RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 NFAT5O94916 1531 aa24.69■■□□□ 1.54
USP48-205ENST00000421625 KCNJ6P48051 423 aa24.69■■□□□ 1.54
USP48-205ENST00000421625 ETF1P62495 437 aaKnown RBP24.69■■□□□ 1.54
USP48-205ENST00000421625 XAGE3Q8WTP9 111 aa24.69■■□□□ 1.54
USP48-205ENST00000421625 SH3TC1Q8TE82 1336 aa24.69■■□□□ 1.54
USP48-205ENST00000421625 ATP1A3P13637 1013 aa24.68■■□□□ 1.54
USP48-205ENST00000421625 KBTBD3Q8NAB2 608 aa24.68■■□□□ 1.54
USP48-205ENST00000421625 GPHNQ9NQX3 736 aaPredicted RBP24.68■■□□□ 1.54
USP48-205ENST00000421625 CALCOCO1Q9P1Z2 691 aa24.68■■□□□ 1.54
USP48-205ENST00000421625 ORC3Q9UBD5 711 aaPredicted RBP24.68■■□□□ 1.54
USP48-205ENST00000421625 VGLL3A8MV65 326 aa24.68■■□□□ 1.54
USP48-205ENST00000421625 SLC3A2P08195 630 aaKnown RBP24.68■■□□□ 1.54
USP48-205ENST00000421625 AMOTQ4VCS5 1084 aa24.68■■□□□ 1.54
USP48-205ENST00000421625 ZRANB2O95218 330 aaKnown RBP eCLIP24.67■■□□□ 1.54
USP48-205ENST00000421625 NLRP12P59046 1061 aa24.67■■□□□ 1.54
USP48-205ENST00000421625 FAM193AP78312 1265 aa24.67■■□□□ 1.54
USP48-205ENST00000421625 FANCCQ00597 558 aa24.67■■□□□ 1.54
USP48-205ENST00000421625 SLC39A6Q13433 755 aa24.67■■□□□ 1.54
USP48-205ENST00000421625 GOLIM4O00461 696 aa24.67■■□□□ 1.54
USP48-205ENST00000421625 COPS6Q7L5N1 327 aa24.67■■□□□ 1.54
USP48-205ENST00000421625 UBXN4Q92575 508 aa24.67■■□□□ 1.54
USP48-205ENST00000421625 TRIM65Q6PJ69 517 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 GJB4Q9NTQ9 266 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 NRDCO43847 1150 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 SEC31AO94979 1220 aaKnown RBP24.66■■□□□ 1.54
USP48-205ENST00000421625 ZNF202O95125 648 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 GOLGA8FQ08AF8 430 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 GOLGA8DPQ0D2H9 430 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 PTPN21Q16825 1174 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 ZNF274Q96GC6 653 aaPredicted RBP24.66■■□□□ 1.54
USP48-205ENST00000421625 HSD3B7Q9H2F3 369 aa24.66■■□□□ 1.54
USP48-205ENST00000421625 TPM4P67936 248 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 TMCO3Q6UWJ1 677 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 CREBRFQ8IUR6 639 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 DPF2Q92785 391 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 METTL22Q9BUU2 404 aaPredicted RBP24.65■■□□□ 1.54
USP48-205ENST00000421625 PHLPP2Q6ZVD8 1323 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 SPTLC2O15270 562 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 POLR3GO15318 223 aaPredicted RBP24.65■■□□□ 1.54
USP48-205ENST00000421625 PIP4K2AP48426 406 aaPredicted RBP24.65■■□□□ 1.54
USP48-205ENST00000421625 UBE3BQ7Z3V4 1068 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 DSCC1Q9BVC3 393 aa24.65■■□□□ 1.54
USP48-205ENST00000421625 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.65■■□□□ 1.54
USP48-205ENST00000421625 URI1O94763 535 aaPredicted RBP24.64■■□□□ 1.54
USP48-205ENST00000421625 HNRNPH2P55795 449 aaKnown RBP24.64■■□□□ 1.54
USP48-205ENST00000421625 DDX17Q92841 729 aaKnown RBP24.64■■□□□ 1.54
USP48-205ENST00000421625 TRERF1Q96PN7 1200 aa24.64■■□□□ 1.54
USP48-205ENST00000421625 HSPD1P10809 573 aaKnown RBP24.64■■□□□ 1.53
USP48-205ENST00000421625 TTLL5Q6EMB2 1281 aa24.64■■□□□ 1.53
USP48-205ENST00000421625 MNS1Q8NEH6 495 aa24.64■■□□□ 1.53
USP48-205ENST00000421625 KCNG4Q8TDN1 519 aa24.64■■□□□ 1.53
USP48-205ENST00000421625 CARD6Q9BX69 1037 aa24.64■■□□□ 1.53
USP48-205ENST00000421625 EPC1Q9H2F5 836 aa24.64■■□□□ 1.53
USP48-205ENST00000421625 TADA3O75528 432 aa24.63■■□□□ 1.53
USP48-205ENST00000421625 TUBB4AP04350 444 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 MAPK8IP2Q13387 824 aaPredicted RBP24.62■■□□□ 1.53
USP48-205ENST00000421625 C8orf76Q96K31 380 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 ARGLU1Q9NWB6 273 aaPredicted RBP24.62■■□□□ 1.53
USP48-205ENST00000421625 MROH7-TTC4A0A0A0MT08 1334 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 PFKFB1P16118 471 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 RAB11FIP4Q86YS3 637 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 UTP14AQ9BVJ6 771 aaKnown RBP24.62■■□□□ 1.53
USP48-205ENST00000421625 HELLSQ9NRZ9 838 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 POLR3EQ9NVU0 708 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 PAG1Q9NWQ8 432 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 YEATS4O95619 227 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 CAPN2P17655 700 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 MYSM1Q5VVJ2 828 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 REXO1L1PQ8IX06 675 aa24.62■■□□□ 1.53
USP48-205ENST00000421625 PALLDQ8WX93 1383 aa24.61■■□□□ 1.53
USP48-205ENST00000421625 KIF28PB7ZC32 967 aa24.61■■□□□ 1.53
USP48-205ENST00000421625 NEUROD6Q96NK8 337 aa24.61■■□□□ 1.53
USP48-205ENST00000421625 OVOS2A0A0G2JMS6 1433 aa24.61■■□□□ 1.53
USP48-205ENST00000421625 CDK11BP21127 795 aaKnown RBP24.61■■□□□ 1.53
USP48-205ENST00000421625 PARP3Q9Y6F1 533 aa24.61■■□□□ 1.53
USP48-205ENST00000421625 ZMYM1Q5SVZ6 1142 aa24.6■■□□□ 1.53
USP48-205ENST00000421625 AXDND1Q5T1B0 1012 aaPredicted RBP24.6■■□□□ 1.53
USP48-205ENST00000421625 FAM177A1Q8N128 213 aaPredicted RBP24.6■■□□□ 1.53
USP48-205ENST00000421625 NEK11Q8NG66 645 aa24.6■■□□□ 1.53
USP48-205ENST00000421625 MAST3O60307 1309 aa24.6■■□□□ 1.53
USP48-205ENST00000421625 TULP2O00295 520 aa24.6■■□□□ 1.53
USP48-205ENST00000421625 UBASH3AP57075 661 aa24.6■■□□□ 1.53
USP48-205ENST00000421625 SIPA1L3O60292 1781 aaPredicted RBP24.6■■□□□ 1.53
USP48-205ENST00000421625 ATP5J2-PTCD1G3V325 749 aa24.59■■□□□ 1.53
USP48-205ENST00000421625 PTCD1O75127 700 aaKnown RBP24.59■■□□□ 1.53
USP48-205ENST00000421625 RABL6Q3YEC7 729 aaPredicted RBP24.59■■□□□ 1.53
USP48-205ENST00000421625 C5P01031 1676 aa24.59■■□□□ 1.53
USP48-205ENST00000421625 TMEM232C9JQI7 657 aa24.59■■□□□ 1.53
USP48-205ENST00000421625 IKBKBO14920 756 aa24.59■■□□□ 1.53
USP48-205ENST00000421625 CCP110O43303 1012 aa24.59■■□□□ 1.53
USP48-205ENST00000421625 MARCKSP29966 332 aaPredicted RBP24.59■■□□□ 1.53
USP48-205ENST00000421625 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
USP48-205ENST00000421625 TMX1Q9H3N1 280 aa24.59■■□□□ 1.53
USP48-205ENST00000421625 WDHD1O75717 1129 aaPredicted RBP24.58■■□□□ 1.53
USP48-205ENST00000421625 SASH3O75995 380 aa24.58■■□□□ 1.53
USP48-205ENST00000421625 SERPINC1P01008 464 aa24.58■■□□□ 1.53
USP48-205ENST00000421625 DHX8Q14562 1220 aaKnown RBP24.58■■□□□ 1.53
USP48-205ENST00000421625 ZNF790Q6PG37 636 aa24.58■■□□□ 1.53
USP48-205ENST00000421625 ANKRD13DQ6ZTN6 518 aa24.58■■□□□ 1.53
USP48-205ENST00000421625 FBXO18Q8NFZ0 1043 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms