RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 TIMM10P62072 90 aa20.5■□□□□ 0.87
SEC22C-206ENST00000420163 MAP1SQ66K74 1059 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-206ENST00000420163 VPS37DQ86XT2 251 aa20.5■□□□□ 0.87
SEC22C-206ENST00000420163 MYO3BQ8WXR4 1341 aa20.5■□□□□ 0.87
SEC22C-206ENST00000420163 A0A1B0GUL7 405 aa20.49■□□□□ 0.87
SEC22C-206ENST00000420163 USP17L8P0C7I0 530 aa20.49■□□□□ 0.87
SEC22C-206ENST00000420163 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
SEC22C-206ENST00000420163 RBM26Q5T8P6 1007 aaKnown RBP20.49■□□□□ 0.87
SEC22C-206ENST00000420163 KIAA0825Q8IV33 1275 aa20.49■□□□□ 0.87
SEC22C-206ENST00000420163 RPAP2Q8IXW5 612 aaPredicted RBP20.49■□□□□ 0.87
SEC22C-206ENST00000420163 CRBNQ96SW2 442 aa20.49■□□□□ 0.87
SEC22C-206ENST00000420163 CHMP4BQ9H444 224 aaKnown RBP20.49■□□□□ 0.87
SEC22C-206ENST00000420163 EXOC6BQ9Y2D4 811 aa20.49■□□□□ 0.87
SEC22C-206ENST00000420163 ECM29Q5VYK3 1845 aa20.48■□□□□ 0.87
SEC22C-206ENST00000420163 TRPM7Q96QT4 1865 aa20.48■□□□□ 0.87
SEC22C-206ENST00000420163 PHKA1P46020 1223 aa20.48■□□□□ 0.87
SEC22C-206ENST00000420163 CHAF1AQ13111 956 aaPredicted RBP20.48■□□□□ 0.87
SEC22C-206ENST00000420163 KIF4BQ2VIQ3 1234 aa20.48■□□□□ 0.87
SEC22C-206ENST00000420163 ASTN2O75129 1339 aaPredicted RBP20.48■□□□□ 0.87
SEC22C-206ENST00000420163 ITGBL1O95965 494 aaPredicted RBP20.47■□□□□ 0.87
SEC22C-206ENST00000420163 XAGE2Q96GT9 111 aa20.47■□□□□ 0.87
SEC22C-206ENST00000420163 MYOZ2Q9NPC6 264 aa20.47■□□□□ 0.87
SEC22C-206ENST00000420163 AKAP2Q9Y2D5 859 aa20.47■□□□□ 0.87
SEC22C-206ENST00000420163 HSPA6P17066 643 aa20.46■□□□□ 0.87
SEC22C-206ENST00000420163 FKBP1AP62942 108 aaKnown RBP20.46■□□□□ 0.87
SEC22C-206ENST00000420163 GRIK5Q16478 980 aa20.46■□□□□ 0.87
SEC22C-206ENST00000420163 AKAP11Q9UKA4 1901 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 F8W031 263 aaPredicted RBP20.45■□□□□ 0.86
SEC22C-206ENST00000420163 FRAT2O75474 233 aaPredicted RBP20.45■□□□□ 0.86
SEC22C-206ENST00000420163 FMR1Q06787 632 aaKnown RBP eCLIP20.45■□□□□ 0.86
SEC22C-206ENST00000420163 TNNI3KQ59H18 835 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 MFSD14BQ5SR56 506 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 CCDC102BQ68D86 513 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 CNTROBQ8N137 903 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 NEUROD6Q96NK8 337 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 PGAP2Q9UHJ9 254 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 FPGT-TNNI3KV9GXZ4 949 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 PASKQ96RG2 1323 aa20.45■□□□□ 0.86
SEC22C-206ENST00000420163 SUPT16HQ9Y5B9 1047 aaKnown RBP20.44■□□□□ 0.86
SEC22C-206ENST00000420163 PCDHAC2Q9Y5I4 1007 aa20.44■□□□□ 0.86
SEC22C-206ENST00000420163 HMMRO75330 724 aa20.43■□□□□ 0.86
SEC22C-206ENST00000420163 ZC3H15Q8WU90 426 aaKnown RBP20.43■□□□□ 0.86
SEC22C-206ENST00000420163 GLIS2Q9BZE0 524 aaPredicted RBP20.43■□□□□ 0.86
SEC22C-206ENST00000420163 GPR108Q9NPR9 543 aa20.43■□□□□ 0.86
SEC22C-206ENST00000420163 MYO5AQ9Y4I1 1855 aaKnown RBP20.42■□□□□ 0.86
SEC22C-206ENST00000420163 TRAF5O00463 557 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 HTRA3P83110 453 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 SCARF1Q14162 830 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 NBPF9Q3BBW0 867 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 OGFOD1Q8N543 542 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 DBNDD2Q9BQY9 259 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 TLR7Q9NYK1 1049 aaKnown RBP20.42■□□□□ 0.86
SEC22C-206ENST00000420163 GGA3Q9NZ52 723 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 PCDHB15Q9Y5E8 787 aa20.42■□□□□ 0.86
SEC22C-206ENST00000420163 APBB1O00213 710 aa20.41■□□□□ 0.86
SEC22C-206ENST00000420163 RASGRF1Q13972 1273 aa20.41■□□□□ 0.86
SEC22C-206ENST00000420163 DLK2Q6UY11 383 aa20.41■□□□□ 0.86
SEC22C-206ENST00000420163 EAF2Q96CJ1 260 aaPredicted RBP20.41■□□□□ 0.86
SEC22C-206ENST00000420163 ZBED3Q96IU2 234 aaPredicted RBP20.41■□□□□ 0.86
SEC22C-206ENST00000420163 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
SEC22C-206ENST00000420163 WNT10BO00744 389 aa20.4■□□□□ 0.86
SEC22C-206ENST00000420163 AOX1Q06278 1338 aa20.4■□□□□ 0.86
SEC22C-206ENST00000420163 RHPN1Q8TCX5 695 aa20.4■□□□□ 0.86
SEC22C-206ENST00000420163 TBC1D22AQ8WUA7 517 aa20.4■□□□□ 0.86
SEC22C-206ENST00000420163 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
SEC22C-206ENST00000420163 GNL3LQ9NVN8 582 aaKnown RBP20.4■□□□□ 0.86
SEC22C-206ENST00000420163 DBNLQ9UJU6 430 aaKnown RBP20.4■□□□□ 0.86
SEC22C-206ENST00000420163 HDAC9Q9UKV0 1011 aa20.4■□□□□ 0.86
SEC22C-206ENST00000420163 TTF2Q9UNY4 1162 aaKnown RBP20.4■□□□□ 0.86
SEC22C-206ENST00000420163 ADM5C9JUS6 153 aa20.39■□□□□ 0.85
SEC22C-206ENST00000420163 SEMA3EO15041 775 aa20.39■□□□□ 0.85
SEC22C-206ENST00000420163 APLP1P51693 650 aa20.39■□□□□ 0.85
SEC22C-206ENST00000420163 GORABQ5T7V8 394 aa20.39■□□□□ 0.85
SEC22C-206ENST00000420163 ANGEL2Q5VTE6 544 aaKnown RBP20.39■□□□□ 0.85
SEC22C-206ENST00000420163 ERC1Q8IUD2 1116 aa20.39■□□□□ 0.85
SEC22C-206ENST00000420163 CCDC8Q9H0W5 538 aaPredicted RBP20.39■□□□□ 0.85
SEC22C-206ENST00000420163 DENND2AQ9ULE3 1009 aa20.39■□□□□ 0.85
SEC22C-206ENST00000420163 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.85
SEC22C-206ENST00000420163 MYH2Q9UKX2 1941 aa20.39■□□□□ 0.85
SEC22C-206ENST00000420163 ZBTB22O15209 634 aa20.38■□□□□ 0.85
SEC22C-206ENST00000420163 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
SEC22C-206ENST00000420163 HSP90AB4PQ58FF6 505 aa20.38■□□□□ 0.85
SEC22C-206ENST00000420163 PI16Q6UXB8 463 aa20.38■□□□□ 0.85
SEC22C-206ENST00000420163 USP48Q86UV5 1035 aa20.38■□□□□ 0.85
SEC22C-206ENST00000420163 WDR66Q8TBY9 1149 aa20.38■□□□□ 0.85
SEC22C-206ENST00000420163 ARID4AP29374 1257 aaPredicted RBP20.37■□□□□ 0.85
SEC22C-206ENST00000420163 MMP14P50281 582 aa20.37■□□□□ 0.85
SEC22C-206ENST00000420163 DLGAP5Q15398 846 aa20.37■□□□□ 0.85
SEC22C-206ENST00000420163 CDC37L1Q7L3B6 337 aa20.37■□□□□ 0.85
SEC22C-206ENST00000420163 MTMR14Q8NCE2 650 aa20.37■□□□□ 0.85
SEC22C-206ENST00000420163 HMG20BQ9P0W2 317 aa20.37■□□□□ 0.85
SEC22C-206ENST00000420163 PDS5AQ29RF7 1337 aaKnown RBP20.36■□□□□ 0.85
SEC22C-206ENST00000420163 SALL1Q9NSC2 1324 aa20.36■□□□□ 0.85
SEC22C-206ENST00000420163 PRDX5P30044 214 aa20.36■□□□□ 0.85
SEC22C-206ENST00000420163 KRT26Q7Z3Y9 468 aa20.36■□□□□ 0.85
SEC22C-206ENST00000420163 AACSQ86V21 672 aa20.36■□□□□ 0.85
SEC22C-206ENST00000420163 EXOC6Q8TAG9 804 aa20.36■□□□□ 0.85
SEC22C-206ENST00000420163 DCPSQ96C86 337 aaKnown RBP20.36■□□□□ 0.85
SEC22C-206ENST00000420163 PRMT6Q96LA8 375 aaPredicted RBP20.36■□□□□ 0.85
SEC22C-206ENST00000420163 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms