RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 VSIG1Q86XK7 387 aa13.19□□□□□ -0.3
PBX1-203ENST00000420696 RNF216Q9NWF9 866 aaPredicted RBP13.19□□□□□ -0.3
PBX1-203ENST00000420696 DAPK3O43293 454 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 KRT3P12035 628 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 RUFY4Q6ZNE9 571 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 KCNG1Q9UIX4 513 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 RAPGEF2Q9Y4G8 1499 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 DNMBPQ6XZF7 1577 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 GNA11P29992 359 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 KIF11P52732 1056 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 PPP1R21Q6ZMI0 780 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
PBX1-203ENST00000420696 FNBP1Q96RU3 617 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 TMX1Q9H3N1 280 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 ZBTB43O43298 467 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
PBX1-203ENST00000420696 IRX3P78415 501 aaPredicted RBP13.18□□□□□ -0.3
PBX1-203ENST00000420696 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 MYD88Q99836 296 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 AGTPBP1Q9UPW5 1226 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 TRIM75PA6NK02 468 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 ST5P78524 1137 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 CCDC170Q8IYT3 715 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 ESYT2A0FGR8 921 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
PBX1-203ENST00000420696 KMT5BQ4FZB7 885 aa13.18□□□□□ -0.3
PBX1-203ENST00000420696 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
PBX1-203ENST00000420696 TERF1P54274 439 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 CCT2P78371 535 aaKnown RBP13.17□□□□□ -0.3
PBX1-203ENST00000420696 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
PBX1-203ENST00000420696 SUDS3Q9H7L9 328 aaPredicted RBP13.17□□□□□ -0.3
PBX1-203ENST00000420696 SMIM24O75264 130 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
PBX1-203ENST00000420696 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 GOLGA8CPA6NN73 597 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 RPS6KA2Q15349 733 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 RTEL1-TNFRSF6BF6WH68 1400 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 SIRT1Q96EB6 747 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 CAPZA3Q96KX2 299 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 Q9H521 79 aa13.17□□□□□ -0.3
PBX1-203ENST00000420696 CNGA4Q8IV77 575 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 GABPAQ06546 454 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 PDCD2Q16342 344 aaPredicted RBP13.16□□□□□ -0.3
PBX1-203ENST00000420696 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 FHOD3Q2V2M9 1422 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 BACH1O14867 736 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 SPOPO43791 374 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 NAPAP54920 295 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 MAIP1Q8WWC4 291 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 NACA2Q9H009 215 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 SMTNP53814 917 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 FAM71BQ8TC56 605 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 FRMD4BQ9Y2L6 1034 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 TMEM110-MUSTN1A8MSY1 372 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 CDR2Q01850 454 aa13.16□□□□□ -0.3
PBX1-203ENST00000420696 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
PBX1-203ENST00000420696 GJB2P29033 226 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 RTN1Q16799 776 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 HHATQ5VTY9 493 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 HACE1Q8IYU2 909 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 SDCCAG3Q96C92 435 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 CABP1Q9NZU7 370 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 TFIP11Q9UBB9 837 aaKnown RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 MCM7P33993 719 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 UAP1Q16222 522 aaPredicted RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 WHAMMP3Q1A5X7 153 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 HDXQ7Z353 690 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 PALM3A6NDB9 673 aaPredicted RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 EXOC5O00471 708 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 UTP14CQ5TAP6 766 aaKnown RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 RASSF4Q9H2L5 321 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 BIRC3Q13489 604 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 UBL4BQ8N7F7 174 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 GLT8D2Q9H1C3 349 aa13.15□□□□□ -0.3
PBX1-203ENST00000420696 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
PBX1-203ENST00000420696 IFT81Q8WYA0 676 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 ARHGEF2Q92974 986 aaKnown RBP13.14□□□□□ -0.31
PBX1-203ENST00000420696 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 GOLGA6BA6NDN3 693 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
PBX1-203ENST00000420696 CCDC65Q8IXS2 484 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 RTEL1Q9NZ71 1219 aa13.14□□□□□ -0.31
PBX1-203ENST00000420696 HFM1A2PYH4 1435 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms