RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 BECN1Q14457 450 aa24.97■■□□□ 1.59
CASC3-203ENST00000418132 UBE3CQ15386 1083 aa24.97■■□□□ 1.59
CASC3-203ENST00000418132 SLC9C2Q5TAH2 1124 aa24.97■■□□□ 1.59
CASC3-203ENST00000418132 CCDC129Q6ZRS4 1044 aa24.97■■□□□ 1.59
CASC3-203ENST00000418132 ZNF622Q969S3 477 aaKnown RBP eCLIP24.97■■□□□ 1.594e-7■■■□□ 14.9
CASC3-203ENST00000418132 SLC4A3P48751 1232 aa24.96■■□□□ 1.59
CASC3-203ENST00000418132 MAP3K12Q12852 859 aa24.96■■□□□ 1.59
CASC3-203ENST00000418132 NECTIN1Q15223 517 aa24.96■■□□□ 1.59
CASC3-203ENST00000418132 TBC1D16Q8TBP0 767 aa24.96■■□□□ 1.59
CASC3-203ENST00000418132 RBM8AQ9Y5S9 174 aaKnown RBP24.96■■□□□ 1.59
CASC3-203ENST00000418132 CACNA1SQ13698 1873 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 PDE6AP16499 860 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 WASHC4Q2M389 1173 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 KCNB2Q92953 911 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 SNX21Q969T3 373 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 TBC1D2Q9BYX2 928 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 POLLQ9UGP5 575 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 WWC3Q9ULE0 1092 aa24.95■■□□□ 1.58
CASC3-203ENST00000418132 M0R2C6 588 aa24.94■■□□□ 1.58
CASC3-203ENST00000418132 CHRNA5P30532 468 aa24.94■■□□□ 1.58
CASC3-203ENST00000418132 TCRBV5S4A2TA0A5A2 114 aa24.94■■□□□ 1.58
CASC3-203ENST00000418132 DAXXQ9UER7 740 aaPredicted RBP24.94■■□□□ 1.58
CASC3-203ENST00000418132 ZNF804AQ7Z570 1209 aa24.93■■□□□ 1.58
CASC3-203ENST00000418132 CNKSR1Q969H4 720 aa24.93■■□□□ 1.58
CASC3-203ENST00000418132 PUS7LQ9H0K6 701 aaKnown RBP24.93■■□□□ 1.58
CASC3-203ENST00000418132 ZNF532Q9HCE3 1301 aa24.93■■□□□ 1.58
CASC3-203ENST00000418132 DUOX1Q9NRD9 1551 aa24.93■■□□□ 1.58
CASC3-203ENST00000418132 FRAT2O75474 233 aaPredicted RBP24.93■■□□□ 1.58
CASC3-203ENST00000418132 TDRD7Q8NHU6 1098 aaKnown RBP24.93■■□□□ 1.58
CASC3-203ENST00000418132 GPR101Q96P66 508 aaPredicted RBP24.93■■□□□ 1.58
CASC3-203ENST00000418132 SNX14Q9Y5W7 946 aa24.93■■□□□ 1.58
CASC3-203ENST00000418132 DLEC1Q9Y238 1755 aa24.92■■□□□ 1.58
CASC3-203ENST00000418132 KIF13BQ9NQT8 1826 aa24.92■■□□□ 1.58
CASC3-203ENST00000418132 PRPF40BQ6NWY9 871 aaKnown RBP24.92■■□□□ 1.58
CASC3-203ENST00000418132 RASEFQ8IZ41 740 aa24.92■■□□□ 1.58
CASC3-203ENST00000418132 DSCC1Q9BVC3 393 aa24.92■■□□□ 1.58
CASC3-203ENST00000418132 MTFR1LQ9H019 292 aa24.92■■□□□ 1.58
CASC3-203ENST00000418132 LRP2BPQ9P2M1 347 aa24.92■■□□□ 1.58
CASC3-203ENST00000418132 SLX4Q8IY92 1834 aa24.92■■□□□ 1.58
CASC3-203ENST00000418132 ZBTB7AO95365 584 aa24.91■■□□□ 1.58
CASC3-203ENST00000418132 MPNDQ8N594 471 aa24.91■■□□□ 1.58
CASC3-203ENST00000418132 TMX4Q9H1E5 349 aaPredicted RBP24.91■■□□□ 1.58
CASC3-203ENST00000418132 R3HDM1Q15032 1099 aaKnown RBP24.91■■□□□ 1.58
CASC3-203ENST00000418132 U3KPZ7 1027 aaPredicted RBP24.91■■□□□ 1.58
CASC3-203ENST00000418132 C6orf229H3BNL8 230 aa24.9■■□□□ 1.58
CASC3-203ENST00000418132 CREB3L3Q68CJ9 461 aa24.9■■□□□ 1.58
CASC3-203ENST00000418132 OLFM4Q6UX06 510 aa24.9■■□□□ 1.58
CASC3-203ENST00000418132 MAGEB6Q8N7X4 407 aa24.9■■□□□ 1.58
CASC3-203ENST00000418132 HSPD1P10809 573 aaKnown RBP24.89■■□□□ 1.58
CASC3-203ENST00000418132 NBR1Q14596 966 aa24.89■■□□□ 1.58
CASC3-203ENST00000418132 VPS53Q5VIR6 699 aa24.89■■□□□ 1.58
CASC3-203ENST00000418132 ABCF2Q9UG63 623 aa24.89■■□□□ 1.58
CASC3-203ENST00000418132 DPP8Q6V1X1 898 aaPredicted RBP24.89■■□□□ 1.57
CASC3-203ENST00000418132 HSCBQ8IWL3 235 aa24.89■■□□□ 1.57
CASC3-203ENST00000418132 CD209Q9NNX6 404 aa24.89■■□□□ 1.57
CASC3-203ENST00000418132 SLC27A2O14975 620 aa24.88■■□□□ 1.57
CASC3-203ENST00000418132 GPAA1O43292 621 aa24.88■■□□□ 1.57
CASC3-203ENST00000418132 CD2BP2O95400 341 aaKnown RBP24.88■■□□□ 1.57
CASC3-203ENST00000418132 IL1R1P14778 569 aa24.88■■□□□ 1.57
CASC3-203ENST00000418132 RNF20Q5VTR2 975 aa24.88■■□□□ 1.57
CASC3-203ENST00000418132 IL27Q8NEV9 243 aa24.88■■□□□ 1.57
CASC3-203ENST00000418132 ZKSCAN1P17029 563 aaPredicted RBP24.87■■□□□ 1.57
CASC3-203ENST00000418132 C7orf43Q8WVR3 580 aa24.87■■□□□ 1.57
CASC3-203ENST00000418132 SALL1Q9NSC2 1324 aa24.87■■□□□ 1.57
CASC3-203ENST00000418132 ATF5Q9Y2D1 282 aaPredicted RBP24.87■■□□□ 1.57
CASC3-203ENST00000418132 POLD1P28340 1107 aa24.86■■□□□ 1.57
CASC3-203ENST00000418132 CHAF1AQ13111 956 aaPredicted RBP24.86■■□□□ 1.57
CASC3-203ENST00000418132 TSGA10IPQ3SY00 556 aa24.86■■□□□ 1.57
CASC3-203ENST00000418132 WDR66Q8TBY9 1149 aa24.86■■□□□ 1.57
CASC3-203ENST00000418132 RAI14Q9P0K7 980 aa24.86■■□□□ 1.57
CASC3-203ENST00000418132 FOXP2O15409 715 aa24.85■■□□□ 1.57
CASC3-203ENST00000418132 ST18O60284 1047 aa24.85■■□□□ 1.57
CASC3-203ENST00000418132 IGSF3O75054 1194 aa24.85■■□□□ 1.57
CASC3-203ENST00000418132 NEK4P51957 841 aa24.85■■□□□ 1.57
CASC3-203ENST00000418132 TMED8Q6PL24 325 aaPredicted RBP24.84■■□□□ 1.57
CASC3-203ENST00000418132 ZGPATQ8N5A5 531 aaKnown RBP24.84■■□□□ 1.57
CASC3-203ENST00000418132 TM6SF1Q9BZW5 370 aa24.84■■□□□ 1.57
CASC3-203ENST00000418132 SNED1Q8TER0 1413 aa24.84■■□□□ 1.57
CASC3-203ENST00000418132 MAST2Q6P0Q8 1798 aa24.84■■□□□ 1.57
CASC3-203ENST00000418132 KCNA3P22001 575 aa24.84■■□□□ 1.57
CASC3-203ENST00000418132 CC2D2BQ6DHV5 1058 aa24.84■■□□□ 1.57
CASC3-203ENST00000418132 AIDAQ96BJ3 306 aa24.84■■□□□ 1.57
CASC3-203ENST00000418132 STRBPQ96SI9 672 aaKnown RBP24.84■■□□□ 1.57
CASC3-203ENST00000418132 ZC3H12CQ9C0D7 883 aaKnown RBP24.84■■□□□ 1.57
CASC3-203ENST00000418132 COA1Q9GZY4 146 aa24.84■■□□□ 1.57
CASC3-203ENST00000418132 CYP7A1P22680 504 aa24.83■■□□□ 1.57
CASC3-203ENST00000418132 ZNF384Q8TF68 577 aa24.83■■□□□ 1.57
CASC3-203ENST00000418132 CYP21A2P08686 494 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 DPEP1P16444 411 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 ADCK5Q3MIX3 580 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 SPTY2D1Q68D10 685 aaPredicted RBP24.82■■□□□ 1.56
CASC3-203ENST00000418132 TTLL6Q8N841 843 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 NSUN4Q96CB9 384 aaKnown RBP24.82■■□□□ 1.56
CASC3-203ENST00000418132 EYA3Q99504 573 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 RTFDC1Q9BY42 306 aaPredicted RBP24.82■■□□□ 1.56
CASC3-203ENST00000418132 UPF3BQ9BZI7 483 aaKnown RBP24.82■■□□□ 1.56
CASC3-203ENST00000418132 KIAA1551Q9HCM1 1747 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 CCDC88AQ3V6T2 1871 aa24.82■■□□□ 1.56
CASC3-203ENST00000418132 RPAP1Q9BWH6 1393 aaPredicted RBP24.82■■□□□ 1.56
CASC3-203ENST00000418132 K7ELQ4 463 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms