RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CEP126Q9P2H0 1117 aa16.35■□□□□ 0.21
SSB-203ENST00000413002 COG6Q9Y2V7 657 aa16.35■□□□□ 0.21
SSB-203ENST00000413002 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.35■□□□□ 0.21
SSB-203ENST00000413002 SASH1O94885 1247 aa16.34■□□□□ 0.21
SSB-203ENST00000413002 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
SSB-203ENST00000413002 IL15P40933 162 aaPredicted RBP16.34■□□□□ 0.21
SSB-203ENST00000413002 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
SSB-203ENST00000413002 ZC3H15Q8WU90 426 aaKnown RBP16.34■□□□□ 0.21
SSB-203ENST00000413002 ZNF408Q9H9D4 720 aa16.34■□□□□ 0.21
SSB-203ENST00000413002 GGA3Q9NZ52 723 aa16.34■□□□□ 0.21
SSB-203ENST00000413002 TMEM88BA6NKF7 163 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 ADM5C9JUS6 153 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 FRAT2O75474 233 aaPredicted RBP16.33■□□□□ 0.2
SSB-203ENST00000413002 SLC5A1P13866 664 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 TFCP2Q12800 502 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 NBPF9Q3BBW0 867 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 CAVIN4Q5BKX8 364 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 ANGEL2Q5VTE6 544 aaKnown RBP16.33■□□□□ 0.2
SSB-203ENST00000413002 OGFOD1Q8N543 542 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 LPIN2Q92539 896 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 CREBZFQ9NS37 354 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
SSB-203ENST00000413002 PCDHAC2Q9Y5I4 1007 aa16.33■□□□□ 0.2
SSB-203ENST00000413002 ZNF609O15014 1411 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 ADORA1P30542 326 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 GRIK5Q16478 980 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 CST9Q5W186 159 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 KRT26Q7Z3Y9 468 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 DCPSQ96C86 337 aaKnown RBP16.32■□□□□ 0.2
SSB-203ENST00000413002 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
SSB-203ENST00000413002 TIMM10P62072 90 aa16.31■□□□□ 0.2
SSB-203ENST00000413002 MVPQ14764 893 aaKnown RBP16.31■□□□□ 0.2
SSB-203ENST00000413002 MFSD14BQ5SR56 506 aa16.31■□□□□ 0.2
SSB-203ENST00000413002 KLRG1Q96E93 195 aa16.31■□□□□ 0.2
SSB-203ENST00000413002 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
SSB-203ENST00000413002 PSME4Q14997 1843 aa16.31■□□□□ 0.2
SSB-203ENST00000413002 FAM205AQ6ZU69 1335 aa16.3■□□□□ 0.2
SSB-203ENST00000413002 WNT10BO00744 389 aa16.3■□□□□ 0.2
SSB-203ENST00000413002 CELF2O95319 508 aaKnown RBP16.3■□□□□ 0.2
SSB-203ENST00000413002 MS4A1P11836 297 aa16.3■□□□□ 0.2
SSB-203ENST00000413002 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.25e-6■■□□□ 11.9
SSB-203ENST00000413002 POLA2Q14181 598 aa16.3■□□□□ 0.2
SSB-203ENST00000413002 HDAC9Q9UKV0 1011 aa16.3■□□□□ 0.2
SSB-203ENST00000413002 ABT1Q9ULW3 272 aaKnown RBP16.3■□□□□ 0.2
SSB-203ENST00000413002 PHKA1P46020 1223 aa16.29■□□□□ 0.2
SSB-203ENST00000413002 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
SSB-203ENST00000413002 CEP85Q6P2H3 762 aa16.29■□□□□ 0.2
SSB-203ENST00000413002 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
SSB-203ENST00000413002 AOX1Q06278 1338 aa16.28■□□□□ 0.2
SSB-203ENST00000413002 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
SSB-203ENST00000413002 SURF6O75683 361 aaKnown RBP16.28■□□□□ 0.2
SSB-203ENST00000413002 RBM5P52756 815 aaKnown RBP eCLIP16.28■□□□□ 0.2
SSB-203ENST00000413002 SULF1Q8IWU6 871 aa16.28■□□□□ 0.2
SSB-203ENST00000413002 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
SSB-203ENST00000413002 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
SSB-203ENST00000413002 FKBP1AP62942 108 aaKnown RBP16.27■□□□□ 0.2
SSB-203ENST00000413002 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
SSB-203ENST00000413002 DLGAP5Q15398 846 aa16.27■□□□□ 0.2
SSB-203ENST00000413002 CFAP100Q494V2 611 aa16.27■□□□□ 0.2
SSB-203ENST00000413002 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
SSB-203ENST00000413002 CLRN2A0PK11 232 aa16.26■□□□□ 0.19
SSB-203ENST00000413002 GRM1Q13255 1194 aa16.26■□□□□ 0.19
SSB-203ENST00000413002 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
SSB-203ENST00000413002 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
SSB-203ENST00000413002 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
SSB-203ENST00000413002 ZBED3Q96IU2 234 aaPredicted RBP16.26■□□□□ 0.19
SSB-203ENST00000413002 PRMT6Q96LA8 375 aaPredicted RBP16.26■□□□□ 0.19
SSB-203ENST00000413002 ZBTB40Q9NUA8 1239 aa16.26■□□□□ 0.19
SSB-203ENST00000413002 COL1A1P02452 1464 aaPredicted RBP16.25■□□□□ 0.19
SSB-203ENST00000413002 VEGFBP49765 207 aa16.25■□□□□ 0.19
SSB-203ENST00000413002 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
SSB-203ENST00000413002 CDCA5Q96FF9 252 aa16.25■□□□□ 0.19
SSB-203ENST00000413002 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
SSB-203ENST00000413002 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
SSB-203ENST00000413002 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
SSB-203ENST00000413002 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
SSB-203ENST00000413002 DEFB115Q30KQ5 88 aa16.24■□□□□ 0.19
SSB-203ENST00000413002 GNL3LQ9NVN8 582 aaKnown RBP16.24■□□□□ 0.19
SSB-203ENST00000413002 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
SSB-203ENST00000413002 CNTNAP1P78357 1384 aa16.24■□□□□ 0.19
SSB-203ENST00000413002 CRKP46108 304 aa16.23■□□□□ 0.19
SSB-203ENST00000413002 CYP4F22Q6NT55 531 aa16.23■□□□□ 0.19
SSB-203ENST00000413002 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
SSB-203ENST00000413002 TBC1D22AQ8WUA7 517 aa16.23■□□□□ 0.19
SSB-203ENST00000413002 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
SSB-203ENST00000413002 VEZTQ9HBM0 779 aa16.23■□□□□ 0.19
SSB-203ENST00000413002 TLL2Q9Y6L7 1015 aa16.23■□□□□ 0.19
SSB-203ENST00000413002 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
SSB-203ENST00000413002 PITPNM2Q9BZ72 1349 aa16.22■□□□□ 0.19
SSB-203ENST00000413002 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
SSB-203ENST00000413002 APBB1O00213 710 aa16.22■□□□□ 0.19
SSB-203ENST00000413002 MMP14P50281 582 aa16.22■□□□□ 0.19
SSB-203ENST00000413002 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
SSB-203ENST00000413002 GORABQ5T7V8 394 aa16.22■□□□□ 0.19
SSB-203ENST00000413002 PI16Q6UXB8 463 aa16.22■□□□□ 0.19
SSB-203ENST00000413002 MOB2Q70IA6 237 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms