RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 DBNLQ9UJU6 430 aaKnown RBP12.8□□□□□ -0.36
HLA-DMB-257ENST00000414017 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
HLA-DMB-257ENST00000414017 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
HLA-DMB-257ENST00000414017 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMB-257ENST00000414017 IL1R1P14778 569 aa12.79□□□□□ -0.36
HLA-DMB-257ENST00000414017 GMPSP49915 693 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMB-257ENST00000414017 GPC2Q8N158 579 aa12.79□□□□□ -0.36
HLA-DMB-257ENST00000414017 TDRD7Q8NHU6 1098 aaKnown RBP12.79□□□□□ -0.36
HLA-DMB-257ENST00000414017 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
HLA-DMB-257ENST00000414017 SNRKQ9NRH2 765 aa12.79□□□□□ -0.36
HLA-DMB-257ENST00000414017 LMOD1P29536 600 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-257ENST00000414017 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
HLA-DMB-257ENST00000414017 RSBN1LQ6PCB5 846 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-257ENST00000414017 C16orf71Q8IYS4 520 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-257ENST00000414017 RRAGCQ9HB90 399 aa12.78□□□□□ -0.36
HLA-DMB-257ENST00000414017 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-257ENST00000414017 SCN9AQ15858 1988 aa12.78□□□□□ -0.36
HLA-DMB-257ENST00000414017 ARAP2Q8WZ64 1704 aa12.77□□□□□ -0.36
HLA-DMB-257ENST00000414017 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 RASGRF1Q13972 1273 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 MFSD14BQ5SR56 506 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 DACT2Q5SW24 774 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 TSHZ3Q63HK5 1081 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 PI16Q6UXB8 463 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.37
HLA-DMB-257ENST00000414017 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 VIL1P09327 827 aaKnown RBP12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 MCAMP43121 646 aa12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 SCARF1Q14162 830 aa12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 ABCF2Q9UG63 623 aa12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
HLA-DMB-257ENST00000414017 H7C1D1 291 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 COL1A1P02452 1464 aaPredicted RBP12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 ARID4AP29374 1257 aaPredicted RBP12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 EPS15P42566 896 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 EAPPQ56P03 285 aaPredicted RBP12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 CHD1LQ86WJ1 897 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 SPATA5Q8NB90 893 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 WDR66Q8TBY9 1149 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 BOLA2Q9H3K6 86 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 HMG20BQ9P0W2 317 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 CNOT7Q9UIV1 285 aaKnown RBP12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 HACL1Q9UJ83 578 aa12.75□□□□□ -0.37
HLA-DMB-257ENST00000414017 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 FAM205AQ6ZU69 1335 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 MYO3BQ8WXR4 1341 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 SEMA3EO15041 775 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 RPS12P25398 132 aaKnown RBP12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 ZAP70P43403 619 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 SCNN1DP51172 638 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 NUCB1Q02818 461 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 TBC1D10BQ4KMP7 808 aaPredicted RBP12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 TBC1D9Q6ZT07 1266 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 AGBL3Q8NEM8 1001 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 TBC1D22AQ8WUA7 517 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 HDAC9Q9UKV0 1011 aa12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 TTF2Q9UNY4 1162 aaKnown RBP12.74□□□□□ -0.37
HLA-DMB-257ENST00000414017 IQCA1LA6NCM1 817 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 USP17L8P0C7I0 530 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 MX1P20591 662 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 GRIK5Q16478 980 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 SAMD7Q7Z3H4 446 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 ECHDC1Q9NTX5 307 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
HLA-DMB-257ENST00000414017 GOLIM4O00461 696 aa12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 LDHBP07195 334 aaKnown RBP12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 PRDX5P30044 214 aa12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 EPHX2P34913 555 aa12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 ERICH6BQ5W0A0 696 aa12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 ERICH6Q7L0X2 663 aa12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 DZIP1Q86YF9 867 aaKnown RBP12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 ZGPATQ8N5A5 531 aaKnown RBP12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 DPF2Q92785 391 aa12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
HLA-DMB-257ENST00000414017 POTECB2RU33 542 aa12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 ERC2O15083 957 aa12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 IDH1O75874 414 aaKnown RBP12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 ATP5JP18859 108 aa12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 SPTY2D1Q68D10 685 aaPredicted RBP12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 EDC3Q96F86 508 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms