RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 A0A1W2PQ64 194 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 A0A1W2PQD8 194 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 NBPF7P0C2Y1 421 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 LMOD1P29536 600 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 NLRP12P59046 1061 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 OS9Q13438 667 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 MCM6Q14566 821 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 MMS22LQ6ZRQ5 1243 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 CCDC91Q7Z6B0 441 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 HSD3B7Q9H2F3 369 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 A0A0D9SFI3 127 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 GSCP56915 257 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 KRT32Q14532 448 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 MCTP2Q6DN12 878 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 LRRC31Q6UY01 552 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 GPATCH11Q8N954 259 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 DHX58Q96C10 678 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 RAB21Q9UL25 225 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 PCDHA7Q9UN72 937 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 FAN1Q9Y2M0 1017 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 NUTM2FA1L443 756 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 CBFA2T2O43439 604 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 NUTM2GQ5VZR2 741 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 CEP89Q96ST8 783 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 A0A1B0GVL5 298 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 ATP1A3P13637 1013 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 NDUFA8P51970 172 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 SCRN1Q12765 414 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 L1RE1Q9UN81 338 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 N4BP1O75113 896 aaKnown RBP9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 UBASH3AP57075 661 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 CT47A1Q5JQC4 288 aaPredicted RBP9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 VSTM4Q8IW00 320 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 DNAJC5Q9H3Z4 198 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 ANKZF1Q9H8Y5 726 aa9.25□□□□□ -0.93
HMGXB4-202ENST00000418170 POTEB2H3BUK9 544 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 CHMP4BP1P59074 171 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 USPL1Q5W0Q7 1092 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 MSANTD4Q8NCY6 345 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 MAP3K19Q56UN5 1328 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 ERLIN1O75477 346 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 SLC3A2P08195 630 aaKnown RBP9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 CCDC172P0C7W6 258 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 HSP90B1P14625 803 aaKnown RBP9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 MTX1Q13505 466 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 E2F4Q16254 413 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 HSP90AB2PQ58FF8 381 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 Q6ZUG5 572 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 SRGAP1Q7Z6B7 1085 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 ILDR1Q86SU0 546 aaPredicted RBP9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 TADA2BQ86TJ2 420 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 NSUN7Q8NE18 718 aaKnown RBP9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 FAM71BQ8TC56 605 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 DPF2Q92785 391 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 NEK1Q96PY6 1258 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 BIN1O00499 593 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 PPFIA4O75335 1185 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 CEP83Q9Y592 693 aa9.24□□□□□ -0.93
HMGXB4-202ENST00000418170 OVOS2A0A0J9YW53 1432 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 APPP05067 770 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 TOP1P11387 765 aaKnown RBP9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 OVOS2Q6IE36 1432 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 A0A087WUV0 522 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 PFKFB2O60825 505 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 CUTAO60888 179 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 ALDH1L1O75891 902 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 SERPINC1P01008 464 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 CFAP100Q494V2 611 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 CNNM3Q8NE01 707 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 BAG1Q99933 345 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 CXorf56Q9H5V9 222 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 PHAXQ9H814 394 aaKnown RBP9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 CAMTA1Q9Y6Y1 1673 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 ANKRD65E5RJM6 399 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 STX10O60499 249 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 GOLGA8FQ08AF8 430 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 GOLGA8DPQ0D2H9 430 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 ZNF589Q86UQ0 364 aaPredicted RBP9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 PNKPQ96T60 521 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 LAMA4Q16363 1823 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 TAF5LO75529 589 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 CTDNEP1O95476 244 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 FOSBP53539 338 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 TUBB4BP68371 445 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 HSP90B2PQ58FF3 399 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 AACSQ86V21 672 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 SIL1Q9H173 461 aa9.23□□□□□ -0.93
HMGXB4-202ENST00000418170 KDRP35968 1356 aa9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 PTPDC1A2A3K4 754 aa9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 PRR29P0C7W0 189 aa9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 DNAJC21Q5F1R6 531 aaKnown RBP9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 CCDC12Q8WUD4 166 aaPredicted RBP9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 ZNF622Q969S3 477 aaKnown RBP eCLIP9.22□□□□□ -0.932e-6■□□□□ 9.7
HMGXB4-202ENST00000418170 BICC1Q9H694 974 aaKnown RBP9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 ABCB6Q9NP58 842 aa9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 MED4Q9NPJ6 270 aa9.22□□□□□ -0.93
HMGXB4-202ENST00000418170 ALS2Q96Q42 1657 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms