RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 WNT10BO00744 389 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 RLBP1P12271 317 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 ATP8B2P98198 1209 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 POLA2Q14181 598 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 CST9Q5W186 159 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 SULF1Q8IWU6 871 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 CERS5Q8N5B7 392 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
FAM3A-209ENST00000421517 SEMA3EO15041 775 aa18.36■□□□□ 0.53
FAM3A-209ENST00000421517 HDLBPQ00341 1268 aaKnown RBP18.36■□□□□ 0.53
FAM3A-209ENST00000421517 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
FAM3A-209ENST00000421517 ITPRIPQ8IWB1 547 aa18.36■□□□□ 0.53
FAM3A-209ENST00000421517 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
FAM3A-209ENST00000421517 GLIS2Q9BZE0 524 aaPredicted RBP18.36■□□□□ 0.53
FAM3A-209ENST00000421517 SERPINA10Q9UK55 444 aa18.36■□□□□ 0.53
FAM3A-209ENST00000421517 TLL2Q9Y6L7 1015 aa18.36■□□□□ 0.53
FAM3A-209ENST00000421517 HTRA3P83110 453 aa18.35■□□□□ 0.53
FAM3A-209ENST00000421517 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
FAM3A-209ENST00000421517 RBM26Q5T8P6 1007 aaKnown RBP18.35■□□□□ 0.53
FAM3A-209ENST00000421517 KIAA0825Q8IV33 1275 aa18.35■□□□□ 0.53
FAM3A-209ENST00000421517 FBXW7Q969H0 707 aa18.35■□□□□ 0.53
FAM3A-209ENST00000421517 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
FAM3A-209ENST00000421517 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
FAM3A-209ENST00000421517 TRPM7Q96QT4 1865 aa18.35■□□□□ 0.53
FAM3A-209ENST00000421517 COL1A1P02452 1464 aaPredicted RBP18.34■□□□□ 0.53
FAM3A-209ENST00000421517 PDS5AQ29RF7 1337 aaKnown RBP18.34■□□□□ 0.53
FAM3A-209ENST00000421517 FKBP1BP68106 108 aa18.34■□□□□ 0.53
FAM3A-209ENST00000421517 DEFB115Q30KQ5 88 aa18.34■□□□□ 0.53
FAM3A-209ENST00000421517 MFSD14BQ5SR56 506 aa18.34■□□□□ 0.53
FAM3A-209ENST00000421517 ANGEL2Q5VTE6 544 aaKnown RBP18.34■□□□□ 0.53
FAM3A-209ENST00000421517 USP48Q86UV5 1035 aa18.34■□□□□ 0.53
FAM3A-209ENST00000421517 MXD3Q9BW11 206 aa18.34■□□□□ 0.53
FAM3A-209ENST00000421517 SIL1Q9H173 461 aa18.34■□□□□ 0.53
FAM3A-209ENST00000421517 GPR108Q9NPR9 543 aa18.34■□□□□ 0.53
FAM3A-209ENST00000421517 GNL3LQ9NVN8 582 aaKnown RBP18.34■□□□□ 0.53
FAM3A-209ENST00000421517 PA2G4Q9UQ80 394 aaKnown RBP18.34■□□□□ 0.53
FAM3A-209ENST00000421517 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
FAM3A-209ENST00000421517 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
FAM3A-209ENST00000421517 TRAF5O00463 557 aa18.33■□□□□ 0.52
FAM3A-209ENST00000421517 CELF2O95319 508 aaKnown RBP18.33■□□□□ 0.52
FAM3A-209ENST00000421517 BCAMP50895 628 aa18.33■□□□□ 0.52
FAM3A-209ENST00000421517 MVPQ14764 893 aaKnown RBP18.33■□□□□ 0.52
FAM3A-209ENST00000421517 SAPCD2Q86UD0 394 aa18.33■□□□□ 0.52
FAM3A-209ENST00000421517 APOBEC3FQ8IUX4 373 aaKnown RBP18.33■□□□□ 0.52
FAM3A-209ENST00000421517 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.52
FAM3A-209ENST00000421517 ARAP2Q8WZ64 1704 aa18.32■□□□□ 0.52
FAM3A-209ENST00000421517 SALL1Q9NSC2 1324 aa18.32■□□□□ 0.52
FAM3A-209ENST00000421517 MYO1BO43795 1136 aa18.32■□□□□ 0.52
FAM3A-209ENST00000421517 G3BP1Q13283 466 aaKnown RBP eCLIP18.32■□□□□ 0.52
FAM3A-209ENST00000421517 DLGAP5Q15398 846 aa18.32■□□□□ 0.52
FAM3A-209ENST00000421517 NBPF9Q3BBW0 867 aa18.32■□□□□ 0.52
FAM3A-209ENST00000421517 PPP2R3BQ9Y5P8 575 aa18.32■□□□□ 0.52
FAM3A-209ENST00000421517 MAST3O60307 1309 aa18.31■□□□□ 0.52
FAM3A-209ENST00000421517 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
FAM3A-209ENST00000421517 FRAT2O75474 233 aaPredicted RBP18.31■□□□□ 0.52
FAM3A-209ENST00000421517 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
FAM3A-209ENST00000421517 ECE1P42892 770 aa18.31■□□□□ 0.52
FAM3A-209ENST00000421517 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
FAM3A-209ENST00000421517 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
FAM3A-209ENST00000421517 IGSF3O75054 1194 aa18.3■□□□□ 0.52
FAM3A-209ENST00000421517 C2orf69Q8N8R5 385 aa18.3■□□□□ 0.52
FAM3A-209ENST00000421517 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
FAM3A-209ENST00000421517 ABT1Q9ULW3 272 aaKnown RBP18.3■□□□□ 0.52
FAM3A-209ENST00000421517 A0A1B0GUL7 405 aa18.29■□□□□ 0.52
FAM3A-209ENST00000421517 TFCP2Q12800 502 aa18.29■□□□□ 0.52
FAM3A-209ENST00000421517 CFAP100Q494V2 611 aa18.29■□□□□ 0.52
FAM3A-209ENST00000421517 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
FAM3A-209ENST00000421517 ZGPATQ8N5A5 531 aaKnown RBP18.29■□□□□ 0.52
FAM3A-209ENST00000421517 ZBTB40Q9NUA8 1239 aa18.29■□□□□ 0.52
FAM3A-209ENST00000421517 TTF2Q9UNY4 1162 aaKnown RBP18.29■□□□□ 0.52
FAM3A-209ENST00000421517 ADM5C9JUS6 153 aa18.28■□□□□ 0.52
FAM3A-209ENST00000421517 MAP2K2P36507 400 aa18.28■□□□□ 0.52
FAM3A-209ENST00000421517 FMR1Q06787 632 aaKnown RBP eCLIP18.28■□□□□ 0.52
FAM3A-209ENST00000421517 CCDC102BQ68D86 513 aa18.28■□□□□ 0.52
FAM3A-209ENST00000421517 HHIPL2Q6UWX4 724 aa18.28■□□□□ 0.52
FAM3A-209ENST00000421517 CDCA5Q96FF9 252 aa18.28■□□□□ 0.52
FAM3A-209ENST00000421517 GBA2Q9HCG7 927 aaPredicted RBP18.28■□□□□ 0.52
FAM3A-209ENST00000421517 MKRN1Q9UHC7 482 aaKnown RBP18.28■□□□□ 0.52
FAM3A-209ENST00000421517 ASTN2O75129 1339 aaPredicted RBP18.27■□□□□ 0.52
FAM3A-209ENST00000421517 UNCXA6NJT0 531 aa18.27■□□□□ 0.52
FAM3A-209ENST00000421517 VEGFBP49765 207 aa18.27■□□□□ 0.52
FAM3A-209ENST00000421517 TNFAIP1Q13829 316 aa18.27■□□□□ 0.52
FAM3A-209ENST00000421517 HSP90AB4PQ58FF6 505 aa18.27■□□□□ 0.52
FAM3A-209ENST00000421517 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
FAM3A-209ENST00000421517 NF2P35240 595 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 TIMM10P62072 90 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 ERC1Q8IUD2 1116 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 XAGE2Q96GT9 111 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 ZNF512BQ96KM6 892 aaPredicted RBP18.26■□□□□ 0.51
FAM3A-209ENST00000421517 PRMT6Q96LA8 375 aaPredicted RBP18.26■□□□□ 0.51
FAM3A-209ENST00000421517 ZDHHC15Q96MV8 337 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 THSD7BQ9C0I4 1608 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 ECM29Q5VYK3 1845 aa18.26■□□□□ 0.51
FAM3A-209ENST00000421517 SURF6O75683 361 aaKnown RBP18.25■□□□□ 0.51
FAM3A-209ENST00000421517 PHKA1P46020 1223 aa18.25■□□□□ 0.51
FAM3A-209ENST00000421517 CRKP46108 304 aa18.25■□□□□ 0.51
FAM3A-209ENST00000421517 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
FAM3A-209ENST00000421517 FKBP1CQ5VVH2 108 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms