RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TRIM47Q96LD4 638 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 COA1Q9GZY4 146 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
TRIM39-206ENST00000420746 SGPL1O95470 568 aa11.86□□□□□ -0.51
TRIM39-206ENST00000420746 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
TRIM39-206ENST00000420746 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRIM39-206ENST00000420746 RAET1EQ8TD07 263 aa11.86□□□□□ -0.51
TRIM39-206ENST00000420746 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
TRIM39-206ENST00000420746 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
TRIM39-206ENST00000420746 EYSQ5T1H1 3165 aa11.85□□□□□ -0.51
TRIM39-206ENST00000420746 ANXA1P04083 346 aa11.85□□□□□ -0.51
TRIM39-206ENST00000420746 EIF2S2P20042 333 aaKnown RBP11.85□□□□□ -0.51
TRIM39-206ENST00000420746 AIMP1Q12904 312 aaKnown RBP11.85□□□□□ -0.51
TRIM39-206ENST00000420746 TRIM28Q13263 835 aaKnown RBP11.85□□□□□ -0.51
TRIM39-206ENST00000420746 DLGAP5Q15398 846 aa11.85□□□□□ -0.51
TRIM39-206ENST00000420746 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
TRIM39-206ENST00000420746 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
TRIM39-206ENST00000420746 FAM205AQ6ZU69 1335 aa11.85□□□□□ -0.51
TRIM39-206ENST00000420746 TTC28Q96AY4 2481 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 MYO1BO43795 1136 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 CCDC152Q4G0S7 254 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 NBPF12Q5TAG4 269 aaPredicted RBP11.84□□□□□ -0.51
TRIM39-206ENST00000420746 KIAA0825Q8IV33 1275 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 PLBD2Q8NHP8 589 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
TRIM39-206ENST00000420746 PRUNE2Q8WUY3 3088 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 OSBPP22059 807 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 PSMC4P43686 418 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 TTLL5Q6EMB2 1281 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 C17orf99Q6UX52 265 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 FBXW7Q969H0 707 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 BABAM1Q9NWV8 329 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 MYPNQ86TC9 1320 aa11.83□□□□□ -0.52
TRIM39-206ENST00000420746 ZSWIM8A7E2V4 1837 aa11.82□□□□□ -0.52
TRIM39-206ENST00000420746 OTOFQ9HC10 1997 aa11.82□□□□□ -0.52
TRIM39-206ENST00000420746 CETPP11597 493 aa11.82□□□□□ -0.52
TRIM39-206ENST00000420746 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
TRIM39-206ENST00000420746 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.82□□□□□ -0.52
TRIM39-206ENST00000420746 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
TRIM39-206ENST00000420746 ZBTB38Q8NAP3 1195 aaPredicted RBP11.82□□□□□ -0.52
TRIM39-206ENST00000420746 FAM122AQ96E09 287 aa11.82□□□□□ -0.52
TRIM39-206ENST00000420746 BIN2Q9UBW5 565 aaPredicted RBP11.82□□□□□ -0.52
TRIM39-206ENST00000420746 ADGRA2Q96PE1 1338 aa11.82□□□□□ -0.52
TRIM39-206ENST00000420746 COL2A1P02458 1487 aaPredicted RBP11.82□□□□□ -0.52
TRIM39-206ENST00000420746 LAMA2P24043 3122 aaKnown RBP11.81□□□□□ -0.52
TRIM39-206ENST00000420746 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 BTBD19C9JJ37 291 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 NEFMP07197 916 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 CTGFP29279 349 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 MAGEA10P43363 369 aaPredicted RBP11.81□□□□□ -0.52
TRIM39-206ENST00000420746 TNFAIP1Q13829 316 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 NECAB2Q7Z6G3 386 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 UNC93B1Q9H1C4 597 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 TSPYL4Q9UJ04 414 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 ECM29Q5VYK3 1845 aa11.81□□□□□ -0.52
TRIM39-206ENST00000420746 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
TRIM39-206ENST00000420746 CCT4P50991 539 aaKnown RBP11.8□□□□□ -0.52
TRIM39-206ENST00000420746 VGLL4Q14135 290 aa11.8□□□□□ -0.52
TRIM39-206ENST00000420746 RASA3Q14644 834 aa11.8□□□□□ -0.52
TRIM39-206ENST00000420746 ANKLE1Q8NAG6 615 aa11.8□□□□□ -0.52
TRIM39-206ENST00000420746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRIM39-206ENST00000420746 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
TRIM39-206ENST00000420746 PAK6Q9NQU5 681 aaPredicted RBP11.8□□□□□ -0.52
TRIM39-206ENST00000420746 CSADQ9Y600 493 aa11.8□□□□□ -0.52
TRIM39-206ENST00000420746 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
TRIM39-206ENST00000420746 FMNL1O95466 1100 aaPredicted RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 TFRCP02786 760 aaKnown RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 MAP3K9P80192 1104 aa11.79□□□□□ -0.52
TRIM39-206ENST00000420746 SNAPC2Q13487 334 aa11.79□□□□□ -0.52
TRIM39-206ENST00000420746 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 C7orf61Q8IZ16 206 aa11.79□□□□□ -0.52
TRIM39-206ENST00000420746 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
TRIM39-206ENST00000420746 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 BSDC1Q9NW68 430 aaPredicted RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 ZMYND8Q9ULU4 1186 aaPredicted RBP11.79□□□□□ -0.52
TRIM39-206ENST00000420746 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
TRIM39-206ENST00000420746 CLRN2A0PK11 232 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 PDE8AO60658 829 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 FKBP1AP62942 108 aaKnown RBP11.78□□□□□ -0.52
TRIM39-206ENST00000420746 GTF2IP78347 998 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 PRKCZQ05513 592 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 PXYLP1Q8TE99 480 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 VEZTQ9HBM0 779 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 MINPP1Q9UNW1 487 aa11.78□□□□□ -0.52
TRIM39-206ENST00000420746 TNFRSF10AO00220 468 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 FCGRTP55899 365 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 NFE2L2Q16236 605 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 CFAP100Q494V2 611 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 TXNRD3Q86VQ6 643 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 MAFAQ8NHW3 353 aaPredicted RBP11.77□□□□□ -0.53
TRIM39-206ENST00000420746 PRMT6Q96LA8 375 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms