RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ZNF646O15015 1829 aaPredicted RBP17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 LAMA3Q16787 3333 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 MYO1BO43795 1136 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 GTF2A2P52657 109 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 LACTBP83111 547 aaPredicted RBP17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 KIAA0825Q8IV33 1275 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 DEFB123Q8N688 67 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 MTMR14Q8NCE2 650 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 BRI3BPQ8WY22 251 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 OPTNQ96CV9 577 aa17.37■□□□□ 0.37
RAPGEF1-204ENST00000414781 CCL15-CCL14A0A0B4J2E2 113 aa17.36■□□□□ 0.37
RAPGEF1-204ENST00000414781 CAPN2P17655 700 aa17.36■□□□□ 0.37
RAPGEF1-204ENST00000414781 MTFR1Q15390 333 aa17.36■□□□□ 0.37
RAPGEF1-204ENST00000414781 CCL15Q16663 113 aa17.36■□□□□ 0.37
RAPGEF1-204ENST00000414781 TTLL5Q6EMB2 1281 aa17.36■□□□□ 0.37
RAPGEF1-204ENST00000414781 PLEKHF1Q96S99 279 aa17.36■□□□□ 0.37
RAPGEF1-204ENST00000414781 ZCCHC17Q9NP64 241 aaKnown RBP17.36■□□□□ 0.37
RAPGEF1-204ENST00000414781 EVI5O60447 810 aa17.35■□□□□ 0.37
RAPGEF1-204ENST00000414781 TLR2O60603 784 aa17.35■□□□□ 0.37
RAPGEF1-204ENST00000414781 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
RAPGEF1-204ENST00000414781 FARP2O94887 1054 aaPredicted RBP17.35■□□□□ 0.37
RAPGEF1-204ENST00000414781 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
RAPGEF1-204ENST00000414781 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
RAPGEF1-204ENST00000414781 ELP3Q9H9T3 547 aa17.35■□□□□ 0.37
RAPGEF1-204ENST00000414781 PDE8AO60658 829 aa17.34■□□□□ 0.37
RAPGEF1-204ENST00000414781 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
RAPGEF1-204ENST00000414781 HELBQ8NG08 1087 aaPredicted RBP17.34■□□□□ 0.37
RAPGEF1-204ENST00000414781 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
RAPGEF1-204ENST00000414781 APAF1O14727 1248 aa17.33■□□□□ 0.36
RAPGEF1-204ENST00000414781 HOXD10P28358 340 aa17.33■□□□□ 0.36
RAPGEF1-204ENST00000414781 NBPF12Q5TAG4 269 aaPredicted RBP17.33■□□□□ 0.36
RAPGEF1-204ENST00000414781 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.33■□□□□ 0.36
RAPGEF1-204ENST00000414781 ARHGAP39Q9C0H5 1083 aa17.33■□□□□ 0.36
RAPGEF1-204ENST00000414781 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.36
RAPGEF1-204ENST00000414781 CCL5P13501 91 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 GRK4P32298 578 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 BMP8BP34820 402 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 UBXN2AP68543 259 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 FAM43AQ8N2R8 423 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 RNF208Q9H0X6 261 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 BSDC1Q9NW68 430 aaPredicted RBP17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 STAP2Q9UGK3 403 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
RAPGEF1-204ENST00000414781 LMOD3Q0VAK6 560 aa17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 RAET1EQ8TD07 263 aa17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 TRIM47Q96LD4 638 aa17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 HYPKQ9NX55 129 aa17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 MTMR10Q9NXD2 777 aa17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 LEMD3Q9Y2U8 911 aa17.31■□□□□ 0.36
RAPGEF1-204ENST00000414781 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 PCCAP05165 728 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 HOXB7P09629 217 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 GTF2IP78347 998 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 TNFAIP1Q13829 316 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 LRIT3Q3SXY7 679 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 U2AF1L4Q8WU68 220 aaKnown RBP17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
RAPGEF1-204ENST00000414781 CLRN2A0PK11 232 aa17.29■□□□□ 0.36
RAPGEF1-204ENST00000414781 CETPP11597 493 aa17.29■□□□□ 0.36
RAPGEF1-204ENST00000414781 TMPOP42166 694 aaKnown RBP17.29■□□□□ 0.36
RAPGEF1-204ENST00000414781 RASA3Q14644 834 aa17.29■□□□□ 0.36
RAPGEF1-204ENST00000414781 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
RAPGEF1-204ENST00000414781 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
RAPGEF1-204ENST00000414781 CSADQ9Y600 493 aa17.29■□□□□ 0.36
RAPGEF1-204ENST00000414781 UNC80Q8N2C7 3258 aa17.28■□□□□ 0.36
RAPGEF1-204ENST00000414781 RIPK4P57078 832 aa17.28■□□□□ 0.36
RAPGEF1-204ENST00000414781 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
RAPGEF1-204ENST00000414781 Q7L0L9 218 aa17.28■□□□□ 0.36
RAPGEF1-204ENST00000414781 GDF15Q99988 308 aa17.28■□□□□ 0.36
RAPGEF1-204ENST00000414781 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
RAPGEF1-204ENST00000414781 BIN2Q9UBW5 565 aaPredicted RBP17.28■□□□□ 0.36
RAPGEF1-204ENST00000414781 PSMC4P43686 418 aa17.27■□□□□ 0.36
RAPGEF1-204ENST00000414781 GOLGA2Q08379 1002 aa17.27■□□□□ 0.36
RAPGEF1-204ENST00000414781 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
RAPGEF1-204ENST00000414781 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.27■□□□□ 0.36
RAPGEF1-204ENST00000414781 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
RAPGEF1-204ENST00000414781 SGPL1O95470 568 aa17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 OSBPP22059 807 aa17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 VGLL4Q14135 290 aa17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 SLAIN1Q8ND83 568 aa17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 CWC25Q9NXE8 425 aaPredicted RBP17.26■□□□□ 0.35
RAPGEF1-204ENST00000414781 ZBED9Q6R2W3 1325 aa17.25■□□□□ 0.35
RAPGEF1-204ENST00000414781 MYPNQ86TC9 1320 aa17.25■□□□□ 0.35
RAPGEF1-204ENST00000414781 SPDYE5A6NIY4 337 aa17.25■□□□□ 0.35
RAPGEF1-204ENST00000414781 CTSWP56202 376 aa17.25■□□□□ 0.35
RAPGEF1-204ENST00000414781 C17orf99Q6UX52 265 aa17.25■□□□□ 0.35
RAPGEF1-204ENST00000414781 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
RAPGEF1-204ENST00000414781 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms