RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NSFL1CQ9UNZ2 370 aaKnown RBP8.03□□□□□ -1.12
VPS41-204ENST00000413141 MYO5AQ9Y4I1 1855 aaKnown RBP8.02□□□□□ -1.12
VPS41-204ENST00000413141 RNF113AO15541 343 aaKnown RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 ZFYP08048 801 aaPredicted RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 POLD1P28340 1107 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 HIBADHP31937 336 aaKnown RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 ZMYM1Q5SVZ6 1142 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 ZNF589Q86UQ0 364 aaPredicted RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 TXNRD3Q86VQ6 643 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 VPS37DQ86XT2 251 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 TBC1D16Q8TBP0 767 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 GPR101Q96P66 508 aaPredicted RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.02□□□□□ -1.132e-7■■■□□ 17.6
VPS41-204ENST00000413141 POLLQ9UGP5 575 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 DENND2AQ9ULE3 1009 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 IQSEC3Q9UPP2 1182 aaPredicted RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 BRCA1P38398 1863 aaKnown RBP8.02□□□□□ -1.13
VPS41-204ENST00000413141 MAST3O60307 1309 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 CCDC171Q6TFL3 1326 aa8.02□□□□□ -1.13
VPS41-204ENST00000413141 PSDA5PKW4 1024 aaPredicted RBP8.01□□□□□ -1.13
VPS41-204ENST00000413141 IDH1O75874 414 aaKnown RBP8.01□□□□□ -1.13
VPS41-204ENST00000413141 ADD2P35612 726 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 SLFNL1Q499Z3 407 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 MCMDC2Q4G0Z9 681 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 ZSCAN25Q6NSZ9 544 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 OLFM4Q6UX06 510 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 ZNF804AQ7Z570 1209 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 KIF2CQ99661 725 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 SGIP1Q9BQI5 828 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 HELLSQ9NRZ9 838 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 WWC3Q9ULE0 1092 aa8.01□□□□□ -1.13
VPS41-204ENST00000413141 TCRBV5S4A2TA0A5A2 114 aa8□□□□□ -1.13
VPS41-204ENST00000413141 M0R2C6 588 aa8□□□□□ -1.13
VPS41-204ENST00000413141 DPEP1P16444 411 aa8□□□□□ -1.13
VPS41-204ENST00000413141 PDE6AP16499 860 aa8□□□□□ -1.13
VPS41-204ENST00000413141 MCCP23508 829 aa8□□□□□ -1.13
VPS41-204ENST00000413141 HSPA4P34932 840 aa8□□□□□ -1.13
VPS41-204ENST00000413141 PTH1RQ03431 593 aa8□□□□□ -1.13
VPS41-204ENST00000413141 MAP3K12Q12852 859 aa8□□□□□ -1.13
VPS41-204ENST00000413141 UBE3CQ15386 1083 aa8□□□□□ -1.13
VPS41-204ENST00000413141 WASHC4Q2M389 1173 aa8□□□□□ -1.13
VPS41-204ENST00000413141 SLC9C2Q5TAH2 1124 aa8□□□□□ -1.13
VPS41-204ENST00000413141 DPP8Q6V1X1 898 aaPredicted RBP8□□□□□ -1.13
VPS41-204ENST00000413141 CCDC129Q6ZRS4 1044 aa8□□□□□ -1.13
VPS41-204ENST00000413141 MPNDQ8N594 471 aa8□□□□□ -1.13
VPS41-204ENST00000413141 TDRD7Q8NHU6 1098 aaKnown RBP8□□□□□ -1.13
VPS41-204ENST00000413141 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
VPS41-204ENST00000413141 APPBP2Q92624 585 aa8□□□□□ -1.13
VPS41-204ENST00000413141 OSBP2Q969R2 916 aa8□□□□□ -1.13
VPS41-204ENST00000413141 IL17RAQ96F46 866 aa8□□□□□ -1.13
VPS41-204ENST00000413141 DDRGK1Q96HY6 314 aa8□□□□□ -1.13
VPS41-204ENST00000413141 SEC62Q99442 399 aaKnown RBP8□□□□□ -1.13
VPS41-204ENST00000413141 TMX4Q9H1E5 349 aaPredicted RBP8□□□□□ -1.13
VPS41-204ENST00000413141 ZNF532Q9HCE3 1301 aa8□□□□□ -1.13
VPS41-204ENST00000413141 SALL1Q9NSC2 1324 aa8□□□□□ -1.13
VPS41-204ENST00000413141 ZNF646O15015 1829 aaPredicted RBP7.99□□□□□ -1.13
VPS41-204ENST00000413141 C6orf229H3BNL8 230 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
VPS41-204ENST00000413141 IL1R1P14778 569 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 KCNA3P22001 575 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 PTGER2P43116 358 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 ANAPC15P60006 121 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 ILDR2Q71H61 639 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 TTLL6Q8N841 843 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 IPO9Q96P70 1041 aaKnown RBP7.99□□□□□ -1.13
VPS41-204ENST00000413141 RTFDC1Q9BY42 306 aaPredicted RBP7.99□□□□□ -1.13
VPS41-204ENST00000413141 CD209Q9NNX6 404 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 PALD1Q9ULE6 856 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 RBM8AQ9Y5S9 174 aaKnown RBP7.99□□□□□ -1.13
VPS41-204ENST00000413141 LAMA4Q16363 1823 aa7.99□□□□□ -1.13
VPS41-204ENST00000413141 A0A0G2JLW4 131 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 GPAA1O43292 621 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 TGFB2P61812 414 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 CHAF1AQ13111 956 aaPredicted RBP7.98□□□□□ -1.13
VPS41-204ENST00000413141 RABEP1Q15276 862 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 CC2D2BQ6DHV5 1058 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 MAGEB6Q8N7X4 407 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 MAP4K1Q92918 833 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 EYA3Q99504 573 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 DSCC1Q9BVC3 393 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 COA1Q9GZY4 146 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 PUS7LQ9H0K6 701 aaKnown RBP7.98□□□□□ -1.13
VPS41-204ENST00000413141 LRP2BPQ9P2M1 347 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 ABCF2Q9UG63 623 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 CCDC88AQ3V6T2 1871 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 TIAM2Q8IVF5 1701 aa7.98□□□□□ -1.13
VPS41-204ENST00000413141 FOXP2O15409 715 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 C21orf2O43822 256 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 IGSF3O75054 1194 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 PRDX5P30044 214 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 NECTIN1Q15223 517 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 CCDC93Q567U6 631 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 VPS53Q5VIR6 699 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 TMED8Q6PL24 325 aaPredicted RBP7.97□□□□□ -1.13
VPS41-204ENST00000413141 CHRDL2Q6WN34 429 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 ADGRA1Q86SQ6 560 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms