227 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 ANAPC15P60006 121 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 CCDC40Q4G0X9 1142 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 PAFAH1B1P43034 410 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 HSPA2P54652 639 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 ZCRB1Q8TBF4 217 aaKnown RBP12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 GSDMDP57764 484 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 ARHGAP23Q9P227 1491 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 ATP2C2O75185 946 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 KAT14Q9H8E8 782 aa12.16□□□□□ -0.46
SEMA4D-208ENST00000422704 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 NPHP3Q7Z494 1330 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 RTN1Q16799 776 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 DDX17Q92841 729 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 MYL10Q9BUA6 226 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 CD163L1Q9NR16 1453 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 KIF20BQ96Q89 1820 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 ADGRB2O60241 1585 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 GSTTP1A0A1W2PQM5 241 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 DYNC1I1O14576 645 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 METP08581 1390 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 SYT10Q6XYQ8 523 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 DYDC1Q8WWB3 177 aa12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
SEMA4D-208ENST00000422704 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 A1BGP04217 495 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 PICALMQ13492 652 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 HEATR3Q7Z4Q2 680 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 PUF60Q9UHX1 559 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 JAK2O60674 1132 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 RNF187Q5TA31 235 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 RPGRQ92834 1020 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 IL15P40933 162 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 TMOD2Q9NZR1 351 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 KCNQ3O43525 872 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 ALDH1L1O75891 902 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 IFFO1Q0D2I5 559 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 STAMQ92783 540 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 TMEM63CQ9P1W3 806 aa12.14□□□□□ -0.47
SEMA4D-208ENST00000422704 CCDC171Q6TFL3 1326 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 ZNF521Q96K83 1311 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 U2AF2P26368 475 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 RUFY3Q7L099 469 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 PALD1Q9ULE6 856 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 SAMM50Q9Y512 469 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 B4E1Z4 1266 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 MAGEB6Q8N7X4 407 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 ZNF287Q9HBT7 754 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 CAPZA3Q96KX2 299 aa12.13□□□□□ -0.47
SEMA4D-208ENST00000422704 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 PDE4BQ07343 736 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 TTF1Q15361 905 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 IL13P35225 146 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 TERF1P54274 439 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 TMEM266Q2M3C6 531 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 IQCEQ6IPM2 695 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 SNX14Q9Y5W7 946 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 USP19O94966 1318 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 NEMFO60524 1076 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 NAA16Q6N069 864 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 PRIMPOLQ96LW4 560 aa12.12□□□□□ -0.47
SEMA4D-208ENST00000422704 RHOXF2BP0C7M4 288 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 ESR2Q92731 530 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 RHOXF2Q9BQY4 288 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 RAB34Q9BZG1 259 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 CDC42BPGQ6DT37 1551 aa12.11□□□□□ -0.47
SEMA4D-208ENST00000422704 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms