RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 MANSC4A6NHS7 340 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 DEFB129Q9H1M3 183 aa13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
TNFAIP3-202ENST00000420009 RBBP6Q7Z6E9 1792 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 H7C1W4 665 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 IGF2BP3O00425 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 APAF1O14727 1248 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 ZBTB48P10074 688 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 CD44P16070 742 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 INHBEP58166 350 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 CWF19L2Q2TBE0 894 aaKnown RBP13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 TRIM17Q9Y577 477 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
TNFAIP3-202ENST00000420009 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 GTF2IP78347 998 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 INTS3Q68E01 1043 aaKnown RBP13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 CERS5Q8N5B7 392 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 WNK4Q96J92 1243 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 CLMNQ96JQ2 1002 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 ANKRD2Q9GZV1 360 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 PPP2R3BQ9Y5P8 575 aa13.11□□□□□ -0.31
TNFAIP3-202ENST00000420009 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
TNFAIP3-202ENST00000420009 ITGA6P23229 1130 aa13.1□□□□□ -0.31
TNFAIP3-202ENST00000420009 CASP7P55210 303 aa13.1□□□□□ -0.31
TNFAIP3-202ENST00000420009 DLGAP5Q15398 846 aa13.1□□□□□ -0.31
TNFAIP3-202ENST00000420009 SLC10A4Q96EP9 437 aa13.1□□□□□ -0.31
TNFAIP3-202ENST00000420009 CD209Q9NNX6 404 aa13.1□□□□□ -0.31
TNFAIP3-202ENST00000420009 ECM29Q5VYK3 1845 aa13.1□□□□□ -0.31
TNFAIP3-202ENST00000420009 PPP1R12BO60237 982 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-202ENST00000420009 CSF1RP07333 972 aa13.09□□□□□ -0.31
TNFAIP3-202ENST00000420009 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-202ENST00000420009 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-202ENST00000420009 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-202ENST00000420009 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
TNFAIP3-202ENST00000420009 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
TNFAIP3-202ENST00000420009 GJA5P36382 358 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 CHRNDQ07001 517 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 CRHR2Q13324 411 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 GCKRQ14397 625 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 G2E3Q7L622 706 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 ERO1AQ96HE7 468 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 MPHOSPH8Q99549 860 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 STK31Q9BXU1 1019 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 PTPN22Q9Y2R2 807 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 AOX1Q06278 1338 aa13.08□□□□□ -0.32
TNFAIP3-202ENST00000420009 SNAP23O00161 211 aa13.07□□□□□ -0.32
TNFAIP3-202ENST00000420009 KCNJ4P48050 445 aa13.07□□□□□ -0.32
TNFAIP3-202ENST00000420009 CLCN6P51797 869 aa13.07□□□□□ -0.32
TNFAIP3-202ENST00000420009 FKBP1AP62942 108 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-202ENST00000420009 CAP1Q01518 475 aa13.07□□□□□ -0.32
TNFAIP3-202ENST00000420009 CD99L2Q8TCZ2 262 aa13.07□□□□□ -0.32
TNFAIP3-202ENST00000420009 OTOFQ9HC10 1997 aa13.07□□□□□ -0.32
TNFAIP3-202ENST00000420009 CLRN2A0PK11 232 aa13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 TESPA1A2RU30 521 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 IL1R1P14778 569 aa13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 SUPT20HL1Q3ZLR7 823 aa13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 CFAP100Q494V2 611 aa13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 NBPF12Q5TAG4 269 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 PRMT6Q96LA8 375 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 PTPN18Q99952 460 aa13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 PRKRIP1Q9H875 184 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-202ENST00000420009 MYO1BO43795 1136 aa13.05□□□□□ -0.32
TNFAIP3-202ENST00000420009 IREB2P48200 963 aaKnown RBP13.05□□□□□ -0.32
TNFAIP3-202ENST00000420009 OTUD7BQ6GQQ9 843 aa13.05□□□□□ -0.32
TNFAIP3-202ENST00000420009 ANKRD13AQ8IZ07 590 aa13.05□□□□□ -0.32
TNFAIP3-202ENST00000420009 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
TNFAIP3-202ENST00000420009 EFCC1Q9HA90 598 aa13.05□□□□□ -0.32
TNFAIP3-202ENST00000420009 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 TAF5LO75529 589 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 EN2P19622 333 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 SP3Q02447 781 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 FLIIQ13045 1269 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 RASA3Q14644 834 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 TWISTNBQ3B726 338 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 ZNF804AQ7Z570 1209 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 VEZTQ9HBM0 779 aa13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 KIAA0100Q14667 2235 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-202ENST00000420009 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
TNFAIP3-202ENST00000420009 HELBQ8NG08 1087 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-202ENST00000420009 DNAAF4Q8WXU2 420 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms