RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CSF1RP07333 972 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CHRNDQ07001 517 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 GCKRQ14397 625 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 C15orf52Q6ZUT6 534 aaKnown RBP10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ZNF804AQ7Z570 1209 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 EFCC1Q9HA90 598 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ECM29Q5VYK3 1845 aa10.05□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ANKRD18BA2A2Z9 1011 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 USP2O75604 605 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 RBM5P52756 815 aaKnown RBP eCLIP10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 FKBP1AP62942 108 aaKnown RBP10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 SP3Q02447 781 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CRHR2Q13324 411 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ARHGEF6Q15052 776 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CFAP100Q494V2 611 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 NBPF12Q5TAG4 269 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 PRMT6Q96LA8 375 aaPredicted RBP10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 VEZTQ9HBM0 779 aa10.04□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CLRN2A0PK11 232 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 TESPA1A2RU30 521 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 F8W031 263 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 TAF5LO75529 589 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 IL1R1P14778 569 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 IFIT5Q13325 482 aaKnown RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 RASA3Q14644 834 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 TWISTNBQ3B726 338 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 G2E3Q7L622 706 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 LINS1Q8NG48 757 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 TSR2Q969E8 191 aaKnown RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 ARMC5Q96C12 935 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 TMEM106CQ9BVX2 250 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 PRKRIP1Q9H875 184 aaPredicted RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 LAMB1P07942 1786 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 CACNA1FO60840 1977 aa10.03□□□□□ -0.8
HLA-DPA1-241ENST00000417724 SNAP23O00161 211 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 EN2P19622 333 aaPredicted RBP10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CASP7P55210 303 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 FLIIQ13045 1269 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 FKBP5Q13451 457 aaPredicted RBP10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 NBPF11Q86T75 865 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 DNAAF4Q8WXU2 420 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 PTPN18Q99952 460 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 PCDHAC2Q9Y5I4 1007 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 IRS2Q9Y4H2 1338 aa10.02□□□□□ -0.81
HLA-DPA1-241ENST00000417724 SSC5DA1L4H1 1573 aa10.01□□□□□ -0.81
HLA-DPA1-241ENST00000417724 WDHD1O75717 1129 aaPredicted RBP10.01□□□□□ -0.81
HLA-DPA1-241ENST00000417724 GJA5P36382 358 aa10.01□□□□□ -0.81
HLA-DPA1-241ENST00000417724 OPTNQ96CV9 577 aa10.01□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CHMP3Q9Y3E7 222 aa10.01□□□□□ -0.81
HLA-DPA1-241ENST00000417724 PLIN1O60240 522 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 FOXO4P98177 505 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CCDC27Q2M243 656 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CCDC57Q2TAC2 916 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 SLC9C1Q4G0N8 1177 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 LDHAL6AQ6ZMR3 332 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 ELP3Q9H9T3 547 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 ZFYVE28Q9HCC9 887 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 ZNF70Q9UC06 446 aaPredicted RBP10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 FAM205AQ6ZU69 1335 aa10□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CCL15-CCL14A0A0B4J2E2 113 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TNNI2P48788 182 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 GTF2A2P52657 109 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TAF1CQ15572 869 aaPredicted RBP9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CCL15Q16663 113 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 SLC4A8Q2Y0W8 1093 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 SPDYE2Q495Y8 402 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TAF7LQ5H9L4 462 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 MFSD14BQ5SR56 506 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 LMBR1LQ6UX01 489 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 ZNF333Q96JL9 665 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TDRD3Q9H7E2 651 aaKnown RBP9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CNNM1Q9NRU3 951 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 JAG2Q9Y219 1238 aa9.99□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CEP290O15078 2479 aa9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 FXR1P51114 621 aaKnown RBP eCLIP9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 KIF22Q14807 665 aa9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TDRD7Q8NHU6 1098 aaKnown RBP9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 BRI3BPQ8WY22 251 aa9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 CSADQ9Y600 493 aa9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 AOX1Q06278 1338 aa9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 IL16Q14005 1332 aa9.98□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TCP10L2B9ZVM9 353 aa9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 HIBADHP31937 336 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms