RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 KIAA0825Q8IV33 1275 aa25.74■■□□□ 1.71
PKNOX1-202ENST00000418336 JAG2Q9Y219 1238 aa25.74■■□□□ 1.71
PKNOX1-202ENST00000418336 PNMA6EA0A0J9YXQ4 647 aa25.73■■□□□ 1.71
PKNOX1-202ENST00000418336 GNAI2P04899 355 aa25.73■■□□□ 1.71
PKNOX1-202ENST00000418336 MMP14P50281 582 aa25.73■■□□□ 1.71
PKNOX1-202ENST00000418336 ANGEL2Q5VTE6 544 aaKnown RBP25.73■■□□□ 1.71
PKNOX1-202ENST00000418336 PCDHAC2Q9Y5I4 1007 aa25.73■■□□□ 1.71
PKNOX1-202ENST00000418336 TLL2Q9Y6L7 1015 aa25.73■■□□□ 1.71
PKNOX1-202ENST00000418336 THSD7BQ9C0I4 1608 aa25.73■■□□□ 1.71
PKNOX1-202ENST00000418336 COL1A1P02452 1464 aaPredicted RBP25.72■■□□□ 1.71
PKNOX1-202ENST00000418336 PITPNM2Q9BZ72 1349 aa25.72■■□□□ 1.71
PKNOX1-202ENST00000418336 SRGAP3O43295 1099 aa25.72■■□□□ 1.71
PKNOX1-202ENST00000418336 CELF2O95319 508 aaKnown RBP25.72■■□□□ 1.71
PKNOX1-202ENST00000418336 BCAMP50895 628 aa25.72■■□□□ 1.71
PKNOX1-202ENST00000418336 KRT26Q7Z3Y9 468 aa25.72■■□□□ 1.71
PKNOX1-202ENST00000418336 AOX1Q06278 1338 aa25.71■■□□□ 1.71
PKNOX1-202ENST00000418336 IL15P40933 162 aaPredicted RBP25.71■■□□□ 1.71
PKNOX1-202ENST00000418336 VEGFBP49765 207 aa25.71■■□□□ 1.71
PKNOX1-202ENST00000418336 MTMR14Q8NCE2 650 aa25.71■■□□□ 1.71
PKNOX1-202ENST00000418336 GRIK5Q16478 980 aa25.7■■□□□ 1.7
PKNOX1-202ENST00000418336 SAPCD2Q86UD0 394 aa25.7■■□□□ 1.7
PKNOX1-202ENST00000418336 LPIN2Q92539 896 aa25.7■■□□□ 1.7
PKNOX1-202ENST00000418336 POLA2Q14181 598 aa25.69■■□□□ 1.7
PKNOX1-202ENST00000418336 OGFOD1Q8N543 542 aa25.69■■□□□ 1.7
PKNOX1-202ENST00000418336 PANK1Q8TE04 598 aa25.69■■□□□ 1.7
PKNOX1-202ENST00000418336 DCPSQ96C86 337 aaKnown RBP25.69■■□□□ 1.7
PKNOX1-202ENST00000418336 SCAF8Q9UPN6 1271 aaKnown RBP25.69■■□□□ 1.7
PKNOX1-202ENST00000418336 IQSEC3Q9UPP2 1182 aaPredicted RBP25.69■■□□□ 1.7
PKNOX1-202ENST00000418336 ECM29Q5VYK3 1845 aa25.68■■□□□ 1.7
PKNOX1-202ENST00000418336 ZBTB22O15209 634 aa25.68■■□□□ 1.7
PKNOX1-202ENST00000418336 DEFB115Q30KQ5 88 aa25.67■■□□□ 1.7
PKNOX1-202ENST00000418336 FTSJ3Q8IY81 847 aaKnown RBP25.67■■□□□ 1.7
PKNOX1-202ENST00000418336 IFIT1P09914 478 aaKnown RBP25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 ATP2B3Q16720 1220 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 CAVIN4Q5BKX8 364 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 MFSD14BQ5SR56 506 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 ITPRIPQ8IWB1 547 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 SSH3Q8TE77 659 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 CDCA5Q96FF9 252 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 C1orf115Q9H7X2 142 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 CEP126Q9P2H0 1117 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 RCAN3Q9UKA8 241 aa25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 ABT1Q9ULW3 272 aaKnown RBP25.66■■□□□ 1.7
PKNOX1-202ENST00000418336 SLC5A1P13866 664 aa25.65■■□□□ 1.7
PKNOX1-202ENST00000418336 ATP8B2P98198 1209 aa25.65■■□□□ 1.7
PKNOX1-202ENST00000418336 HDAC9Q9UKV0 1011 aa25.65■■□□□ 1.7
PKNOX1-202ENST00000418336 F8W031 263 aaPredicted RBP25.64■■□□□ 1.7
PKNOX1-202ENST00000418336 ADORA1P30542 326 aa25.64■■□□□ 1.7
PKNOX1-202ENST00000418336 TFCP2Q12800 502 aa25.64■■□□□ 1.7
PKNOX1-202ENST00000418336 CFAP100Q494V2 611 aa25.64■■□□□ 1.7
PKNOX1-202ENST00000418336 SULF1Q8IWU6 871 aa25.64■■□□□ 1.7
PKNOX1-202ENST00000418336 HHIPL1Q96JK4 782 aa25.64■■□□□ 1.7
PKNOX1-202ENST00000418336 ZNF408Q9H9D4 720 aa25.64■■□□□ 1.7
PKNOX1-202ENST00000418336 SPDYE2BA6NHP3 402 aa25.63■■□□□ 1.69
PKNOX1-202ENST00000418336 SPDYE6P0CI01 402 aa25.63■■□□□ 1.69
PKNOX1-202ENST00000418336 PRMT6Q96LA8 375 aaPredicted RBP25.63■■□□□ 1.69
PKNOX1-202ENST00000418336 MYH13Q9UKX3 1938 aa25.63■■□□□ 1.69
PKNOX1-202ENST00000418336 WDR33Q9C0J8 1336 aaKnown RBP25.63■■□□□ 1.69
PKNOX1-202ENST00000418336 VPS37DQ86XT2 251 aa25.62■■□□□ 1.69
PKNOX1-202ENST00000418336 PHKA1P46020 1223 aa25.61■■□□□ 1.69
PKNOX1-202ENST00000418336 CYP4F22Q6NT55 531 aa25.61■■□□□ 1.69
PKNOX1-202ENST00000418336 TIMM10P62072 90 aa25.6■■□□□ 1.69
PKNOX1-202ENST00000418336 CHAF1AQ13111 956 aaPredicted RBP25.6■■□□□ 1.69
PKNOX1-202ENST00000418336 DLGAP5Q15398 846 aa25.6■■□□□ 1.69
PKNOX1-202ENST00000418336 PRAMEF18Q5VWM3 479 aa25.6■■□□□ 1.69
PKNOX1-202ENST00000418336 GBA2Q9HCG7 927 aaPredicted RBP25.6■■□□□ 1.69
PKNOX1-202ENST00000418336 SERPINA10Q9UK55 444 aa25.6■■□□□ 1.69
PKNOX1-202ENST00000418336 TTF2Q9UNY4 1162 aaKnown RBP25.6■■□□□ 1.69
PKNOX1-202ENST00000418336 PAPPA2Q9BXP8 1791 aa25.59■■□□□ 1.69
PKNOX1-202ENST00000418336 C20orf194Q5TEA3 1177 aa25.59■■□□□ 1.69
PKNOX1-202ENST00000418336 CEP85Q6P2H3 762 aa25.59■■□□□ 1.69
PKNOX1-202ENST00000418336 TBC1D22AQ8WUA7 517 aa25.59■■□□□ 1.69
PKNOX1-202ENST00000418336 CAPNS2Q96L46 248 aa25.59■■□□□ 1.69
PKNOX1-202ENST00000418336 SSC5DA1L4H1 1573 aa25.59■■□□□ 1.69
PKNOX1-202ENST00000418336 A0A1B0GUL7 405 aa25.58■■□□□ 1.69
PKNOX1-202ENST00000418336 HSPA1AP0DMV8 641 aaKnown RBP25.58■■□□□ 1.69
PKNOX1-202ENST00000418336 HSPA1BP0DMV9 641 aaKnown RBP25.58■■□□□ 1.69
PKNOX1-202ENST00000418336 MVPQ14764 893 aaKnown RBP25.58■■□□□ 1.69
PKNOX1-202ENST00000418336 CCDC102BQ68D86 513 aa25.58■■□□□ 1.69
PKNOX1-202ENST00000418336 NOP58Q9Y2X3 529 aaKnown RBP25.58■■□□□ 1.69
PKNOX1-202ENST00000418336 FAM155AB1AL88 458 aaPredicted RBP25.57■■□□□ 1.68
PKNOX1-202ENST00000418336 CRKP46108 304 aa25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 APOBEC3FQ8IUX4 373 aaKnown RBP25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 XAGE2Q96GT9 111 aa25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 MRIQ9BWK5 157 aa25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 WBP1LQ9NX94 342 aa25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 COG6Q9Y2V7 657 aa25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 SUGT1Q9Y2Z0 365 aa25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 SALL1Q9NSC2 1324 aa25.56■■□□□ 1.68
PKNOX1-202ENST00000418336 HUNKP57058 714 aa25.55■■□□□ 1.68
PKNOX1-202ENST00000418336 HDLBPQ00341 1268 aaKnown RBP25.55■■□□□ 1.68
PKNOX1-202ENST00000418336 SPDYE2Q495Y8 402 aa25.55■■□□□ 1.68
PKNOX1-202ENST00000418336 ZBTB40Q9NUA8 1239 aa25.55■■□□□ 1.68
PKNOX1-202ENST00000418336 CLRN2A0PK11 232 aa25.54■■□□□ 1.68
PKNOX1-202ENST00000418336 SEMA3EO15041 775 aa25.54■■□□□ 1.68
PKNOX1-202ENST00000418336 AOC2O75106 756 aa25.54■■□□□ 1.68
PKNOX1-202ENST00000418336 RASGRF1Q13972 1273 aa25.54■■□□□ 1.68
PKNOX1-202ENST00000418336 MOB2Q70IA6 237 aa25.54■■□□□ 1.68
PKNOX1-202ENST00000418336 FRAT2O75474 233 aaPredicted RBP25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 MS4A1P11836 297 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms