RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 ZNF384Q8TF68 577 aa10.87□□□□□ -0.67
HPS4-204ENST00000422379 SEC62Q99442 399 aaKnown RBP10.87□□□□□ -0.67
HPS4-204ENST00000422379 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
HPS4-204ENST00000422379 MED23Q9ULK4 1368 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 UQCRFS1P1P0C7P4 283 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 GRIK5Q16478 980 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 ESYT1Q9BSJ8 1104 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 FSD1Q9BTV5 496 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 AK9Q5TCS8 1911 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 MFAP1P55081 439 aaKnown RBP10.86□□□□□ -0.67
HPS4-204ENST00000422379 NMIQ13287 307 aaPredicted RBP10.86□□□□□ -0.67
HPS4-204ENST00000422379 CAVIN4Q5BKX8 364 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 CWC27Q6UX04 472 aaKnown RBP10.86□□□□□ -0.67
HPS4-204ENST00000422379 TDRD7Q8NHU6 1098 aaKnown RBP10.86□□□□□ -0.67
HPS4-204ENST00000422379 RTFDC1Q9BY42 306 aaPredicted RBP10.86□□□□□ -0.67
HPS4-204ENST00000422379 FHDC1Q9C0D6 1143 aaPredicted RBP10.86□□□□□ -0.67
HPS4-204ENST00000422379 CD209Q9NNX6 404 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 KCNQ5Q9NR82 932 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 PIM2Q9P1W9 311 aa10.86□□□□□ -0.67
HPS4-204ENST00000422379 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
HPS4-204ENST00000422379 WASHC4Q2M389 1173 aa10.85□□□□□ -0.67
HPS4-204ENST00000422379 ZNF589Q86UQ0 364 aaPredicted RBP10.85□□□□□ -0.67
HPS4-204ENST00000422379 CHD4Q14839 1912 aa10.85□□□□□ -0.67
HPS4-204ENST00000422379 SGSM2O43147 1006 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 IL1R1P14778 569 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 PRELPP51888 382 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 CCDC129Q6ZRS4 1044 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 VPS37DQ86XT2 251 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 TCRBV5S4A2TA0A5A2 114 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 CHAF1AQ13111 956 aaPredicted RBP10.84□□□□□ -0.67
HPS4-204ENST00000422379 AOC3Q16853 763 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 DALRD3Q5D0E6 543 aaKnown RBP10.84□□□□□ -0.67
HPS4-204ENST00000422379 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
HPS4-204ENST00000422379 DOCK2Q92608 1830 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 NFKBIEO00221 500 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 IDH1O75874 414 aaKnown RBP10.83□□□□□ -0.68
HPS4-204ENST00000422379 CCDC93Q567U6 631 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 ADGRA1Q86SQ6 560 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 MXD3Q9BW11 206 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 C22orf23Q9BZE7 217 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 DBNDD1Q9H9R9 158 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 ZNF277Q9NRM2 450 aaPredicted RBP10.83□□□□□ -0.68
HPS4-204ENST00000422379 RFX7Q2KHR2 1363 aa10.83□□□□□ -0.68
HPS4-204ENST00000422379 M0R2C6 588 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 FOXP2O15409 715 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 RNF113AO15541 343 aaKnown RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 PDE6AP16499 860 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 PRDX5P30044 214 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 ADD2P35612 726 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 ZMYM1Q5SVZ6 1142 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 ZNF804AQ7Z570 1209 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 PUS7LQ9H0K6 701 aaKnown RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 DIAPH3Q9NSV4 1193 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 GNL3LQ9NVN8 582 aaKnown RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 DENND2AQ9ULE3 1009 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 BCS1LQ9Y276 419 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 SCN9AQ15858 1988 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 MAST3O60307 1309 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 PDS5AQ29RF7 1337 aaKnown RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 ZNF646O15015 1829 aaPredicted RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 YDJCA8MPS7 323 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 SEMA3EO15041 775 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 PTH1RQ03431 593 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 KIAA2012Q0VF49 1180 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 SLC9C2Q5TAH2 1124 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 VPS53Q5VIR6 699 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 CERS5Q8N5B7 392 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 SYT17Q9BSW7 474 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 USP26Q9BXU7 913 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 ZC3H12CQ9C0D7 883 aaKnown RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 LSG1Q9H089 658 aaKnown RBP10.82□□□□□ -0.68
HPS4-204ENST00000422379 ABCF2Q9UG63 623 aa10.82□□□□□ -0.68
HPS4-204ENST00000422379 CC2D2BQ6DHV5 1058 aa10.81□□□□□ -0.68
HPS4-204ENST00000422379 PSMD1Q99460 953 aa10.81□□□□□ -0.68
HPS4-204ENST00000422379 COA1Q9GZY4 146 aa10.81□□□□□ -0.68
HPS4-204ENST00000422379 ZNF532Q9HCE3 1301 aa10.81□□□□□ -0.68
HPS4-204ENST00000422379 FER1L6Q2WGJ9 1857 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 FRAT2O75474 233 aaPredicted RBP10.8□□□□□ -0.68
HPS4-204ENST00000422379 RASSF7Q02833 373 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 RTKN2Q8IZC4 609 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 MAGEB6Q8N7X4 407 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 KIF2CQ99661 725 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 MYH13Q9UKX3 1938 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 FAM205AQ6ZU69 1335 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 GTF2IP78347 998 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 MECOMQ03112 1051 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 TTF1Q15361 905 aaPredicted RBP10.8□□□□□ -0.68
HPS4-204ENST00000422379 NSUN4Q96CB9 384 aaKnown RBP10.8□□□□□ -0.68
HPS4-204ENST00000422379 TMX4Q9H1E5 349 aaPredicted RBP10.8□□□□□ -0.68
HPS4-204ENST00000422379 ANO2Q9NQ90 1003 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 PALD1Q9ULE6 856 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 TAF6LQ9Y6J9 622 aa10.8□□□□□ -0.68
HPS4-204ENST00000422379 SALL1Q9NSC2 1324 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 PPIP5K2O43314 1243 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 ECE2O60344 883 aa10.79□□□□□ -0.68
HPS4-204ENST00000422379 YBX3P16989 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
HPS4-204ENST00000422379 RBM25P49756 843 aaKnown RBP10.79□□□□□ -0.68
HPS4-204ENST00000422379 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms