RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 ANKRD2Q9GZV1 360 aa8.15□□□□□ -1.1
LMBR1-204ENST00000415428 ASTN2O75129 1339 aaPredicted RBP8.15□□□□□ -1.1
LMBR1-204ENST00000415428 LMOD3Q0VAK6 560 aa8.15□□□□□ -1.1
LMBR1-204ENST00000415428 CELF1Q92879 486 aaKnown RBP8.15□□□□□ -1.1
LMBR1-204ENST00000415428 PTCH2Q9Y6C5 1203 aa8.15□□□□□ -1.1
LMBR1-204ENST00000415428 PRKAR2BP31323 418 aa8.15□□□□□ -1.11
LMBR1-204ENST00000415428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.15□□□□□ -1.11
LMBR1-204ENST00000415428 NUTM1Q86Y26 1132 aa8.15□□□□□ -1.11
LMBR1-204ENST00000415428 GUCD1Q96NT3 240 aa8.15□□□□□ -1.11
LMBR1-204ENST00000415428 NR2E3Q9Y5X4 410 aa8.15□□□□□ -1.11
LMBR1-204ENST00000415428 H7C1W4 665 aa8.14□□□□□ -1.11
LMBR1-204ENST00000415428 RAD17O75943 681 aa8.14□□□□□ -1.11
LMBR1-204ENST00000415428 CETPP11597 493 aa8.14□□□□□ -1.11
LMBR1-204ENST00000415428 IREB2P48200 963 aaKnown RBP8.14□□□□□ -1.11
LMBR1-204ENST00000415428 AKNAD1Q5T1N1 836 aa8.14□□□□□ -1.11
LMBR1-204ENST00000415428 TMEM106CQ9BVX2 250 aa8.14□□□□□ -1.11
LMBR1-204ENST00000415428 GPAT2Q6NUI2 795 aa8.14□□□□□ -1.11
LMBR1-204ENST00000415428 SLC51AQ86UW1 340 aa8.14□□□□□ -1.11
LMBR1-204ENST00000415428 CXCL11O14625 94 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 HOXD10P28358 340 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 CTGFP29279 349 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 PPP2R1AP30153 589 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 TBC1D10BQ4KMP7 808 aaPredicted RBP8.13□□□□□ -1.11
LMBR1-204ENST00000415428 CD99L2Q8TCZ2 262 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 SNCAIPQ9Y6H5 919 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 XRCC5P13010 732 aaKnown RBP8.13□□□□□ -1.11
LMBR1-204ENST00000415428 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
LMBR1-204ENST00000415428 TRIM47Q96LD4 638 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 MORF4L1Q9UBU8 362 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 NUDCQ9Y266 331 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 TRIM17Q9Y577 477 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 IRF6O14896 467 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 RASIP1Q5U651 963 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 METTL16Q86W50 562 aaKnown RBP8.13□□□□□ -1.11
LMBR1-204ENST00000415428 CFAP53Q96M91 514 aa8.13□□□□□ -1.11
LMBR1-204ENST00000415428 TBC1D12O60347 775 aa8.12□□□□□ -1.11
LMBR1-204ENST00000415428 CCDC152Q4G0S7 254 aa8.12□□□□□ -1.11
LMBR1-204ENST00000415428 SH3D19Q5HYK7 790 aa8.12□□□□□ -1.11
LMBR1-204ENST00000415428 ZNF219Q9P2Y4 722 aaPredicted RBP8.12□□□□□ -1.11
LMBR1-204ENST00000415428 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
LMBR1-204ENST00000415428 PRRT2Q7Z6L0 340 aaPredicted RBP8.12□□□□□ -1.11
LMBR1-204ENST00000415428 TDHQ8IZJ6 230 aa8.12□□□□□ -1.11
LMBR1-204ENST00000415428 GBF1Q92538 1859 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 NEUROD1Q13562 356 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 TNFAIP1Q13829 316 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 ERO1BQ86YB8 467 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 MINPP1Q9UNW1 487 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 HMOX1P09601 288 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 RALGAPA2Q2PPJ7 1873 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 LBX2Q6XYB7 198 aa8.11□□□□□ -1.11
LMBR1-204ENST00000415428 TDRD7Q8NHU6 1098 aaKnown RBP8.11□□□□□ -1.11
LMBR1-204ENST00000415428 GTF3C2Q8WUA4 911 aaPredicted RBP8.11□□□□□ -1.11
LMBR1-204ENST00000415428 DBF4Q9UBU7 674 aaPredicted RBP8.11□□□□□ -1.11
LMBR1-204ENST00000415428 UBE2Q2LH0YL09 131 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 CCDC27Q2M243 656 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 KCNQ5Q9NR82 932 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 MAP3K9P80192 1104 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 SLC17A8Q8NDX2 589 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 METTL22Q9BUU2 404 aaPredicted RBP8.1□□□□□ -1.11
LMBR1-204ENST00000415428 IL16Q14005 1332 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 PPM1GO15355 546 aaPredicted RBP8.1□□□□□ -1.11
LMBR1-204ENST00000415428 CCL5P13501 91 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 CTSWP56202 376 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
LMBR1-204ENST00000415428 ZC3H12CQ9C0D7 883 aaKnown RBP8.1□□□□□ -1.11
LMBR1-204ENST00000415428 NAV1Q8NEY1 1877 aa8.1□□□□□ -1.11
LMBR1-204ENST00000415428 NBPF9Q3BBW0 867 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 COPS6Q7L5N1 327 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 RTF1Q92541 710 aaKnown RBP8.09□□□□□ -1.11
LMBR1-204ENST00000415428 ZDHHC15Q96MV8 337 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 NRBP1Q9UHY1 535 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 CERS5Q8N5B7 392 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 DEFB129Q9H1M3 183 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
LMBR1-204ENST00000415428 SLC9C1Q4G0N8 1177 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 HHIPL2Q6UWX4 724 aa8.09□□□□□ -1.11
LMBR1-204ENST00000415428 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.09□□□□□ -1.11
LMBR1-204ENST00000415428 ATXN2LQ8WWM7 1075 aaKnown RBP8.09□□□□□ -1.11
LMBR1-204ENST00000415428 PPP1R12BO60237 982 aaPredicted RBP8.08□□□□□ -1.12
LMBR1-204ENST00000415428 UBXN2AP68543 259 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 CHRDL2Q6WN34 429 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 TTLL11Q8NHH1 800 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 SLC10A4Q96EP9 437 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 CDC5LQ99459 802 aaKnown RBP8.08□□□□□ -1.12
LMBR1-204ENST00000415428 OSBPP22059 807 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 SNAPC2Q13487 334 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 PROSER3Q2NL68 480 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 GJD2Q9UKL4 321 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 DBNDD1Q9H9R9 158 aa8.08□□□□□ -1.12
LMBR1-204ENST00000415428 IRS4O14654 1257 aaPredicted RBP8.07□□□□□ -1.12
LMBR1-204ENST00000415428 RGS20O76081 388 aa8.07□□□□□ -1.12
LMBR1-204ENST00000415428 NPM2Q86SE8 214 aaKnown RBP8.07□□□□□ -1.12
LMBR1-204ENST00000415428 FAM163AQ96GL9 167 aaPredicted RBP8.07□□□□□ -1.12
LMBR1-204ENST00000415428 PLXNA1Q9UIW2 1896 aa8.07□□□□□ -1.12
LMBR1-204ENST00000415428 GRK4P32298 578 aa8.07□□□□□ -1.12
LMBR1-204ENST00000415428 OPTNQ96CV9 577 aa8.07□□□□□ -1.12
LMBR1-204ENST00000415428 HTTP42858 3142 aa8.07□□□□□ -1.12
LMBR1-204ENST00000415428 PHF20L1A8MW92 1017 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms