RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 DDX19AQ9NUU7 478 aaKnown RBP9.71□□□□□ -0.86
UBR4-206ENST00000419533 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
UBR4-206ENST00000419533 RBM10P98175 930 aaKnown RBP9.7□□□□□ -0.86
UBR4-206ENST00000419533 RTN1Q16799 776 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 SYCP3Q8IZU3 236 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 FAM177A1Q8N128 213 aaPredicted RBP9.7□□□□□ -0.86
UBR4-206ENST00000419533 FSIP1Q8NA03 581 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 DRC1Q96MC2 740 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 CCDC66A2RUB6 948 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 KIF1AQ12756 1690 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 IDEP14735 1019 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 GBP2P32456 591 aaPredicted RBP9.7□□□□□ -0.86
UBR4-206ENST00000419533 IGSF1Q8N6C5 1336 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 RTL9Q8NET4 1388 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 RIMBP2O15034 1052 aa9.7□□□□□ -0.86
UBR4-206ENST00000419533 CCDC40Q4G0X9 1142 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 SMARCC2Q8TAQ2 1214 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 UBE2Q2Q8WVN8 375 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 FERMT2Q96AC1 680 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 ZSCAN16Q9H4T2 348 aaPredicted RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 SPON1Q9HCB6 807 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 DDX21Q9NR30 783 aaKnown RBP eCLIP9.69□□□□□ -0.86
UBR4-206ENST00000419533 DENND2AQ9ULE3 1009 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 RNF113AO15541 343 aaKnown RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 STX6O43752 255 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 ALDH1B1P30837 517 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 RBM25P49756 843 aaKnown RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 PDE1AP54750 535 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 TSHZ3Q63HK5 1081 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 DNAJC10Q8IXB1 793 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 USP19O94966 1318 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 ANKRD62A6NC57 917 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 ZSCAN12O43309 604 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 SFPQP23246 707 aaKnown RBP eCLIP9.69□□□□□ -0.86
UBR4-206ENST00000419533 GRM1Q13255 1194 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 SYCE3A1L190 88 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 CKAP2LQ8IYA6 745 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 PLBD2Q8NHP8 589 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 POLR1AO95602 1720 aaPredicted RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 MTIF2P46199 727 aaKnown RBP9.69□□□□□ -0.86
UBR4-206ENST00000419533 USP37Q86T82 979 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 BICD1Q96G01 975 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 SH2D4AQ9H788 454 aa9.69□□□□□ -0.86
UBR4-206ENST00000419533 TOP1P11387 765 aaKnown RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 HEATR3Q7Z4Q2 680 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 BRF1Q92994 677 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 RMND1Q9NWS8 449 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 YEATS4O95619 227 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 TTC6Q86TZ1 520 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 VTI1AQ96AJ9 217 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 C6orf50Q9HD87 102 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 MCM9Q9NXL9 1143 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 CWC15Q9P013 229 aaKnown RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 PALLDQ8WX93 1383 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 CCDC174Q6PII3 467 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 CPDO75976 1380 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 ERBB4Q15303 1308 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 KIF2AO00139 706 aaPredicted RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 EIF3JO75822 258 aaKnown RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 NAPAP54920 295 aa9.68□□□□□ -0.86
UBR4-206ENST00000419533 CWF19L2Q2TBE0 894 aaKnown RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 RRP36Q96EU6 259 aaKnown RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
UBR4-206ENST00000419533 CDK12Q9NYV4 1490 aaPredicted RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 MAST3O60307 1309 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 SH3TC1Q8TE82 1336 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 SDSP20132 328 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 ANAPC15P60006 121 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 TCERG1LQ5VWI1 586 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 CCDC102BQ68D86 513 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 TRMT1LQ7Z2T5 733 aaKnown RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 MAGEB6Q8N7X4 407 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 ZNF142P52746 1687 aaPredicted RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 EZRP15311 586 aaKnown RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 RAB11FIP4Q86YS3 637 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 NUP88Q99567 741 aaPredicted RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 ALG1Q9BT22 464 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 LGR6Q9HBX8 967 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 EXOC1Q9NV70 894 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 PA2G4Q9UQ80 394 aaKnown RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 UFL1O94874 794 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 ADRA2BP18089 450 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 EIF6P56537 245 aaKnown RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 PLS1Q14651 629 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 ENOX2Q16206 610 aaKnown RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 ZSCAN30Q86W11 494 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
UBR4-206ENST00000419533 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
UBR4-206ENST00000419533 VAMP4O75379 141 aa9.66□□□□□ -0.86
UBR4-206ENST00000419533 TFCP2Q12800 502 aa9.66□□□□□ -0.86
UBR4-206ENST00000419533 TXNRD1Q16881 649 aa9.66□□□□□ -0.86
UBR4-206ENST00000419533 TDRD12Q587J7 1177 aaKnown RBP9.66□□□□□ -0.86
UBR4-206ENST00000419533 HELBQ8NG08 1087 aaPredicted RBP9.66□□□□□ -0.86
UBR4-206ENST00000419533 ITSN1Q15811 1721 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms