RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 PDLIM2Q96JY6 352 aa15.33■□□□□ 0.05
LITAF-203ENST00000413364 KIF3AQ9Y496 699 aa15.33■□□□□ 0.05
LITAF-203ENST00000413364 MROH5Q6ZUA9 1318 aa15.33■□□□□ 0.04
LITAF-203ENST00000413364 COL5A3P25940 1745 aaPredicted RBP15.33■□□□□ 0.04
LITAF-203ENST00000413364 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.33■□□□□ 0.04
LITAF-203ENST00000413364 NTSR2O95665 410 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 APPP05067 770 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 HMGB1P09429 215 aaKnown RBP15.32■□□□□ 0.04
LITAF-203ENST00000413364 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
LITAF-203ENST00000413364 FNBP4Q8N3X1 1017 aaPredicted RBP15.32■□□□□ 0.04
LITAF-203ENST00000413364 NIP7Q9Y221 180 aaKnown RBP eCLIP15.32■□□□□ 0.04
LITAF-203ENST00000413364 ZNF652Q9Y2D9 606 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 FAM177BA6PVY3 158 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 MBD3O95983 291 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 MCAMP43121 646 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
LITAF-203ENST00000413364 STOX1Q6ZVD7 989 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 CCDC39Q9UFE4 941 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 RTL9Q8NET4 1388 aa15.32■□□□□ 0.04
LITAF-203ENST00000413364 F13A1P00488 732 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 FGFR2P21802 821 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 ZNF445P59923 1031 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 PI16Q6UXB8 463 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 ZNF710Q8N1W2 664 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 LINC00116Q8NCU8 138 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 LPIN2Q92539 896 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 APPBP2Q92624 585 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 WASHC4Q2M389 1173 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 CLEC4GQ6UXB4 293 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.31■□□□□ 0.04
LITAF-203ENST00000413364 MTMR6Q9Y217 621 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 ATP6V1DQ9Y5K8 247 aa15.31■□□□□ 0.04
LITAF-203ENST00000413364 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
LITAF-203ENST00000413364 ARID4AP29374 1257 aaPredicted RBP15.3■□□□□ 0.04
LITAF-203ENST00000413364 PSEN1P49768 467 aa15.3■□□□□ 0.04
LITAF-203ENST00000413364 TTF1Q15361 905 aaPredicted RBP15.3■□□□□ 0.04
LITAF-203ENST00000413364 ZSCAN23Q3MJ62 389 aa15.3■□□□□ 0.04
LITAF-203ENST00000413364 Q6ZUG5 572 aa15.3■□□□□ 0.04
LITAF-203ENST00000413364 TMEM87AQ8NBN3 555 aa15.3■□□□□ 0.04
LITAF-203ENST00000413364 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
LITAF-203ENST00000413364 DDX60Q8IY21 1712 aaKnown RBP15.3■□□□□ 0.04
LITAF-203ENST00000413364 BCORQ6W2J9 1755 aa15.3■□□□□ 0.04
LITAF-203ENST00000413364 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 DHX32Q7L7V1 743 aaKnown RBP15.29■□□□□ 0.04
LITAF-203ENST00000413364 MPHOSPH8Q99549 860 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 CTNNA3Q9UI47 895 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 LAMB2P55268 1798 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 TULP2O00295 520 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 SLC5A1P13866 664 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 ZSCAN25Q6NSZ9 544 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 CNPY4Q8N129 248 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
LITAF-203ENST00000413364 SPATA31A6Q5VVP1 1343 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 RGL2O15211 777 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 PDCP20941 246 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 PHKA1P46020 1223 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 FOXD4L6Q3SYB3 417 aaPredicted RBP15.28■□□□□ 0.04
LITAF-203ENST00000413364 FOXD4L3Q6VB84 417 aaPredicted RBP15.28■□□□□ 0.04
LITAF-203ENST00000413364 PDCL2Q8N4E4 241 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 HELBQ8NG08 1087 aaPredicted RBP15.28■□□□□ 0.04
LITAF-203ENST00000413364 EFCC1Q9HA90 598 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 CALCOCO1Q9P1Z2 691 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 E7EWF7 191 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 FOXP2O15409 715 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 EXOSC10Q01780 885 aaKnown RBP15.28■□□□□ 0.04
LITAF-203ENST00000413364 USP48Q86UV5 1035 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 GTF3C6Q969F1 213 aa15.28■□□□□ 0.04
LITAF-203ENST00000413364 RBM27Q9P2N5 1060 aaKnown RBP15.28■□□□□ 0.04
LITAF-203ENST00000413364 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
LITAF-203ENST00000413364 A0A0G2JLW4 131 aa15.27■□□□□ 0.04
LITAF-203ENST00000413364 DTNBO60941 627 aa15.27■□□□□ 0.04
LITAF-203ENST00000413364 PTMAP06454 111 aaKnown RBP15.27■□□□□ 0.04
LITAF-203ENST00000413364 ADD2P35612 726 aa15.27■□□□□ 0.04
LITAF-203ENST00000413364 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
LITAF-203ENST00000413364 STK3Q13188 491 aa15.27■□□□□ 0.04
LITAF-203ENST00000413364 LARP1BQ659C4 914 aaKnown RBP15.27■□□□□ 0.04
LITAF-203ENST00000413364 PUS7LQ9H0K6 701 aaKnown RBP15.27■□□□□ 0.04
LITAF-203ENST00000413364 PIH1D3Q9NQM4 214 aaKnown RBP15.27■□□□□ 0.04
LITAF-203ENST00000413364 USP21Q9UK80 565 aa15.27■□□□□ 0.04
LITAF-203ENST00000413364 ATRNO75882 1429 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 MYH7P12883 1935 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 TTLL5Q6EMB2 1281 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 BRF1Q92994 677 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 AGXT2Q9BYV1 514 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 GDPD2Q9HCC8 539 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 OGFRQ9NZT2 677 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 TMEM63CQ9P1W3 806 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 CNPY2Q9Y2B0 182 aa15.27■□□□□ 0.03
LITAF-203ENST00000413364 THSD7AQ9UPZ6 1657 aa15.26■□□□□ 0.03
LITAF-203ENST00000413364 LAMA4Q16363 1823 aa15.26■□□□□ 0.03
LITAF-203ENST00000413364 VPS37CA5D8V6 355 aaPredicted RBP15.26■□□□□ 0.03
LITAF-203ENST00000413364 GPAA1O43292 621 aa15.26■□□□□ 0.03
LITAF-203ENST00000413364 FAM193AP78312 1265 aa15.26■□□□□ 0.03
LITAF-203ENST00000413364 KIAA2012Q0VF49 1180 aa15.26■□□□□ 0.03
LITAF-203ENST00000413364 UBE3CQ15386 1083 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms