RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 MMP14P50281 582 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 EIF5P55010 431 aaKnown RBP3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 KRT72Q14CN4 511 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 TOMM20Q15388 145 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 DDR2Q16832 855 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 NBPF9Q3BBW0 867 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 OXLD1Q5BKU9 147 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 WDR45BQ5MNZ6 344 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 PERM1Q5SV97 790 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 C1QTNF12Q5T7M4 302 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 JAKMIP3Q5VZ66 844 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 KANK3Q6NY19 840 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 ANKRD13DQ6ZTN6 518 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 NECAB2Q7Z6G3 386 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 MORC1Q86VD1 984 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 THNSL2Q86YJ6 484 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 NIM1KQ8IY84 436 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 MAGEB6Q8N7X4 407 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 PJA1Q8NG27 643 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 NINJ1Q92982 152 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 CCDC47Q96A33 483 aaKnown RBP3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 TRIM52Q96A61 297 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 EMID1Q96A84 441 aaPredicted RBP3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 CHMP4CQ96CF2 233 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 CDHR1Q96JP9 859 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 C9orf78Q9NZ63 289 aaPredicted RBP3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 PGAP2Q9UHJ9 254 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 LHX6Q9UPM6 363 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 CD2APQ9Y5K6 639 aa3.78□□□□□ -1.8
CTDSPL-203ENST00000416688 SYNRGQ9UMZ2 1314 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 ANO9A1A5B4 782 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 C9IYK1 514 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 VAMP4O75379 141 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 RFPL1O75677 317 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 SRGNP10124 158 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 EPB42P16452 691 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 PCSK2P16519 638 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 FLT3P36888 993 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 ANP32AP39687 249 aaKnown RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 DGKGP49619 791 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 CLK1P49759 484 aaKnown RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 BCAMP50895 628 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 ITKQ08881 620 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 USP4Q13107 963 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 TBX2Q13207 712 aaPredicted RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 SEPT2Q15019 361 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 IL31Q6EBC2 164 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 CXorf57Q6NSI4 855 aaKnown RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 CFAP161Q6P656 301 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 LYPD8Q6UX82 237 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 MAATS1Q7Z4T9 603 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 UBE2Q1Q7Z7E8 422 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 ZBTB46Q86UZ6 589 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 RETREG3Q86VR2 466 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 RASSF3Q86WH2 238 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 RELL1Q8IUW5 271 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 KIAA1958Q8N8K9 716 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 JMYQ8N9B5 988 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 TSEN2Q8NCE0 465 aaKnown RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 TTC16Q8NEE8 873 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 ZSWIM2Q8NEG5 633 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 GAS2L2Q8NHY3 880 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 FRS2Q8WU20 508 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 GPKOWQ92917 476 aaPredicted RBP eCLIP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 TRIM63Q969Q1 353 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 TRMT2BQ96GJ1 504 aaKnown RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 TBATAQ96M53 351 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 NUDT12Q9BQG2 462 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 SARGQ9BW04 601 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 ASPSCR1Q9BZE9 553 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 SRCIN1Q9C0H9 1055 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 RIC8AQ9NPQ8 531 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 PLCB1Q9NQ66 1216 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 GINM1Q9NU53 330 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 KBTBD4Q9NVX7 518 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 FAM8A1Q9UBU6 413 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 ZNF180Q9UJW8 692 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 MAPRE3Q9UPY8 281 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 DIS3Q9Y2L1 958 aaKnown RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 LUC7L2Q9Y383 392 aaKnown RBP3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 SPEF1Q9Y4P9 236 aa3.77□□□□□ -1.81
CTDSPL-203ENST00000416688 KDM2BQ8NHM5 1336 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 ESPNB1AK53 854 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 PDE8AO60658 829 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 LGR5O75473 907 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 APPP05067 770 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 POU3F3P20264 500 aaPredicted RBP3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 NEK3P51956 506 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 WASHC5Q12768 1159 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 CHAF1AQ13111 956 aaPredicted RBP3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 FXNQ16595 210 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 AKAP4Q5JQC9 854 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 DACT2Q5SW24 774 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 MZT2BQ6NZ67 158 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 PDXDC2PQ6P474 469 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 MZT2AQ6P582 158 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 RSRC2Q7L4I2 434 aaKnown RBP3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 TRIM22Q8IYM9 498 aa3.76□□□□□ -1.81
CTDSPL-203ENST00000416688 GJD3Q8N144 294 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms