RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 EAF2Q96CJ1 260 aaPredicted RBP11.42□□□□□ -0.58
PDGFC-202ENST00000422544 CCDC8Q9H0W5 538 aaPredicted RBP11.42□□□□□ -0.58
PDGFC-202ENST00000422544 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
PDGFC-202ENST00000422544 GPR108Q9NPR9 543 aa11.42□□□□□ -0.58
PDGFC-202ENST00000422544 IQSEC3Q9UPP2 1182 aaPredicted RBP11.42□□□□□ -0.58
PDGFC-202ENST00000422544 USP17L3A6NCW0 530 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 USP17L4A6NCW7 530 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 NEFLP07196 543 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 PHKA1P46020 1223 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 GTF2IP78347 998 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 TNIP1Q15025 636 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 GORABQ5T7V8 394 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 CCDC102BQ68D86 513 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 TTLL5Q6EMB2 1281 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 USP17L1Q7RTZ2 530 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 AACSQ86V21 672 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 GPC2Q8N158 579 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 SMC1BQ8NDV3 1235 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 TDRD7Q8NHU6 1098 aaKnown RBP11.41□□□□□ -0.58
PDGFC-202ENST00000422544 DBNDD2Q9BQY9 259 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 LRRCC1Q9C099 1032 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 JAG2Q9Y219 1238 aa11.41□□□□□ -0.58
PDGFC-202ENST00000422544 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
PDGFC-202ENST00000422544 KDM2BQ8NHM5 1336 aa11.4□□□□□ -0.58
PDGFC-202ENST00000422544 FOXN1O15353 648 aa11.4□□□□□ -0.58
PDGFC-202ENST00000422544 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
PDGFC-202ENST00000422544 VIL1P09327 827 aaKnown RBP11.4□□□□□ -0.58
PDGFC-202ENST00000422544 CLASRPQ8N2M8 674 aaKnown RBP11.4□□□□□ -0.58
PDGFC-202ENST00000422544 MXD3Q9BW11 206 aa11.4□□□□□ -0.58
PDGFC-202ENST00000422544 TLR7Q9NYK1 1049 aaKnown RBP11.4□□□□□ -0.58
PDGFC-202ENST00000422544 DBNLQ9UJU6 430 aaKnown RBP11.4□□□□□ -0.58
PDGFC-202ENST00000422544 ZNF609O15014 1411 aa11.39□□□□□ -0.59
PDGFC-202ENST00000422544 IFIT2P09913 472 aaKnown RBP11.39□□□□□ -0.59
PDGFC-202ENST00000422544 GMPSP49915 693 aaPredicted RBP11.39□□□□□ -0.59
PDGFC-202ENST00000422544 CHAF1AQ13111 956 aaPredicted RBP11.39□□□□□ -0.59
PDGFC-202ENST00000422544 DACT2Q5SW24 774 aa11.39□□□□□ -0.59
PDGFC-202ENST00000422544 ANKRD45Q5TZF3 282 aa11.39□□□□□ -0.59
PDGFC-202ENST00000422544 STRIP1Q5VSL9 837 aa11.39□□□□□ -0.59
PDGFC-202ENST00000422544 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
PDGFC-202ENST00000422544 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
PDGFC-202ENST00000422544 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
PDGFC-202ENST00000422544 CCDC158Q5M9N0 1113 aa11.38□□□□□ -0.59
PDGFC-202ENST00000422544 B4GALNT3Q6L9W6 998 aa11.38□□□□□ -0.59
PDGFC-202ENST00000422544 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
PDGFC-202ENST00000422544 FAM205AQ6ZU69 1335 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 SCN4AP35499 1836 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 PDE4DIPQ5VU43 2346 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 SHTN1A0MZ66 631 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 SCNN1DP51172 638 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 RASGRF1Q13972 1273 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 TTC39AQ5SRH9 613 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 SMC5Q8IY18 1101 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 CERS5Q8N5B7 392 aa11.37□□□□□ -0.59
PDGFC-202ENST00000422544 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
PDGFC-202ENST00000422544 CNOT7Q9UIV1 285 aaKnown RBP11.37□□□□□ -0.59
PDGFC-202ENST00000422544 SEMA3EO15041 775 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 UQCRFS1P1P0C7P4 283 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
PDGFC-202ENST00000422544 RPS12P25398 132 aaKnown RBP11.36□□□□□ -0.59
PDGFC-202ENST00000422544 EPS15P42566 896 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 SCARF1Q14162 830 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 MFSD14BQ5SR56 506 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 AGBL3Q8NEM8 1001 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 DPF2Q92785 391 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 GMLQ99445 158 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 GPRC5DQ9NZD1 345 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 HMG20BQ9P0W2 317 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
PDGFC-202ENST00000422544 DENND2AQ9ULE3 1009 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 A0A1B0GUL6 1792 aa11.36□□□□□ -0.59
PDGFC-202ENST00000422544 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 F8W031 263 aaPredicted RBP11.35□□□□□ -0.59
PDGFC-202ENST00000422544 USP17L8P0C7I0 530 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 ARID4AP29374 1257 aaPredicted RBP11.35□□□□□ -0.59
PDGFC-202ENST00000422544 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
PDGFC-202ENST00000422544 MCAMP43121 646 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 FKBP1AP62942 108 aaKnown RBP11.35□□□□□ -0.59
PDGFC-202ENST00000422544 GRIK5Q16478 980 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 PI16Q6UXB8 463 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 SPATA5Q8NB90 893 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 WDR66Q8TBY9 1149 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 OTUD7AQ8TE49 926 aaPredicted RBP11.35□□□□□ -0.59
PDGFC-202ENST00000422544 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
PDGFC-202ENST00000422544 SNRKQ9NRH2 765 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 HACL1Q9UJ83 578 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
PDGFC-202ENST00000422544 SCN9AQ15858 1988 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 H7C1D1 291 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 EPHX2P34913 555 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 NUCB1Q02818 461 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
PDGFC-202ENST00000422544 SAMD7Q7Z3H4 446 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 LNPKQ9C0E8 428 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 TAF1DQ9H5J8 278 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms