RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 RFX7Q2KHR2 1363 aa11.73□□□□□ -0.53
RIF1-202ENST00000414861 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
RIF1-202ENST00000414861 CHAF1AQ13111 956 aaPredicted RBP11.73□□□□□ -0.53
RIF1-202ENST00000414861 NMIQ13287 307 aaPredicted RBP11.73□□□□□ -0.53
RIF1-202ENST00000414861 CC2D2BQ6DHV5 1058 aa11.73□□□□□ -0.53
RIF1-202ENST00000414861 CWC27Q6UX04 472 aaKnown RBP11.73□□□□□ -0.53
RIF1-202ENST00000414861 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
RIF1-202ENST00000414861 ESYT1Q9BSJ8 1104 aa11.73□□□□□ -0.53
RIF1-202ENST00000414861 DIAPH3Q9NSV4 1193 aa11.73□□□□□ -0.53
RIF1-202ENST00000414861 COL4A5P29400 1685 aa11.72□□□□□ -0.53
RIF1-202ENST00000414861 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
RIF1-202ENST00000414861 SOCS7O14512 581 aa11.72□□□□□ -0.53
RIF1-202ENST00000414861 FRAT2O75474 233 aaPredicted RBP11.72□□□□□ -0.53
RIF1-202ENST00000414861 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
RIF1-202ENST00000414861 DENND2AQ9ULE3 1009 aa11.72□□□□□ -0.53
RIF1-202ENST00000414861 BCS1LQ9Y276 419 aa11.72□□□□□ -0.53
RIF1-202ENST00000414861 SEMA3EO15041 775 aa11.71□□□□□ -0.53
RIF1-202ENST00000414861 IDH1O75874 414 aaKnown RBP11.71□□□□□ -0.53
RIF1-202ENST00000414861 IL1R1P14778 569 aa11.71□□□□□ -0.53
RIF1-202ENST00000414861 CASC1Q6TDU7 716 aa11.71□□□□□ -0.53
RIF1-202ENST00000414861 PDS5AQ29RF7 1337 aaKnown RBP11.71□□□□□ -0.53
RIF1-202ENST00000414861 AOC3Q16853 763 aa11.71□□□□□ -0.53
RIF1-202ENST00000414861 DOK7Q18PE1 504 aa11.71□□□□□ -0.53
RIF1-202ENST00000414861 SEC62Q99442 399 aaKnown RBP11.71□□□□□ -0.53
RIF1-202ENST00000414861 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.53
RIF1-202ENST00000414861 CCDC88AQ3V6T2 1871 aa11.71□□□□□ -0.54
RIF1-202ENST00000414861 SGSM2O43147 1006 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 TTF1Q15361 905 aaPredicted RBP11.7□□□□□ -0.54
RIF1-202ENST00000414861 EYA3Q99504 573 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 DBNDD1Q9H9R9 158 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 MAST2Q6P0Q8 1798 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 ZBTB22O15209 634 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 ZNF589Q86UQ0 364 aaPredicted RBP11.7□□□□□ -0.54
RIF1-202ENST00000414861 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 PSMD1Q99460 953 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 ABCF2Q9UG63 623 aa11.7□□□□□ -0.54
RIF1-202ENST00000414861 HIP1O00291 1037 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 RNF113AO15541 343 aaKnown RBP11.69□□□□□ -0.54
RIF1-202ENST00000414861 PDE6AP16499 860 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 KIAA2012Q0VF49 1180 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 ZNF277Q9NRM2 450 aaPredicted RBP11.69□□□□□ -0.54
RIF1-202ENST00000414861 PSME4Q14997 1843 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 NFKBIEO00221 500 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 PRDX5P30044 214 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 ADD2P35612 726 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 GRIK5Q16478 980 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 ZMYM1Q5SVZ6 1142 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 SLC9C2Q5TAH2 1124 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 SOGA3Q5TF21 947 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 CCDC129Q6ZRS4 1044 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 ZNF384Q8TF68 577 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 MAST3O60307 1309 aa11.69□□□□□ -0.54
RIF1-202ENST00000414861 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 M0R2C6 588 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 PPIP5K2O43314 1243 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 KCNQ5Q9NR82 932 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 LRP2BPQ9P2M1 347 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 ECE2O60344 883 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 MAGEB6Q8N7X4 407 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 SUPT20HQ8NEM7 779 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■■□□ 19
RIF1-202ENST00000414861 ANO2Q9NQ90 1003 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 RAD50Q92878 1312 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 ZNF532Q9HCE3 1301 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 MYH2Q9UKX2 1941 aa11.68□□□□□ -0.54
RIF1-202ENST00000414861 GTF2IP78347 998 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 RUFY2Q8WXA3 655 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 FAM205AQ6ZU69 1335 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 YDJCA8MPS7 323 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 ZFYP08048 801 aaPredicted RBP11.67□□□□□ -0.54
RIF1-202ENST00000414861 RASSF7Q02833 373 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 ADGRA1Q86SQ6 560 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 WDR66Q8TBY9 1149 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 APPBP2Q92624 585 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 PUS7LQ9H0K6 701 aaKnown RBP11.67□□□□□ -0.54
RIF1-202ENST00000414861 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 RAI14Q9P0K7 980 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 ADAMTSL1Q8N6G6 1762 aa11.67□□□□□ -0.54
RIF1-202ENST00000414861 REC8O95072 547 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 PTH1RQ03431 593 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 MCMDC2Q4G0Z9 681 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 MFSD14BQ5SR56 506 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 TICAM2Q86XR7 235 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 USP26Q9BXU7 913 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 LSG1Q9H089 658 aaKnown RBP11.66□□□□□ -0.54
RIF1-202ENST00000414861 G3V3G9 751 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 PRELPP51888 382 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 MECOMQ03112 1051 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
RIF1-202ENST00000414861 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms