RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FOXO4P98177 505 aa15.54■□□□□ 0.08
LIMS2-210ENST00000413578 HTTP42858 3142 aa15.54■□□□□ 0.08
LIMS2-210ENST00000413578 AOX1Q06278 1338 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 ANKRD18BA2A2Z9 1011 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 SPDYE2BA6NHP3 402 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 MANSC4A6NHS7 340 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-210ENST00000413578 UNCXA6NJT0 531 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 VAMP4O75379 141 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 TAF5LO75529 589 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 SPDYE6P0CI01 402 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 ZBTB48P10074 688 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-210ENST00000413578 KCNJ4P48050 445 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 INHBEP58166 350 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 FKBP5Q13451 457 aaPredicted RBP15.53■□□□□ 0.08
LIMS2-210ENST00000413578 DLGAP5Q15398 846 aa15.53■□□□□ 0.08
LIMS2-210ENST00000413578 IGF2BP3O00425 579 aaKnown RBP eCLIP15.52■□□□□ 0.08
LIMS2-210ENST00000413578 BEND3Q5T5X7 828 aa15.52■□□□□ 0.08
LIMS2-210ENST00000413578 IFNL1Q8IU54 200 aa15.52■□□□□ 0.08
LIMS2-210ENST00000413578 HELBQ8NG08 1087 aaPredicted RBP15.52■□□□□ 0.08
LIMS2-210ENST00000413578 WNK4Q96J92 1243 aa15.52■□□□□ 0.08
LIMS2-210ENST00000413578 CLMNQ96JQ2 1002 aa15.52■□□□□ 0.08
LIMS2-210ENST00000413578 IFIT5Q13325 482 aaKnown RBP15.51■□□□□ 0.07
LIMS2-210ENST00000413578 CFAP100Q494V2 611 aa15.51■□□□□ 0.07
LIMS2-210ENST00000413578 EPHA10Q5JZY3 1008 aa15.51■□□□□ 0.07
LIMS2-210ENST00000413578 ZNF804AQ7Z570 1209 aa15.51■□□□□ 0.07
LIMS2-210ENST00000413578 SLC10A4Q96EP9 437 aa15.51■□□□□ 0.07
LIMS2-210ENST00000413578 PRMT6Q96LA8 375 aaPredicted RBP15.51■□□□□ 0.07
LIMS2-210ENST00000413578 PPP1R12BO60237 982 aaPredicted RBP15.5■□□□□ 0.07
LIMS2-210ENST00000413578 GJA5P36382 358 aa15.5■□□□□ 0.07
LIMS2-210ENST00000413578 FAM205AQ6ZU69 1335 aa15.49■□□□□ 0.07
LIMS2-210ENST00000413578 CLRN2A0PK11 232 aa15.49■□□□□ 0.07
LIMS2-210ENST00000413578 TESPA1A2RU30 521 aaPredicted RBP15.49■□□□□ 0.07
LIMS2-210ENST00000413578 F6X3S4 739 aa15.49■□□□□ 0.07
LIMS2-210ENST00000413578 USP2O75604 605 aaPredicted RBP15.49■□□□□ 0.07
LIMS2-210ENST00000413578 NBPF12Q5TAG4 269 aaPredicted RBP15.49■□□□□ 0.07
LIMS2-210ENST00000413578 OTOP1Q7RTM1 612 aa15.49■□□□□ 0.07
LIMS2-210ENST00000413578 LAMB1P07942 1786 aa15.49■□□□□ 0.07
LIMS2-210ENST00000413578 F8W031 263 aaPredicted RBP15.48■□□□□ 0.07
LIMS2-210ENST00000413578 SUPT20HL1Q3ZLR7 823 aa15.48■□□□□ 0.07
LIMS2-210ENST00000413578 LMBR1LQ6UX01 489 aa15.48■□□□□ 0.07
LIMS2-210ENST00000413578 PTPN18Q99952 460 aa15.48■□□□□ 0.07
LIMS2-210ENST00000413578 A0A1B0GUL6 1792 aa15.48■□□□□ 0.07
LIMS2-210ENST00000413578 MYO1BO43795 1136 aa15.47■□□□□ 0.07
LIMS2-210ENST00000413578 RASA3Q14644 834 aa15.47■□□□□ 0.07
LIMS2-210ENST00000413578 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
LIMS2-210ENST00000413578 WDR63Q8IWG1 891 aa15.47■□□□□ 0.07
LIMS2-210ENST00000413578 TDRD7Q8NHU6 1098 aaKnown RBP15.47■□□□□ 0.07
LIMS2-210ENST00000413578 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-210ENST00000413578 VEZTQ9HBM0 779 aa15.47■□□□□ 0.07
LIMS2-210ENST00000413578 JAG2Q9Y219 1238 aa15.47■□□□□ 0.07
LIMS2-210ENST00000413578 TRIM17Q9Y577 477 aa15.47■□□□□ 0.07
LIMS2-210ENST00000413578 GRM8O00222 908 aa15.46■□□□□ 0.07
LIMS2-210ENST00000413578 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
LIMS2-210ENST00000413578 CAP1Q01518 475 aa15.46■□□□□ 0.07
LIMS2-210ENST00000413578 EXOSC9Q06265 439 aaKnown RBP15.46■□□□□ 0.07
LIMS2-210ENST00000413578 CRHR2Q13324 411 aa15.46■□□□□ 0.07
LIMS2-210ENST00000413578 LDHAL6AQ6ZMR3 332 aa15.46■□□□□ 0.07
LIMS2-210ENST00000413578 TEPSINQ96N21 525 aa15.46■□□□□ 0.07
LIMS2-210ENST00000413578 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-210ENST00000413578 SERPINA10Q9UK55 444 aa15.46■□□□□ 0.07
LIMS2-210ENST00000413578 MKI67P46013 3256 aaKnown RBP15.46■□□□□ 0.06
LIMS2-210ENST00000413578 POTEFA5A3E0 1075 aa15.45■□□□□ 0.06
LIMS2-210ENST00000413578 CCDC57Q2TAC2 916 aa15.45■□□□□ 0.06
LIMS2-210ENST00000413578 CDAN1Q8IWY9 1227 aa15.45■□□□□ 0.06
LIMS2-210ENST00000413578 ANKRD13AQ8IZ07 590 aa15.45■□□□□ 0.06
LIMS2-210ENST00000413578 FAM84BQ96KN1 310 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-210ENST00000413578 PTPN22Q9Y2R2 807 aa15.45■□□□□ 0.06
LIMS2-210ENST00000413578 CHMP3Q9Y3E7 222 aa15.45■□□□□ 0.06
LIMS2-210ENST00000413578 BRCA2P51587 3418 aa15.45■□□□□ 0.06
LIMS2-210ENST00000413578 UBE4AQ14139 1066 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 MFSD14BQ5SR56 506 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
LIMS2-210ENST00000413578 CD99L2Q8TCZ2 262 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 ARMC5Q96C12 935 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 ERO1AQ96HE7 468 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 KAZALD1Q96I82 304 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 MS4A4AQ96JQ5 239 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 ZNF70Q9UC06 446 aaPredicted RBP15.44■□□□□ 0.06
LIMS2-210ENST00000413578 ECM29Q5VYK3 1845 aa15.44■□□□□ 0.06
LIMS2-210ENST00000413578 ALDH1L1O75891 902 aa15.43■□□□□ 0.06
LIMS2-210ENST00000413578 TNFAIP1Q13829 316 aa15.43■□□□□ 0.06
LIMS2-210ENST00000413578 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.43■□□□□ 0.06
LIMS2-210ENST00000413578 CNNM1Q9NRU3 951 aa15.43■□□□□ 0.06
LIMS2-210ENST00000413578 PLIN1O60240 522 aa15.42■□□□□ 0.06
LIMS2-210ENST00000413578 GYG1P46976 350 aa15.42■□□□□ 0.06
LIMS2-210ENST00000413578 RBM5P52756 815 aaKnown RBP eCLIP15.42■□□□□ 0.06
LIMS2-210ENST00000413578 OTUD7BQ6GQQ9 843 aa15.42■□□□□ 0.06
LIMS2-210ENST00000413578 DZIP1LQ8IYY4 767 aaKnown RBP15.42■□□□□ 0.06
LIMS2-210ENST00000413578 OPTNQ96CV9 577 aa15.42■□□□□ 0.06
LIMS2-210ENST00000413578 SUCLG2Q96I99 432 aa15.42■□□□□ 0.06
LIMS2-210ENST00000413578 PUS3Q9BZE2 481 aaKnown RBP15.42■□□□□ 0.06
LIMS2-210ENST00000413578 TDRD3Q9H7E2 651 aaKnown RBP15.42■□□□□ 0.06
LIMS2-210ENST00000413578 TTF2Q9UNY4 1162 aaKnown RBP15.42■□□□□ 0.06
LIMS2-210ENST00000413578 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
LIMS2-210ENST00000413578 CACNA1FO60840 1977 aa15.42■□□□□ 0.06
LIMS2-210ENST00000413578 CENPFP49454 3210 aa15.41■□□□□ 0.06
LIMS2-210ENST00000413578 HIBADHP31937 336 aaKnown RBP15.41■□□□□ 0.06
LIMS2-210ENST00000413578 SP3Q02447 781 aa15.41■□□□□ 0.06
LIMS2-210ENST00000413578 GRIK5Q16478 980 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms